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PI0016536 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016536
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionArabinogalactan peptide 22
Genome locationchr06:7829623..7831019
RNA-Seq ExpressionPI0016536
SyntenyPI0016536
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009424 - Arabinogalactan protein 16/20/22/41


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN57863.1 hypothetical protein Csa_009896 [Cucumis sativus]2.1e-2090Show/hide
Query:  MAFLRASCFGIYAAVLIAVFYVVALPVSSAELSSSS--PAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        MA LRASCFGIYAA+LIAVFYVVALP+SSA+LSSSS  PAPAPTSDGT IDQGIAYVLMLVALVLTYIIH
Subjt:  MAFLRASCFGIYAAVLIAVFYVVALPVSSAELSSSS--PAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

TYK03143.1 arabinogalactan peptide 22 [Cucumis melo var. makuwa]1.9e-2195.59Show/hide
Query:  MAFLRASCFGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        MA LRASCFGIYAAVLIAVFYV+ALPVSSAEL SSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
Subjt:  MAFLRASCFGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

XP_008465391.1 PREDICTED: arabinogalactan peptide 22 [Cucumis melo]1.6e-2094.12Show/hide
Query:  MAFLRASCFGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        MA LRASCFGIYAAVLIAVFYV+AL VSSAEL SSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
Subjt:  MAFLRASCFGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

XP_022945187.1 arabinogalactan peptide 22-like [Cucurbita moschata]5.1e-1479.41Show/hide
Query:  MAFLRASCFGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        MA LRA CFGIY AV+IA+FYVV LPVS AE  +SSPAPAPTSDGT IDQGIAY+LML+AL LTYIIH
Subjt:  MAFLRASCFGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

XP_038898060.1 arabinogalactan protein 41-like [Benincasa hispida]5.8e-1888.24Show/hide
Query:  MAFLRASCFGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        MA L+A CFGIYAAV+IAVFYVV LPVS+AE  SSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
Subjt:  MAFLRASCFGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

TrEMBL top hitse value%identityAlignment
A0A0A0L7T5 Uncharacterized protein1.0e-2090Show/hide
Query:  MAFLRASCFGIYAAVLIAVFYVVALPVSSAELSSSS--PAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        MA LRASCFGIYAA+LIAVFYVVALP+SSA+LSSSS  PAPAPTSDGT IDQGIAYVLMLVALVLTYIIH
Subjt:  MAFLRASCFGIYAAVLIAVFYVVALPVSSAELSSSS--PAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

A0A1S3CNS5 arabinogalactan peptide 227.9e-2194.12Show/hide
Query:  MAFLRASCFGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        MA LRASCFGIYAAVLIAVFYV+AL VSSAEL SSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
Subjt:  MAFLRASCFGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

A0A5A7U3P4 Arabinogalactan peptide 227.9e-2194.12Show/hide
Query:  MAFLRASCFGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        MA LRASCFGIYAAVLIAVFYV+AL VSSAEL SSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
Subjt:  MAFLRASCFGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

A0A5D3BTZ5 Arabinogalactan peptide 229.3e-2295.59Show/hide
Query:  MAFLRASCFGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        MA LRASCFGIYAAVLIAVFYV+ALPVSSAEL SSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
Subjt:  MAFLRASCFGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

A0A6J1G081 arabinogalactan peptide 22-like2.5e-1479.41Show/hide
Query:  MAFLRASCFGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        MA LRA CFGIY AV+IA+FYVV LPVS AE  +SSPAPAPTSDGT IDQGIAY+LML+AL LTYIIH
Subjt:  MAFLRASCFGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

SwissProt top hitse value%identityAlignment
O82337 Arabinogalactan protein 163.9e-0968.75Show/hide
Query:  YVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        +V A+ +S A   S +PAPAPTSDGT+IDQGIAY+LM+VALVLTY+IH
Subjt:  YVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

Q8L9T8 Arabinogalactan protein 414.2e-1161.67Show/hide
Query:  FGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        FG+  + ++++ + + LP++ A+  S++PAPAPTSDGTTIDQGIAYVLMLVALVLTY+IH
Subjt:  FGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

