; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0016526 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016526
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionvegetative cell wall protein gp1-like
Genome locationchr08:20981673..20982580
RNA-Seq ExpressionPI0016526
SyntenyPI0016526
Gene Ontology termsNA
InterPro domainsIPR044959 - Classical arabinogalactan protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036330.1 hypothetical protein E6C27_scaffold18G001290 [Cucumis melo var. makuwa]2.0e-5888.89Show/hide
Query:  MGFSGVPFLVIFAVFTTLCMAQAPVPAPGSPQPLTPPSPTPAPSPLVFPPSPTPTPNRAPSPSPTPVS-------PSPAPAVPAPAPAPIAPTPTPSSTP
        MGFSGV F+VIFA+ T LCMAQAPVPAPGSPQPLTPPS TPAPSP+V PPSPTPTPNRAPSPSPTPVS       PSPAP VPAPAPAPIAPTPTP STP
Subjt:  MGFSGVPFLVIFAVFTTLCMAQAPVPAPGSPQPLTPPSPTPAPSPLVFPPSPTPTPNRAPSPSPTPVS-------PSPAPAVPAPAPAPIAPTPTPSSTP

Query:  TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHVGGAATLGIALAGTLFAVILS
        TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASH+GGAATLGIALAGTLFAVILS
Subjt:  TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHVGGAATLGIALAGTLFAVILS

XP_022950235.1 vegetative cell wall protein gp1-like [Cucurbita moschata]7.7e-2656.42Show/hide
Query:  MGFSGVPFLVIFAVFTTLCMAQAPVPAPG----SPQPLTPPSPTPAPSPLVFPPSPTPTPNRAPSPSPTPVSPSPAPAVPAPA----------------P
        MG SGV  +VIFA+   LC AQAP P P     SP+P+ P   TPAPSP+ FPPSP+ +P RAPSPSPT  SPSPA   P+PA                P
Subjt:  MGFSGVPFLVIFAVFTTLCMAQAPVPAPG----SPQPLTPPSPTPAPSPLVFPPSPTPTPNRAPSPSPTPVSPSPAPAVPAPA----------------P

Query:  APIAPTPTPSSTPTPS----GGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHVGGAATLGIALAGTLFAVILS
        A  APTP PSS P PS    G PVVPPIASPPSP+  + PSP P+ P AD+PAGAASH+GGA TLGIA+AGTL A++++
Subjt:  APIAPTPTPSSTPTPS----GGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHVGGAATLGIALAGTLFAVILS

XP_022978568.1 vegetative cell wall protein gp1-like [Cucurbita maxima]1.1e-2758.29Show/hide
Query:  MGFSGVPFLVIFAVFTTLCMAQAPVPAPGSPQPLTPPSPTPAPSPLVFPPSPTPTPNRAPSPSPTPVSPSPAPAVPAPA----------------PAPIA
        MGFSGV  +VIFA+   LC AQAP PA  SP+P+ P   TPAPSP+ FPPSP+ +P RAPSPSPT  SPSPA   P+PA                PA  A
Subjt:  MGFSGVPFLVIFAVFTTLCMAQAPVPAPGSPQPLTPPSPTPAPSPLVFPPSPTPTPNRAPSPSPTPVSPSPAPAVPAPA----------------PAPIA

Query:  PTPTPSSTPTPS----GGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHVGGAATLGIALAGTLFAVILS
        PTP PSS P PS    G PVVPPIASPPSP+  + PSP P+ P AD+PAGAASH+GGA TLGIA+AGTL A++++
Subjt:  PTPTPSSTPTPS----GGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHVGGAATLGIALAGTLFAVILS

XP_023544207.1 vegetative cell wall protein gp1-like [Cucurbita pepo subsp. pepo]2.4e-2757.54Show/hide
Query:  MGFSGVPFLVIFAVFTTLCMAQAPVPAPG----SPQPLTPPSPTPAPSPLVFPPSPTPTPNRAPSPSPTPVSPSPAPAVPAPA----------------P
        MGFSGV  +VIFA+   LCMAQAP P P     SP+P+ P   TPAPSP+ FPP+P+ +P RAPSPSPT  SPSPA   P+PA                P
Subjt:  MGFSGVPFLVIFAVFTTLCMAQAPVPAPG----SPQPLTPPSPTPAPSPLVFPPSPTPTPNRAPSPSPTPVSPSPAPAVPAPA----------------P

Query:  APIAPTPTPSSTPTPS----GGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHVGGAATLGIALAGTLFAVILS
        A  APTP PSS P PS    G PVVPPIASPPSP+  E PSP P+ P AD+PAGAASH+GGA TLGIA+AGTL A++++
Subjt:  APIAPTPTPSSTPTPS----GGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHVGGAATLGIALAGTLFAVILS

XP_038881138.1 vegetative cell wall protein gp1-like [Benincasa hispida]4.4e-4577.78Show/hide
Query:  MGFSGVPFLVIFAVFTTLCMAQAPVPAPGSPQPLTPPSPTPAPSPLVFPPSPTPTPNRAP-------SPSPTPVSPSPAPAVPAPAPAPIAPTPTPSSTP
        MGFSGV ++VIFA+ T LCMAQAP PAPGS QPL P   TPAPSP+VFPPSPTPTPNRAP       SPSP P +PSPAPAVPAPAPA  APTP PSS+ 
Subjt:  MGFSGVPFLVIFAVFTTLCMAQAPVPAPGSPQPLTPPSPTPAPSPLVFPPSPTPTPNRAP-------SPSPTPVSPSPAPAVPAPAPAPIAPTPTPSSTP

Query:  TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHVGGAATLGIALAGTLFAVILS
        TPSGGPVVPPIASPPSPTGIEVPS APQ P ADNPAGAASH+GGAA  GIA+AGTLFAVIL+
Subjt:  TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHVGGAATLGIALAGTLFAVILS

TrEMBL top hitse value%identityAlignment
A0A0A0KG74 Uncharacterized protein1.7e-5586.45Show/hide
Query:  MGFSGVPFLVIFAVFTTLCMAQAPVPAPGSPQPLTPPSPTPAPSPLVFPPSPTPTPNRAPSPSPTPVSPSPAPAVPAPAPAPIAPTPTPSSTPTPSGGPV
        MGFSGV F++IFA+ T LCMAQAP PAPGSPQPLTPPS TPAPSP+V PPSPTPTPNRAPSPSPTPVSPSPAP   +PAPAPIAPTPTP STPTPSGGPV
Subjt:  MGFSGVPFLVIFAVFTTLCMAQAPVPAPGSPQPLTPPSPTPAPSPLVFPPSPTPTPNRAPSPSPTPVSPSPAPAVPAPAPAPIAPTPTPSSTPTPSGGPV

Query:  VPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHVGGAATLGIALAGTLFAVILS
        +PPIASPPSPTG+EVPSPAPQGP ADNPAGA SH+GGAATLGIALAGTLF VILS
Subjt:  VPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHVGGAATLGIALAGTLFAVILS

A0A5D3CNQ6 Uncharacterized protein9.8e-5988.89Show/hide
Query:  MGFSGVPFLVIFAVFTTLCMAQAPVPAPGSPQPLTPPSPTPAPSPLVFPPSPTPTPNRAPSPSPTPVS-------PSPAPAVPAPAPAPIAPTPTPSSTP
        MGFSGV F+VIFA+ T LCMAQAPVPAPGSPQPLTPPS TPAPSP+V PPSPTPTPNRAPSPSPTPVS       PSPAP VPAPAPAPIAPTPTP STP
Subjt:  MGFSGVPFLVIFAVFTTLCMAQAPVPAPGSPQPLTPPSPTPAPSPLVFPPSPTPTPNRAPSPSPTPVS-------PSPAPAVPAPAPAPIAPTPTPSSTP

Query:  TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHVGGAATLGIALAGTLFAVILS
        TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASH+GGAATLGIALAGTLFAVILS
Subjt:  TPSGGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHVGGAATLGIALAGTLFAVILS

A0A6J1GF55 vegetative cell wall protein gp1-like3.7e-2656.42Show/hide
Query:  MGFSGVPFLVIFAVFTTLCMAQAPVPAPG----SPQPLTPPSPTPAPSPLVFPPSPTPTPNRAPSPSPTPVSPSPAPAVPAPA----------------P
        MG SGV  +VIFA+   LC AQAP P P     SP+P+ P   TPAPSP+ FPPSP+ +P RAPSPSPT  SPSPA   P+PA                P
Subjt:  MGFSGVPFLVIFAVFTTLCMAQAPVPAPG----SPQPLTPPSPTPAPSPLVFPPSPTPTPNRAPSPSPTPVSPSPAPAVPAPA----------------P

Query:  APIAPTPTPSSTPTPS----GGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHVGGAATLGIALAGTLFAVILS
        A  APTP PSS P PS    G PVVPPIASPPSP+  + PSP P+ P AD+PAGAASH+GGA TLGIA+AGTL A++++
Subjt:  APIAPTPTPSSTPTPS----GGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHVGGAATLGIALAGTLFAVILS

A0A6J1HFR1 vegetative cell wall protein gp1-like1.3e-1548.39Show/hide
Query:  MGFSGVPFLVIFAVFTTLCMAQAPVPAPGSPQPLTPPSPTPAPSPLVFPPSPTPTPNRAPSPSPTPVSPSPAPAVPAPAPAPIAPTPTPSSTPTPSGGPV
        MGFSGV F+++ A+    CMAQA             P+P PAP+P + P  P P     P+ S TP SP+PAP   AP PAPI P      + +P+GGPV
Subjt:  MGFSGVPFLVIFAVFTTLCMAQAPVPAPGSPQPLTPPSPTPAPSPLVFPPSPTPTPNRAPSPSPTPVSPSPAPAVPAPAPAPIAPTPTPSSTPTPSGGPV

Query:  VPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHVGGAATLGIALAGTLFAVILS
        VP +ASP        PS AP+GPPAD P GAAS +GGA TLG+A+AG+L AV+L+
Subjt:  VPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHVGGAATLGIALAGTLFAVILS

A0A6J1ITI1 vegetative cell wall protein gp1-like5.2e-2858.29Show/hide
Query:  MGFSGVPFLVIFAVFTTLCMAQAPVPAPGSPQPLTPPSPTPAPSPLVFPPSPTPTPNRAPSPSPTPVSPSPAPAVPAPA----------------PAPIA
        MGFSGV  +VIFA+   LC AQAP PA  SP+P+ P   TPAPSP+ FPPSP+ +P RAPSPSPT  SPSPA   P+PA                PA  A
Subjt:  MGFSGVPFLVIFAVFTTLCMAQAPVPAPGSPQPLTPPSPTPAPSPLVFPPSPTPTPNRAPSPSPTPVSPSPAPAVPAPA----------------PAPIA

Query:  PTPTPSSTPTPS----GGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHVGGAATLGIALAGTLFAVILS
        PTP PSS P PS    G PVVPPIASPPSP+  + PSP P+ P AD+PAGAASH+GGA TLGIA+AGTL A++++
Subjt:  PTPTPSSTPTPS----GGPVVPPIASPPSPTGIEVPSPAPQGPPADNPAGAASHVGGAATLGIALAGTLFAVILS

SwissProt top hitse value%identityAlignment
O10341 Uncharacterized 29.3 kDa protein2.9e-0752.17Show/hide
Query:  TLCMAQAPVPAPGSPQPLTPPSPTPAPSPLVFPPSPTPTPNRAPSPSPTPVSPSPAPAVPAPAPAPIAPTPTPSSTPTPSGGPVVPPIASP-PSPTGIEV
        TL    +P P P SP P   PSPTP PSP    PSPTPTP+  PSP+PTP SP+P P+ P P+P P +PTPTPS TP+P+  P   P  +P PSPT    
Subjt:  TLCMAQAPVPAPGSPQPLTPPSPTPAPSPLVFPPSPTPTPNRAPSPSPTPVSPSPAPAVPAPAPAPIAPTPTPSSTPTPSGGPVVPPIASP-PSPTGIEV

Query:  PSPAPQGPPADNPAG
        P P+P  PP+ +P G
Subjt:  PSPAPQGPPADNPAG

P41479 Uncharacterized 24.1 kDa protein in LEF4-P33 intergenic region3.0e-0447.75Show/hide
Query:  VPAPGSPQ--PLTPPSPTPAPSPLVFPPSPTP-TPNRAPSPSPTPVSPSPAPAVPAPAPAPIAPTPTPSSTPT---PSGGPVVPPIASPPSPTGIEVPSP
        VP P SP   PL  P PTP PSP    P PTP  P   P+P PTP+ P+P    P P P+PI PTPTPS  P+   P+  P  PP   PP+PT    PSP
Subjt:  VPAPGSPQ--PLTPPSPTPAPSPLVFPPSPTP-TPNRAPSPSPTPVSPSPAPAVPAPAPAPIAPTPTPSSTPT---PSGGPVVPPIASPPSPTGIEVPSP

Query:  APQGPPADNPA
        +P G P   P+
Subjt:  APQGPPADNPA

Q9FPQ6 Vegetative cell wall protein gp11.6e-0548.54Show/hide
Query:  PVPAPGSPQPLTPPSPTPAPSPLVFPPSPTPTPNRAPSPSPTPVSPSPAPAVPAPAPAPIAPTPTPSSTPTPSGGPVVPPIASP-PSPTGIEVPSPAPQG
        P PA  +P P +PPSP P+P+P   P  P+P+P     PSP PV PSPAP  PAP+P P    PTPS +P+PS  P   P  SP PSP+   +PSP+P+ 
Subjt:  PVPAPGSPQPLTPPSPTPAPSPLVFPPSPTPTPNRAPSPSPTPVSPSPAPAVPAPAPAPIAPTPTPSSTPTPSGGPVVPPIASP-PSPTGIEVPSPAPQG

