; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0016561 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016561
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCytochrome b6-f complex subunit 7
Genome locationchr01:176982..180816
RNA-Seq ExpressionPI0016561
SyntenyPI0016561
Gene Ontology termsGO:0009512 - cytochrome b6f complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR012595 - PetM of cytochrome b6/f complex subunit 7


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136999.1 uncharacterized protein LOC101210164 [Cucumis sativus]3.9e-6272.06Show/hide
Query:  MNHPNSSYLIHFPPSSFSLQSLLFPHP----ILNLIIFNFFFHSGSIPSLFSLKIHFSHLGFHSILTLPSLPLLSGIIPMATASATLSPAMSTAAPIAAG
        MNHPNSSYLIH    SFS+Q+L  P P    I +LI FNF FHSG+                               IPMATASATLS AMS+AAPI+AG
Subjt:  MNHPNSSYLIHFPPSSFSLQSLLFPHP----ILNLIIFNFFFHSGSIPSLFSLKIHFSHLGFHSILTLPSLPLLSGIIPMATASATLSPAMSTAAPIAAG

Query:  SRRQRQTNVHYITGLNSFGGLKAHNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASV
        SRRQRQTN H+I+GLNSF GLKAHN VVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASV
Subjt:  SRRQRQTNVHYITGLNSFGGLKAHNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASV

Query:  EEAE
        EEAE
Subjt:  EEAE

XP_008454894.1 PREDICTED: uncharacterized protein LOC103495201 [Cucumis melo]9.3e-5698.4Show/hide
Query:  MATASATLSPAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
        MATASATLS AMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHN VVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
Subjt:  MATASATLSPAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII

Query:  NGLVLIGVAVGFVLLRIEASVEEAE
        NGLVLIGVAVGFVLLRIEASVEEAE
Subjt:  NGLVLIGVAVGFVLLRIEASVEEAE

XP_022972366.1 uncharacterized protein LOC111470941 [Cucurbita maxima]1.1e-5394.35Show/hide
Query:  ATASATLSPAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN
        ATASATLSPA+STAAPIAAGSRRQR TNVHYITGLNSFGGLKAHN + SLGLPVCADQSFA IVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN
Subjt:  ATASATLSPAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN

Query:  GLVLIGVAVGFVLLRIEASVEEAE
        GLVL+GVAVGFVLLRIEASVEEAE
Subjt:  GLVLIGVAVGFVLLRIEASVEEAE

XP_023554105.1 uncharacterized protein LOC111811473 [Cucurbita pepo subsp. pepo]1.6e-5292.74Show/hide
Query:  ATASATLSPAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN
        ATASATLSP +STAAPIAAGSRRQR  NVHYITGLNSFGGLKAHN + SLGLPVCADQSFA IVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN
Subjt:  ATASATLSPAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN

Query:  GLVLIGVAVGFVLLRIEASVEEAE
        GLVL+GVAVGFVLLRIEASVEEAE
Subjt:  GLVLIGVAVGFVLLRIEASVEEAE

XP_038887487.1 uncharacterized protein LOC120077620 [Benincasa hispida]3.5e-5596.8Show/hide
Query:  MATASATLSPAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
        MATASATLSPAM TAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHN VVSLGLPVCADQSFA I+SSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
Subjt:  MATASATLSPAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII

Query:  NGLVLIGVAVGFVLLRIEASVEEAE
        NGLVLIGVAVGFVLLRIEASVEEAE
Subjt:  NGLVLIGVAVGFVLLRIEASVEEAE

TrEMBL top hitse value%identityAlignment
A0A0A0K4W4 Uncharacterized protein5.5e-7079.02Show/hide
Query:  MNHPNSSYLIHFPPSSFSLQSLLFPHP----ILNLIIFNFFFHSGSIPSLFSLKIHFSHLGFH-SILTLPSLPLLSGIIPMATASATLSPAMSTAAPIAA
        MNHPNSSYLIH    SFS+Q+L  P P    I +LI FNF FHSGSIPSLF  +       F  +I +  SLPLLSG IPMATASATLS AMS+AAPI+A
Subjt:  MNHPNSSYLIHFPPSSFSLQSLLFPHP----ILNLIIFNFFFHSGSIPSLFSLKIHFSHLGFH-SILTLPSLPLLSGIIPMATASATLSPAMSTAAPIAA

Query:  GSRRQRQTNVHYITGLNSFGGLKAHNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS
        GSRRQRQTN H+I+GLNSF GLKAHN VVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS
Subjt:  GSRRQRQTNVHYITGLNSFGGLKAHNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEAS

Query:  VEEAE
        VEEAE
Subjt:  VEEAE

A0A1S3C0U4 uncharacterized protein LOC1034952014.5e-5698.4Show/hide
Query:  MATASATLSPAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
        MATASATLS AMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHN VVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
Subjt:  MATASATLSPAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII

Query:  NGLVLIGVAVGFVLLRIEASVEEAE
        NGLVLIGVAVGFVLLRIEASVEEAE
Subjt:  NGLVLIGVAVGFVLLRIEASVEEAE

A0A6J1C3G5 uncharacterized protein LOC1110080076.3e-5090.62Show/hide
Query:  MATASATLSPAMSTAAPIAAGSRR-QRQTNVHYITGLNSFGGLKAHNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKN--GGGALSSTCNAAGEIFRIA
        MATASATLSPAMSTAAPIAAGSRR QR  NVHYITGLNSFGGLKAHN VVSLGLP+C D SFAKIVSSLKYPSKGKGKN  GGGALSSTCNAAGEIFRIA
Subjt:  MATASATLSPAMSTAAPIAAGSRR-QRQTNVHYITGLNSFGGLKAHNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKN--GGGALSSTCNAAGEIFRIA

Query:  AIINGLVLIGVAVGFVLLRIEASVEEAE
        AIINGLVL+GVAVGFVLLRIEA VEE E
Subjt:  AIINGLVLIGVAVGFVLLRIEASVEEAE

A0A6J1GND2 uncharacterized protein LOC1114555033.0e-5291.94Show/hide
Query:  ATASATLSPAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN
        AT SATLSP +STAAPIAAGSRRQR TNVHYITGLNSF GLKAHN + SLGLPVCADQSFA IVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN
Subjt:  ATASATLSPAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN

Query:  GLVLIGVAVGFVLLRIEASVEEAE
        GLVL+GVAVGFVLLRIEASVEEAE
Subjt:  GLVLIGVAVGFVLLRIEASVEEAE

A0A6J1I5T0 uncharacterized protein LOC1114709415.5e-5494.35Show/hide
Query:  ATASATLSPAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN
        ATASATLSPA+STAAPIAAGSRRQR TNVHYITGLNSFGGLKAHN + SLGLPVCADQSFA IVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN
Subjt:  ATASATLSPAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKAHNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIIN

Query:  GLVLIGVAVGFVLLRIEASVEEAE
        GLVL+GVAVGFVLLRIEASVEEAE
Subjt:  GLVLIGVAVGFVLLRIEASVEEAE

SwissProt top hitse value%identityAlignment
P80883 Cytochrome b6-f complex subunit 7 (Fragment)1.7e-0780.56Show/hide
Query:  NAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASVEE
        NAA EIFRIAA++NGL L+GVA+GFVLLRIEA+VEE
Subjt:  NAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASVEE

Arabidopsis top hitse value%identityAlignment
AT2G26500.1 cytochrome b6f complex subunit (petM), putative8.7e-2857.94Show/hide
Query:  ATASATLSPAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKA-HNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNG-GGALSSTCNAAGEIFRIAAI
        A A A +S   S     +  ++++ +  V YITGLNS+GGLKA +NKVVS+G P+C +Q FA +V SL      KG+ G GGALS+TCNA GEIF+IAAI
Subjt:  ATASATLSPAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKA-HNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNG-GGALSSTCNAAGEIFRIAAI

Query:  INGLVLIGVAVGFVLLRIEASVEEAE
        +N L L+GVAVGFVLLRIE SVEEAE
Subjt:  INGLVLIGVAVGFVLLRIEASVEEAE

AT2G26500.2 cytochrome b6f complex subunit (petM), putative8.7e-2857.94Show/hide
Query:  ATASATLSPAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKA-HNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNG-GGALSSTCNAAGEIFRIAAI
        A A A +S   S     +  ++++ +  V YITGLNS+GGLKA +NKVVS+G P+C +Q FA +V SL      KG+ G GGALS+TCNA GEIF+IAAI
Subjt:  ATASATLSPAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKA-HNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNG-GGALSSTCNAAGEIFRIAAI

Query:  INGLVLIGVAVGFVLLRIEASVEEAE
        +N L L+GVAVGFVLLRIE SVEEAE
Subjt:  INGLVLIGVAVGFVLLRIEASVEEAE

AT2G26500.3 cytochrome b6f complex subunit (petM), putative3.3e-1139.2Show/hide
Query:  ATASATLSPAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKA-HNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII
        A A A +S   S     +  ++++ +  V YITGLNS+GGLKA +NKVVS+G P+C +Q FA +V SLK                               
Subjt:  ATASATLSPAMSTAAPIAAGSRRQRQTNVHYITGLNSFGGLKA-HNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAII

Query:  NGLVLIGVAVGFVLLRIEASVEEAE
              G  VGFVLLRIE SVEEAE
Subjt:  NGLVLIGVAVGFVLLRIEASVEEAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCACCCAAATTCCTCTTACCTTATCCATTTCCCCCCTTCATCTTTCTCCTTACAAAGCCTCCTTTTTCCCCATCCAATCCTCAATCTCATCATCTTCAATTTTTT
CTTCCACTCAGGTTCAATCCCTTCCCTTTTTTCCCTCAAAATACATTTTTCCCATCTGGGTTTTCACTCAATATTGACTCTTCCTTCTCTTCCTCTTCTTTCAGGCATCA
TTCCAATGGCTACAGCCTCCGCTACCCTCTCGCCGGCCATGTCCACCGCCGCCCCCATCGCCGCCGGCTCAAGGCGGCAGAGGCAAACCAATGTCCACTACATTACTGGG
CTTAACTCCTTTGGTGGTTTGAAAGCTCACAACAAAGTCGTCTCCTTAGGCCTTCCCGTTTGTGCCGATCAATCATTTGCAAAAATTGTGAGCTCTTTGAAATACCCATC
AAAGGGAAAGGGGAAAAACGGCGGTGGAGCTCTTTCTTCCACTTGTAATGCCGCCGGTGAGATTTTCAGGATTGCTGCCATTATCAATGGGCTGGTTCTTATTGGAGTGG
CTGTGGGGTTTGTTCTTCTTCGGATTGAAGCATCTGTGGAGGAGGCAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATTGCAAGTACAACAACAGTAATGACAATATCACCATTTTTTATTTTCATGGCTAGTATTCAAAGATTTGAGAAATCTTTGGCAATTCTAATCTGTTTATGAACCACCCA
AATTCCTCTTACCTTATCCATTTCCCCCCTTCATCTTTCTCCTTACAAAGCCTCCTTTTTCCCCATCCAATCCTCAATCTCATCATCTTCAATTTTTTCTTCCACTCAGG
TTCAATCCCTTCCCTTTTTTCCCTCAAAATACATTTTTCCCATCTGGGTTTTCACTCAATATTGACTCTTCCTTCTCTTCCTCTTCTTTCAGGCATCATTCCAATGGCTA
CAGCCTCCGCTACCCTCTCGCCGGCCATGTCCACCGCCGCCCCCATCGCCGCCGGCTCAAGGCGGCAGAGGCAAACCAATGTCCACTACATTACTGGGCTTAACTCCTTT
GGTGGTTTGAAAGCTCACAACAAAGTCGTCTCCTTAGGCCTTCCCGTTTGTGCCGATCAATCATTTGCAAAAATTGTGAGCTCTTTGAAATACCCATCAAAGGGAAAGGG
GAAAAACGGCGGTGGAGCTCTTTCTTCCACTTGTAATGCCGCCGGTGAGATTTTCAGGATTGCTGCCATTATCAATGGGCTGGTTCTTATTGGAGTGGCTGTGGGGTTTG
TTCTTCTTCGGATTGAAGCATCTGTGGAGGAGGCAGAGTGAAAAGCTACCAAAAATGGTTGATGATGATGAGGATATTGGTCAGTTATCTGAAATTTCTATATCAATGCA
TATCGGTTTTTATGGGACTACTCAAAGCTGCTCGTAGTCTGTTAACTGGATCTTCGAGGTGCAATTTTCAGATTTAGTACATTTAATGCTTATAATTCCAGTGAATATAA
GAATTCCTGCTAGTATCCAACTGAATTGCAGGTTGGCGAGTGCCCGTGCCCTCATATCAGCTTCCTCGGAGGCACAAATGACTGCTCCGAGCATTTCGTCTTTGCCGTTG
TCCATGATCCTCATGCTGCAGCCCTTAGGAACTAAGTTGGGAACCCATAGCATGAACCCCATGTTCATAAACCAACACCCTTGCAAAACAACTAATAATGAAAGAATGAG
AGCTGCAGGGAAGTTGGTAGGACAACAAGCAGCTACGAGTACTGACACAAGAGATACAAACACTATCACTTGCAAGAGCCAATGGTAATGACCTTCGATGCCATTATGGT
CAGCTGAGTGGAAATGGAGCAAGAATAACTCTTGACTGAAAACACAAGCTGCAAAGACGCCATCGATACCAAATGATACATTTGACGAGCGACTCAACTCGTTATAGAGG
GTAAAACCTGAAAATATGGCAAGGTGTAGGAACATGGTAGCGTGCTCCAAGTTGACGACTTTGATAGACAAATGAACAAAAGGGTAGTCCAAAAATTGTCTAAAAATTGC
AATGATCGAAAAAGAGAACACGAAAATGAGCTCCAAGTACTTGAATTTGGAAAAAGGTCGATCGAGAGGGTACCAAAATCGTACTTTGAAATTTGAAGAGCCTCTGAGAT
TGTAGGTTTTGATTGTATTCACAGTATGCCAAAGGCCAAGAAGAGTGAATACAAAACCGGATGCTACATGAGGTACTAATTGCCCCATTGAAACCTCTACTTTCAAACTC
TAGCTTACCAAATTCATCCATAAGCCAATGCCATTTTATATCCTCTCTTTTGGTTTGTAGTTGCAACCTAAAAATGCTTATGGTTGTCTAGTCAATTATTTTGTGCATAA
TGTATGTGTTTCCACTAGAAAAGTTGTCAAAAGTTGATAAAAGAAGCTTTAGAAA
Protein sequenceShow/hide protein sequence
MNHPNSSYLIHFPPSSFSLQSLLFPHPILNLIIFNFFFHSGSIPSLFSLKIHFSHLGFHSILTLPSLPLLSGIIPMATASATLSPAMSTAAPIAAGSRRQRQTNVHYITG
LNSFGGLKAHNKVVSLGLPVCADQSFAKIVSSLKYPSKGKGKNGGGALSSTCNAAGEIFRIAAIINGLVLIGVAVGFVLLRIEASVEEAE