CuGenDBv2

Gene ID	PI0016576
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Beta-galactosidase
Genome location	chr06:23254638..23255174
RNA-Seq Expression	PI0016576
Synteny	PI0016576
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0025363.1 Beta-galactosidase [Cucumis melo var. makuwa]

2.2e-77

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Query:  MEPQIGKPFLYAATAKDLWDMTQKLYSKRQNAFRWYTLRKQVHECKQGTLDVTSYFNKLSLLWQEMNLCRETVWDTPNDGLQFARLEKVNRVYDFLASLH
        MEPQIGKP LYAATAKDLWD TQ LYSKRQNA R YTLRKQVH CKQGTLDVT+YFNKLSLLWQEM+LCRETVWDTPND  Q+A+LE+ +RVYDFLA L+
Subjt:  MEPQIGKPFLYAATAKDLWDMTQKLYSKRQNAFRWYTLRKQVHECKQGTLDVTSYFNKLSLLWQEMNLCRETVWDTPNDGLQFARLEKVNRVYDFLASLH

Query:  PKFDIVCGRILGQSPLSSLMEVCYEVHLEEDRMNAMSVLTTP--DSAAFSARSSNLDNEKSNSKPVSTCENCKKQWHTKD
        PKFD VCGRILGQ PL SLMEVC+EV LEEDR NAM VLTTP  DSAAFSARSSN D++K+N K +  CE+CKKQWHTKD
Subjt:  PKFDIVCGRILGQSPLSSLMEVCYEVHLEEDRMNAMSVLTTP--DSAAFSARSSNLDNEKSNSKPVSTCENCKKQWHTKD

KAA0031941.1 Beta-galactosidase [Cucumis melo var. makuwa]

2.2e-77

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Query:  MEPQIGKPFLYAATAKDLWDMTQKLYSKRQNAFRWYTLRKQVHECKQGTLDVTSYFNKLSLLWQEMNLCRETVWDTPNDGLQFARLEKVNRVYDFLASLH
        MEPQIGKP LYAATAKDLWD TQ LYSKRQNA R YTLRKQVH CKQGTLDVT+YFNKLSLLWQEM+LCRETVWDTPND  Q+A+LE+ +RVYDFLA L+
Subjt:  MEPQIGKPFLYAATAKDLWDMTQKLYSKRQNAFRWYTLRKQVHECKQGTLDVTSYFNKLSLLWQEMNLCRETVWDTPNDGLQFARLEKVNRVYDFLASLH

Query:  PKFDIVCGRILGQSPLSSLMEVCYEVHLEEDRMNAMSVLTTP--DSAAFSARSSNLDNEKSNSKPVSTCENCKKQWHTKD
        PKFD VCGRILGQ PL SLMEVC+EV LEEDR NAM VLTTP  DSAAFSARSSN D++K+N K +  CE+CKKQWHTKD
Subjt:  PKFDIVCGRILGQSPLSSLMEVCYEVHLEEDRMNAMSVLTTP--DSAAFSARSSNLDNEKSNSKPVSTCENCKKQWHTKD

KAA0048203.1 Beta-galactosidase [Cucumis melo var. makuwa]

2.2e-77

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Query:  MEPQIGKPFLYAATAKDLWDMTQKLYSKRQNAFRWYTLRKQVHECKQGTLDVTSYFNKLSLLWQEMNLCRETVWDTPNDGLQFARLEKVNRVYDFLASLH
        MEPQIGKP LYAATAKDLWD TQ LYSKRQNA R YTLRKQVH CKQGTLDVT+YFNKLSLLWQEM+LCRETVWDTPND  Q+A+LE+ +RVYDFLA L+
Subjt:  MEPQIGKPFLYAATAKDLWDMTQKLYSKRQNAFRWYTLRKQVHECKQGTLDVTSYFNKLSLLWQEMNLCRETVWDTPNDGLQFARLEKVNRVYDFLASLH