Query:  PPA
         P+
Subjt:  PPA

Arabidopsis top hitse value%identityAlignment
AT3G19430.1 late embryogenesis abundant protein-related / LEA protein-related8.9e-0448.6Show/hide
Query:  APVPAPGSPQPLTPPSPTPAPSPLVFPPSPTPTPNRAPSPSP--TPVSPSPAPAVPAPAP--APIAPTPTPSSTPTPSGGPVVP--PIASPPSPTGIEVP
        +P P P SP P TP    P+P+P V PP PTPTP+  PSP+P  +P  P+P P+VP+P P  +P  PTPTPS    PS  P VP  P+ SPP P     P
Subjt:  APVPAPGSPQPLTPPSPTPAPSPLVFPPSPTPTPNRAPSPSP--TPVSPSPAPAVPAPAP--APIAPTPTPSSTPTPSGGPVVP--PIASPPSPTGIEVP

Query:  SPAPQGP
        +P P  P
Subjt:  SPAPQGP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTCTCCGGGGTTCCATTCCTTGTGATTTTTGCTGTCTTCACGACCTTATGTATGGCTCAGGCGCCGGTGCCAGCACCGGGTTCTCCACAGCCTCTAACTCCTCC
ATCACCCACACCGGCGCCTTCTCCCCTCGTTTTCCCTCCATCTCCAACTCCAACGCCAAACAGAGCACCATCGCCTTCACCGACTCCGGTATCGCCCTCACCCGCACCAG
CGGTACCTGCTCCAGCTCCTGCGCCTATTGCTCCTACCCCAACTCCAAGCTCTACTCCTACTCCTTCCGGTGGTCCTGTAGTTCCACCCATTGCTTCTCCTCCATCACCT
ACCGGAATCGAGGTGCCTTCACCAGCACCTCAAGGCCCGCCGGCCGATAACCCAGCTGGAGCGGCGTCGCACGTCGGCGGAGCAGCGACGTTGGGGATCGCTTTGGCTGG
CACTCTGTTTGCAGTGATTTTATCGTAG
mRNA sequenceShow/hide mRNA sequence
AGCAAAGTGAATTCTGTGAGCGAATTCTTCCTTTCTAACACGCGCTCCTTTCCCTCTTCTACTTTCACTACCTTCTCCGAGGTTCTCTGTTTTCAGGAAAATTAATATTT
TCCCTTTTTCTTCCGATAAAAAGACGATGGGATTCTCCGGGGTTCCATTCCTTGTGATTTTTGCTGTCTTCACGACCTTATGTATGGCTCAGGCGCCGGTGCCAGCACCG
GGTTCTCCACAGCCTCTAACTCCTCCATCACCCACACCGGCGCCTTCTCCCCTCGTTTTCCCTCCATCTCCAACTCCAACGCCAAACAGAGCACCATCGCCTTCACCGAC
TCCGGTATCGCCCTCACCCGCACCAGCGGTACCTGCTCCAGCTCCTGCGCCTATTGCTCCTACCCCAACTCCAAGCTCTACTCCTACTCCTTCCGGTGGTCCTGTAGTTC
CACCCATTGCTTCTCCTCCATCACCTACCGGAATCGAGGTGCCTTCACCAGCACCTCAAGGCCCGCCGGCCGATAACCCAGCTGGAGCGGCGTCGCACGTCGGCGGAGCA
GCGACGTTGGGGATCGCTTTGGCTGGCACTCTGTTTGCAGTGATTTTATCGTAGACGTTGATGCGTTGGGTCAATTTAGAGATCTAAATTTGGAGGTGAATTGGAGTGAT
GGCTGATGGAATTCTTTTGCTTTTTTTTTTTTTTTTTTTTTTTAAATCTCTTTCCCACACTACTACTGCCTTCATATAATTTCATTGTTATTATTATTATCTTAATGTTG
GAGATTTTAGGGAGTTGTGTTTTGTAATTTTGATAGTTTTGGTTACTTTTTAGTATTCATTATTGTTCTTCGGTTGATTATATTTGAATTCTTTGTAGATCGGATTAGTG
ATGAATAAGAGCTTTTTCTTTTCTTTTA
Protein sequenceShow/hide protein sequence
MGFSGVPFLVIFAVFTTLCMAQAPVPAPGSPQPLTPPSPTPAPSPLVFPPSPTPTPNRAPSPSPTPVSPSPAPAVPAPAPAPIAPTPTPSSTPTPSGGPVVPPIASPPSP
TGIEVPSPAPQGPPADNPAGAASHVGGAATLGIALAGTLFAVILS