Q9FK16 Arabinogalactan protein 222.3e-0960Show/hide
Query:  FGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        F +    +  +  V+ LP+  A+  SSSPAPAPTSDGT+IDQGIAYVLM+VAL LTY IH
Subjt:  FGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

Q9M373 Arabinogalactan protein 205.7e-0855.56Show/hide
Query:  ASCFGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        AS   +    L A  + V  P + A+  S +PAP+PTSDGT+IDQGIAY+LM+VALVLTY+IH
Subjt:  ASCFGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

Arabidopsis top hitse value%identityAlignment
AT2G46330.1 arabinogalactan protein 162.8e-1068.75Show/hide
Query:  YVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        +V A+ +S A   S +PAPAPTSDGT+IDQGIAY+LM+VALVLTY+IH
Subjt:  YVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

AT3G61640.1 arabinogalactan protein 204.0e-0955.56Show/hide
Query:  ASCFGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        AS   +    L A  + V  P + A+  S +PAP+PTSDGT+IDQGIAY+LM+VALVLTY+IH
Subjt:  ASCFGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

AT5G24105.1 arabinogalactan protein 413.0e-1261.67Show/hide
Query:  FGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        FG+  + ++++ + + LP++ A+  S++PAPAPTSDGTTIDQGIAYVLMLVALVLTY+IH
Subjt:  FGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH

AT5G53250.1 arabinogalactan protein 221.6e-1060Show/hide
Query:  FGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH
        F +    +  +  V+ LP+  A+  SSSPAPAPTSDGT+IDQGIAYVLM+VAL LTY IH
Subjt:  FGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTTTTGAGGGCTTCTTGTTTTGGAATCTATGCTGCTGTGCTTATTGCTGTCTTTTATGTTGTTGCTTTGCCTGTATCTTCGGCTGAACTTTCTTCTTCTTCTCC
AGCTCCAGCTCCAACTAGTGATGGAACCACAATAGACCAAGGAATAGCATATGTTCTAATGCTGGTGGCTTTAGTGCTAACTTATATCATCCACTGA
mRNA sequenceShow/hide mRNA sequence
CTTGTCAGTTTTGAACCTTAGAATTCCAAATTATAACACAAAAACAGAAGGAACCATGGACCATATTGTTTAGACACAATCATAAACAGCCACAAGATTGGTGTAAAGGG
TTCCAGCACAAAAGAAAAAGAAGCCAAAAATAGTGAAGAAACTTTGCCAGCAAAGGATTGAGTTCCAGCACAATCAACTTAACAGTCTGTCTATCCAGCACAGCAAAAGC
ATAAAAAATAAGGAATCTTTACAAAGAGAGAATGAAGAATCACATGGGTTTGCTTGGATTTCCAAAGCTTACGGTTCAAATATAAACAGTATTAAATCCCCAATTCCTCC
ATTTCCATTCTTGTCATTCATAATCTTCAAAATTTCTTCTTCTTGTTCTCCTGTCTCTCTCTAGGGTTCTTCTGAGAGAGACAGAGATGGCTTTTTTGAGGGCTTCTTGT
TTTGGAATCTATGCTGCTGTGCTTATTGCTGTCTTTTATGTTGTTGCTTTGCCTGTATCTTCGGCTGAACTTTCTTCTTCTTCTCCAGCTCCAGCTCCAACTAGTGATGG
AACCACAATAGACCAAGGAATAGCATATGTTCTAATGCTGGTGGCTTTAGTGCTAACTTATATCATCCACTGAAAAAACAGAAGAACAATTATTATGAATTTCATTATTT
TCAAGTCTATGAGATGAAAGGAAAGAGGGTGTGGTTGTCTTATTCTATATATTTGCCATTTTTTCTTTTCTTTTTTCTTTTGAAGATTGGCAAAGGTTTCATTTGTAGAA
AGTGATCTGTTGTATTTGTATTATAATTTATTTATATATTTTTCATTCTTTTTCTTGAA
Protein sequenceShow/hide protein sequence
MAFLRASCFGIYAAVLIAVFYVVALPVSSAELSSSSPAPAPTSDGTTIDQGIAYVLMLVALVLTYIIH