Query:  PKFDIVCGRILGQSPLSSLMEVCYEVHLEEDRMNAMSVLTTP--DSAAFSARSSNLDNEKSNSKPVSTCENCKKQWHTKD
        PKFD VCGRILGQ PL SLMEVC+EV LEEDR NAM VLTTP  DSAAFSARSSN D++K+N K +  CE+CKKQWHTKD
Subjt:  PKFDIVCGRILGQSPLSSLMEVCYEVHLEEDRMNAMSVLTTP--DSAAFSARSSNLDNEKSNSKPVSTCENCKKQWHTKD

KAA0052172.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]

5.9e-78

80.56

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Query:  MEPQIGKPFLYAATAKDLWDMTQKLYSKRQNAFRWYTLRKQVHECKQGTLDVTSYFNKLSLLWQEMNLCRETVWDTPNDGLQFARLEKVNRVYDFLASLH
        MEPQIGKP LYAATAKDLWD TQ LYSKRQNA R YTLRKQVH CKQGTLDVT+YFNKLSLLWQEM+LCRETVWDTPND  Q+A+LE+ +RVYDFLA L+
Subjt:  MEPQIGKPFLYAATAKDLWDMTQKLYSKRQNAFRWYTLRKQVHECKQGTLDVTSYFNKLSLLWQEMNLCRETVWDTPNDGLQFARLEKVNRVYDFLASLH

Query:  PKFDIVCGRILGQSPLSSLMEVCYEVHLEEDRMNAMSVLTTP--DSAAFSARSSNLDNEKSNSKPVSTCENCKKQWHTKD
        PKFD VCGRILGQ PL SLMEVC+EV LEEDR NAM VLTTP  DSAAFSARSSN D++K+N K +S CE+CKKQWHTKD
Subjt:  PKFDIVCGRILGQSPLSSLMEVCYEVHLEEDRMNAMSVLTTP--DSAAFSARSSNLDNEKSNSKPVSTCENCKKQWHTKD

KAA0067540.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.7e-77

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Query:  MEPQIGKPFLYAATAKDLWDMTQKLYSKRQNAFRWYTLRKQVHECKQGTLDVTSYFNKLSLLWQEMNLCRETVWDTPNDGLQFARLEKVNRVYDFLASLH
        MEPQIGKP LYAATAKDLWD TQ LYSKRQNA R YTLRKQVH CKQGTLDVT+YFNKLSLLWQEM+LCRETVWDTPND  Q+A+LE+ NRVYDFLA L+
Subjt:  MEPQIGKPFLYAATAKDLWDMTQKLYSKRQNAFRWYTLRKQVHECKQGTLDVTSYFNKLSLLWQEMNLCRETVWDTPNDGLQFARLEKVNRVYDFLASLH

Query:  PKFDIVCGRILGQSPLSSLMEVCYEVHLEEDRMNAMSVLTTP--DSAAFSARSSNLDNEKSNSKPVSTCENCKKQWHTKD
        PKFD VCGRILGQ PL SLMEVC+EV LEEDR NAM VLTTP  DSAAFSA+SSN D++K+N K +  CE+CKKQWHTKD
Subjt:  PKFDIVCGRILGQSPLSSLMEVCYEVHLEEDRMNAMSVLTTP--DSAAFSARSSNLDNEKSNSKPVSTCENCKKQWHTKD

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SQW1 Beta-galactosidase

1.1e-77

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Query:  MEPQIGKPFLYAATAKDLWDMTQKLYSKRQNAFRWYTLRKQVHECKQGTLDVTSYFNKLSLLWQEMNLCRETVWDTPNDGLQFARLEKVNRVYDFLASLH
        MEPQIGKP LYAATAKDLWD TQ LYSKRQNA R YTLRKQVH CKQGTLDVT+YFNKLSLLWQEM+LCRETVWDTPND  Q+A+LE+ +RVYDFLA L+
Subjt:  MEPQIGKPFLYAATAKDLWDMTQKLYSKRQNAFRWYTLRKQVHECKQGTLDVTSYFNKLSLLWQEMNLCRETVWDTPNDGLQFARLEKVNRVYDFLASLH

