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PI0016540 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016540
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUnknown protein
Genome locationchr01:3301065..3307381
RNA-Seq ExpressionPI0016540
SyntenyPI0016540
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN43555.2 hypothetical protein Csa_020416, partial [Cucumis sativus]2.4e-1793.48Show/hide
Query:  IVCIIRLRWRPCLCPHLVRGYNLQRNEISIELKLPFKWNSRLKSLP
        +VCIIRLRWRPCLCPHLVRGYNLQR+EIS+ELKLPFKWNSRLKSLP
Subjt:  IVCIIRLRWRPCLCPHLVRGYNLQRNEISIELKLPFKWNSRLKSLP
TrEMBL top hitse value%identityAlignment
A0A0A0LF24 Uncharacterized protein1.8e-1861.8Show/hide
Query:  MLGITASVLMLQVKSLHINVSRYILLSLNFSSAEEVDLFNFVQIVCIIRLRWRPCLCPHLVRGYNLQRNEISIELKLPFKWNSRLKSLP
        MLGITASVLML                               Q+VCIIRLRWRPCLCPHLVRGYNLQR+EIS+ELKLPFKWNSRLKSLP
Subjt:  MLGITASVLMLQVKSLHINVSRYILLSLNFSSAEEVDLFNFVQIVCIIRLRWRPCLCPHLVRGYNLQRNEISIELKLPFKWNSRLKSLP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAGGAATTACTGCATCAGTGCTCATGTTGCAAGTAAAATCTCTTCATATTAATGTTTCACGTTATATTTTATTGTCTTTGAATTTCTCTAGCGCTGAGGAGGTTGA
TTTATTCAATTTTGTGCAGATCGTCTGTATTATAAGATTAAGATGGCGGCCTTGTCTTTGTCCCCATCTTGTTAGGGGATATAATTTGCAAAGGAATGAAATTTCAATAG
AGCTTAAGCTACCATTTAAATGGAATTCACGACTAAAGTCACTTCCAGGGACCAGCAATTCAATTGAACTTATGTGGGAGCAACATCTTAACAATCATCAGAAACATGCA
TTGGGTGGATGGCTGGAGATCTCACACTGCCCTACACATTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTAGGAATTACTGCATCAGTGCTCATGTTGCAAGTAAAATCTCTTCATATTAATGTTTCACGTTATATTTTATTGTCTTTGAATTTCTCTAGCGCTGAGGAGGTTGA
TTTATTCAATTTTGTGCAGATCGTCTGTATTATAAGATTAAGATGGCGGCCTTGTCTTTGTCCCCATCTTGTTAGGGGATATAATTTGCAAAGGAATGAAATTTCAATAG
AGCTTAAGCTACCATTTAAATGGAATTCACGACTAAAGTCACTTCCAGGGACCAGCAATTCAATTGAACTTATGTGGGAGCAACATCTTAACAATCATCAGAAACATGCA
TTGGGTGGATGGCTGGAGATCTCACACTGCCCTACACATTATTAGTCTCTCTTCTCTAAGTTTGATGGTGAGCTTCAAACCAATTAAACAAACACTCGTTAAAATATTAC
AGATCCAGGCCAGCAACAAGAAGAAGAAGAAGAAGAAAAAGAAAAAAAAGGTGGATTTTGGGTTGGTAGATGGTGGGCAAAAGAGCAGAACCAGAAAAAGGATTAGGTGG
GGGTTTGTGCAGAGAAGGCGTAAGCAATGAGAGTGGGTGCTGGAAAATGGCAGCCTTGGGTTGCTGTTCAAGTTTTCAAAAAGTGCACAAAACCAAAACTCCCATTGCAA
GACAGGCATCTTTTCTTTTCTTTCTTTCTTCTATGGCTACAATTCTTCTCTTCTAAACAACCAATGCTCTCCTCCTAAACTTGCACATCAATTTTGCAGGATTCTTAATT
CCCTCACCCTCTTTCTTTTTCTTCAGATTGTGGATTTGCATATGTTTAGGAATGCCACGTATCCCGTGGCGTACTGTATTAGAGTCTTGTTAAATACAATCTTAAGTTTA
TGGTAACCAAATTATATGAG
Protein sequenceShow/hide protein sequence
MLGITASVLMLQVKSLHINVSRYILLSLNFSSAEEVDLFNFVQIVCIIRLRWRPCLCPHLVRGYNLQRNEISIELKLPFKWNSRLKSLPGTSNSIELMWEQHLNNHQKHA
LGGWLEISHCPTHY