; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0016552 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016552
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr12:9904529..9904879
RNA-Seq ExpressionPI0016552
SyntenyPI0016552
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]6.0e-2365.43Show/hide
Query:  NNRNAPPSHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYLVFSKNASFEIKPVMLQMIQNVGQFGGHPGEDPYENI
        NN+N P      E N AY+AHDLD+PI+SYA+PNLY+FNPGIAYL F +N  FEIK +ML M QN GQFGGHP EDPY++I
Subjt:  NNRNAPPSHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYLVFSKNASFEIKPVMLQMIQNVGQFGGHPGEDPYENI

KAA0060833.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]9.9e-1852.48Show/hide
Query:  MSDGEQPQFELDPEIERTFRRNRRRARQRQ---ARRMENNRNAPPSHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYLVFSKNASFEIKPVMLQM
        MS+GEQP+F +D EIER F+RNRR+ ++RQ       +NN+ AP + A    N  Y+AH+ DRPIRS  +PNLY FNPGI Y  F +N  F+IKPVML +
Subjt:  MSDGEQPQFELDPEIERTFRRNRRRARQRQ---ARRMENNRNAPPSHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYLVFSKNASFEIKPVMLQM

Query:  I
        +
Subjt:  I

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]4.0e-1960.98Show/hide
Query:  ENNRNAPPSHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYLVFSKNASFEIKPVMLQMIQNVGQFGGHPGEDPYENI
        +NN+  P + AA   N  Y+A D DRPIRSYA+PNLY+FNPGIAY  FS+N  FEIK VMLQ+IQN GQF  HP +DP++ I
Subjt:  ENNRNAPPSHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYLVFSKNASFEIKPVMLQMIQNVGQFGGHPGEDPYENI

TYK08803.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]9.9e-1852.48Show/hide
Query:  MSDGEQPQFELDPEIERTFRRNRRRARQRQ---ARRMENNRNAPPSHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYLVFSKNASFEIKPVMLQM
        MS+GEQP+F +D EIER F+RNRR+ ++RQ       +NN+ AP + A    N  Y+AH+ DRPIRS  +PNLY FNPGI Y  F +N  F+IKPVML +
Subjt:  MSDGEQPQFELDPEIERTFRRNRRRARQRQ---ARRMENNRNAPPSHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYLVFSKNASFEIKPVMLQM

Query:  I
        +
Subjt:  I

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]1.1e-2146.27Show/hide
Query:  MSDGEQPQFELDPEIERTFRRNRRRARQRQARR-----MENNRNAPPS-------------HAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYLVF
        MS+G+ P F++DPEIERTFRR  R+ +QR++ +     M+   N P +             HA  + N   +AHD +RP+R YA+PNLYNF PGI    F
Subjt:  MSDGEQPQFELDPEIERTFRRNRRRARQRQARR-----MENNRNAPPS-------------HAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYLVF

Query:  SKNASFEIKPVMLQMIQNVGQFGGHPGEDPYENI
          N  FE+KPVMLQM+Q  GQFGG  GEDP+ ++
Subjt:  SKNASFEIKPVMLQMIQNVGQFGGHPGEDPYENI

TrEMBL top hitse value%identityAlignment
A0A5A7UDN8 Uncharacterized protein2.9e-2365.43Show/hide
Query:  NNRNAPPSHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYLVFSKNASFEIKPVMLQMIQNVGQFGGHPGEDPYENI
        NN+N P      E N AY+AHDLD+PI+SYA+PNLY+FNPGIAYL F +N  FEIK +ML M QN GQFGGHP EDPY++I
Subjt:  NNRNAPPSHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYLVFSKNASFEIKPVMLQMIQNVGQFGGHPGEDPYENI

A0A5A7UXZ2 Retrovirus-related Pol polyprotein from transposon 17.64.8e-1852.48Show/hide
Query:  MSDGEQPQFELDPEIERTFRRNRRRARQRQ---ARRMENNRNAPPSHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYLVFSKNASFEIKPVMLQM
        MS+GEQP+F +D EIER F+RNRR+ ++RQ       +NN+ AP + A    N  Y+AH+ DRPIRS  +PNLY FNPGI Y  F +N  F+IKPVML +
Subjt:  MSDGEQPQFELDPEIERTFRRNRRRARQRQ---ARRMENNRNAPPSHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYLVFSKNASFEIKPVMLQM

Query:  I
        +
Subjt:  I

A0A5A7V2U7 Putative disease resistance RPP13-like protein 11.9e-1960.98Show/hide
Query:  ENNRNAPPSHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYLVFSKNASFEIKPVMLQMIQNVGQFGGHPGEDPYENI
        +NN+  P + AA   N  Y+A D DRPIRSYA+PNLY+FNPGIAY  FS+N  FEIK VMLQ+IQN GQF  HP +DP++ I
Subjt:  ENNRNAPPSHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYLVFSKNASFEIKPVMLQMIQNVGQFGGHPGEDPYENI

A0A5D3BVN1 Putative disease resistance RPP13-like protein 13.1e-1757.83Show/hide
Query:  NNRNAPPSHAAL--EPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYLVFSKNASFEIKPVMLQMIQNVGQFGGHPGEDPYENI
        N  N  P ++A   + N   +AH+LD PIR+Y + NLY+FN GIAYLVF +NA FE+KPVMLQMIQ  GQF G+ GEDP+E+I
Subjt:  NNRNAPPSHAAL--EPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYLVFSKNASFEIKPVMLQMIQNVGQFGGHPGEDPYENI

A0A5D3CAB5 Retrovirus-related Pol polyprotein from transposon 17.64.8e-1852.48Show/hide
Query:  MSDGEQPQFELDPEIERTFRRNRRRARQRQ---ARRMENNRNAPPSHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYLVFSKNASFEIKPVMLQM
        MS+GEQP+F +D EIER F+RNRR+ ++RQ       +NN+ AP + A    N  Y+AH+ DRPIRS  +PNLY FNPGI Y  F +N  F+IKPVML +
Subjt:  MSDGEQPQFELDPEIERTFRRNRRRARQRQ---ARRMENNRNAPPSHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYLVFSKNASFEIKPVMLQM

Query:  I
        +
Subjt:  I

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGACGGTGAACAACCGCAATTCGAGCTTGACCCTGAAATTGAGCGAACATTTCGACGTAATCGGCGAAGAGCGAGGCAGAGACAAGCTAGAAGAATGGAAAACAA
CAGAAATGCCCCTCCGTCGCATGCTGCCCTAGAACCAAATGCCGCCTACATGGCGCACGACTTGGATAGGCCGATTAGATCTTATGCGGCACCCAACCTCTACAACTTCA
ACCCAGGGATCGCTTACCTTGTGTTTAGCAAAAACGCTAGCTTTGAAATCAAACCTGTCATGCTTCAGATGATTCAGAACGTCGGACAATTTGGCGGTCATCCTGGGGAG
GATCCATACGAGAACATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTGACGGTGAACAACCGCAATTCGAGCTTGACCCTGAAATTGAGCGAACATTTCGACGTAATCGGCGAAGAGCGAGGCAGAGACAAGCTAGAAGAATGGAAAACAA
CAGAAATGCCCCTCCGTCGCATGCTGCCCTAGAACCAAATGCCGCCTACATGGCGCACGACTTGGATAGGCCGATTAGATCTTATGCGGCACCCAACCTCTACAACTTCA
ACCCAGGGATCGCTTACCTTGTGTTTAGCAAAAACGCTAGCTTTGAAATCAAACCTGTCATGCTTCAGATGATTCAGAACGTCGGACAATTTGGCGGTCATCCTGGGGAG
GATCCATACGAGAACATTTAG
Protein sequenceShow/hide protein sequence
MSDGEQPQFELDPEIERTFRRNRRRARQRQARRMENNRNAPPSHAALEPNAAYMAHDLDRPIRSYAAPNLYNFNPGIAYLVFSKNASFEIKPVMLQMIQNVGQFGGHPGE
DPYENI