Query:  PKFDIVCGRILGQSPLSSLMEVCYEVHLEEDRMNAMSVLTTP--DSAAFSARSSNLDNEKSNSKPVSTCENCKKQWHTKD
        PKFD VCGRILGQ PL SLMEVC+EV LEEDR NAM VLTTP  DSAAFSARSSN D++K+N K +  CE+CKKQWHTKD
Subjt:  PKFDIVCGRILGQSPLSSLMEVCYEVHLEEDRMNAMSVLTTP--DSAAFSARSSNLDNEKSNSKPVSTCENCKKQWHTKD

A0A5A7TVI6 Beta-galactosidase

1.1e-77

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Query:  MEPQIGKPFLYAATAKDLWDMTQKLYSKRQNAFRWYTLRKQVHECKQGTLDVTSYFNKLSLLWQEMNLCRETVWDTPNDGLQFARLEKVNRVYDFLASLH
        MEPQIGKP LYAATAKDLWD TQ LYSKRQNA R YTLRKQVH CKQGTLDVT+YFNKLSLLWQEM+LCRETVWDTPND  Q+A+LE+ +RVYDFLA L+
Subjt:  MEPQIGKPFLYAATAKDLWDMTQKLYSKRQNAFRWYTLRKQVHECKQGTLDVTSYFNKLSLLWQEMNLCRETVWDTPNDGLQFARLEKVNRVYDFLASLH

Query:  PKFDIVCGRILGQSPLSSLMEVCYEVHLEEDRMNAMSVLTTP--DSAAFSARSSNLDNEKSNSKPVSTCENCKKQWHTKD
        PKFD VCGRILGQ PL SLMEVC+EV LEEDR NAM VLTTP  DSAAFSARSSN D++K+N K +  CE+CKKQWHTKD
Subjt:  PKFDIVCGRILGQSPLSSLMEVCYEVHLEEDRMNAMSVLTTP--DSAAFSARSSNLDNEKSNSKPVSTCENCKKQWHTKD

A0A5A7U8U2 Retrovirus-related Pol polyprotein from transposon TNT 1-94

2.8e-78

80.56

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Query:  MEPQIGKPFLYAATAKDLWDMTQKLYSKRQNAFRWYTLRKQVHECKQGTLDVTSYFNKLSLLWQEMNLCRETVWDTPNDGLQFARLEKVNRVYDFLASLH
        MEPQIGKP LYAATAKDLWD TQ LYSKRQNA R YTLRKQVH CKQGTLDVT+YFNKLSLLWQEM+LCRETVWDTPND  Q+A+LE+ +RVYDFLA L+
Subjt:  MEPQIGKPFLYAATAKDLWDMTQKLYSKRQNAFRWYTLRKQVHECKQGTLDVTSYFNKLSLLWQEMNLCRETVWDTPNDGLQFARLEKVNRVYDFLASLH

Query:  PKFDIVCGRILGQSPLSSLMEVCYEVHLEEDRMNAMSVLTTP--DSAAFSARSSNLDNEKSNSKPVSTCENCKKQWHTKD
        PKFD VCGRILGQ PL SLMEVC+EV LEEDR NAM VLTTP  DSAAFSARSSN D++K+N K +S CE+CKKQWHTKD
Subjt:  PKFDIVCGRILGQSPLSSLMEVCYEVHLEEDRMNAMSVLTTP--DSAAFSARSSNLDNEKSNSKPVSTCENCKKQWHTKD

A0A5A7VK49 Beta-galactosidase

8.3e-78

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Query:  MEPQIGKPFLYAATAKDLWDMTQKLYSKRQNAFRWYTLRKQVHECKQGTLDVTSYFNKLSLLWQEMNLCRETVWDTPNDGLQFARLEKVNRVYDFLASLH
        MEPQIGKP LYAATAKDLWD TQ LYSKRQNA R YTLRKQVH CKQGTLDVT+YFNKLSLLWQEM+LCRETVWDTPND  Q+A+LE+ NRVYDFLA L+
Subjt:  MEPQIGKPFLYAATAKDLWDMTQKLYSKRQNAFRWYTLRKQVHECKQGTLDVTSYFNKLSLLWQEMNLCRETVWDTPNDGLQFARLEKVNRVYDFLASLH

Query:  PKFDIVCGRILGQSPLSSLMEVCYEVHLEEDRMNAMSVLTTP--DSAAFSARSSNLDNEKSNSKPVSTCENCKKQWHTKD
        PKFD VCGRILGQ PL SLMEVC+EV LEEDR NAM VLTTP  DSAAFSA+SSN D++K+N K +  CE+CKKQWHTKD
Subjt:  PKFDIVCGRILGQSPLSSLMEVCYEVHLEEDRMNAMSVLTTP--DSAAFSARSSNLDNEKSNSKPVSTCENCKKQWHTKD

A0A5A7VLQ7 Beta-galactosidase

1.1e-77

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Query:  MEPQIGKPFLYAATAKDLWDMTQKLYSKRQNAFRWYTLRKQVHECKQGTLDVTSYFNKLSLLWQEMNLCRETVWDTPNDGLQFARLEKVNRVYDFLASLH
        MEPQIGKP LYAATAKDLWD TQ LYSKRQNA R YTLRKQVH CKQGTLDVT+YFNKLSLLWQEM+LCRETVWDTPND  Q+A+LE+ +RVYDFLA L+
Subjt:  MEPQIGKPFLYAATAKDLWDMTQKLYSKRQNAFRWYTLRKQVHECKQGTLDVTSYFNKLSLLWQEMNLCRETVWDTPNDGLQFARLEKVNRVYDFLASLH

Query:  PKFDIVCGRILGQSPLSSLMEVCYEVHLEEDRMNAMSVLTTP--DSAAFSARSSNLDNEKSNSKPVSTCENCKKQWHTKD
        PKFD VCGRILGQ PL SLMEVC+EV LEEDR NAM VLTTP  DSAAFSARSSN D++K+N K +  CE+CKKQWHTKD
Subjt:  PKFDIVCGRILGQSPLSSLMEVCYEVHLEEDRMNAMSVLTTP--DSAAFSARSSNLDNEKSNSKPVSTCENCKKQWHTKD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGAGCCACAAATAGGCAAACCCTTTCTGTATGCAGCTACTGCAAAGGATCTCTGGGACATGACTCAAAAACTCTACTCAAAGCGTCAGAATGCTTTCCGTTGGTATAC
CCTGAGAAAACAAGTCCATGAGTGCAAGCAAGGAACACTCGATGTAACTTCATATTTCAACAAACTTTCCTTGCTGTGGCAAGAGATGAATTTGTGTAGAGAGACTGTTT
GGGATACTCCAAATGACGGTTTACAGTTTGCTAGGCTGGAAAAAGTTAATCGGGTTTATGATTTTCTTGCTAGTCTCCATCCTAAGTTTGATATTGTTTGTGGTCGTATT
CTTGGCCAGAGCCCTCTCTCTTCCCTAATGGAAGTTTGCTATGAAGTTCATCTTGAAGAAGATCGCATGAATGCCATGAGTGTTCTGACTACCCCTGACTCTGCTGCCTT
TAGTGCTCGTTCCTCCAATCTCGATAATGAGAAAAGCAACAGCAAACCGGTTTCCACCTGTGAGAATTGTAAGAAACAGTGGCACACTAAGGACTAG

mRNA sequence

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Protein sequence

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MEPQIGKPFLYAATAKDLWDMTQKLYSKRQNAFRWYTLRKQVHECKQGTLDVTSYFNKLSLLWQEMNLCRETVWDTPNDGLQFARLEKVNRVYDFLASLHPKFDIVCGRI
LGQSPLSSLMEVCYEVHLEEDRMNAMSVLTTPDSAAFSARSSNLDNEKSNSKPVSTCENCKKQWHTKD

PI0016576 (gene) of Melon (PI 482460) v1 genome