CuGenDBv2

Gene ID	PI0016586
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	DUF4283 domain-containing protein
Genome location	chr03:13151885..13152890
RNA-Seq Expression	PI0016586
Synteny	PI0016586
Gene Ontology terms	GO:0000166 - nucleotide binding (molecular function) GO:0003824 - catalytic activity (molecular function)
InterPro domains	IPR025558 - Domain of unknown function DUF4283

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0062320.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]

2.9e-45

57.32

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Query:  MPTVMILKNVLICFQFKRPKSVEWILSRGPWHLGGKSMLPGKWVPGIVPKTFVFNSIPVWIKLGRIPMDLWTESDIAITASVIGKLLSLDLATKERRRLS
        MP + IL+N LICFQF+R KSVEWILSRGPWHLGGK ML  KW PGIVP++FVFNS+PVWI LG++PM+LWTE+ +A+ A  +GK +SLDLATKERRRLS
Subjt:  MPTVMILKNVLICFQFKRPKSVEWILSRGPWHLGGKSMLPGKWVPGIVPKTFVFNSIPVWIKLGRIPMDLWTESDIAITASVIGKLLSLDLATKERRRLS

Query:  FARMCVELEGLLMSGNPVLV---------------------VCHSFGHSAGKCPRKEESQVQQE
        +AR+CVELEG     + + V                     +C +FGHS+ KC R EES+  QE
Subjt:  FARMCVELEGLLMSGNPVLV---------------------VCHSFGHSAGKCPRKEESQVQQE

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]

5.0e-45

56.21

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Query:  MPTVMILKNVLICFQFKRPKSVEWILSRGPWHLGGKSMLPGKWVPGIVPKTFVFNSIPVWIKLGRIPMDLWTESDIAITASVIGKLLSLDLATKERRRLS
        MPT+ IL+N LICFQF+RP SVEWILSRGPWHLGGK ML  KW  GIVP++FVFNS+PVWI+LGRIPM+LWTE+ +AI ASV+GK ++LDLATKE  RLS
Subjt:  MPTVMILKNVLICFQFKRPKSVEWILSRGPWHLGGKSMLPGKWVPGIVPKTFVFNSIPVWIKLGRIPMDLWTESDIAITASVIGKLLSLDLATKERRRLS

Query:  FARMCVELEGLLMSGNPVLV---------------------VCHSFGHSAGKCPRKEESQVQQEAALPR
        +AR+CV+LEG       + V                     +C + GHS GKCPR  ES++ QE  + +
Subjt:  FARMCVELEGLLMSGNPVLV---------------------VCHSFGHSAGKCPRKEESQVQQEAALPR

TYK18951.1 uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa]

4.0e-42

55.49

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Query:  MPTVMILKNVLICFQFKRPKSVEWILSRGPWHLGGKSMLPGKWVPGIVPKTFVFNSIPVWIKLGRIPMDLWTESDIAITASVIGKLLSLDLATKERRRLS
        MP + IL+N LICFQF+R KSVEWILSRGPWHL  KSML  KW PGIVP+ FVFNS+PVWI+LG++PM+LWTE+ +A+ AS +GK +SLDLATKERRRLS
Subjt:  MPTVMILKNVLICFQFKRPKSVEWILSRGPWHLGGKSMLPGKWVPGIVPKTFVFNSIPVWIKLGRIPMDLWTESDIAITASVIGKLLSLDLATKERRRLS

Query:  FARMCVELEGLLMSGNPVLV---------------------VCHSFGHSAGKCPRKEESQVQQE
        +AR+CVELE        + V                     +C +FGHS   C R  ES+  QE
Subjt:  FARMCVELEGLLMSGNPVLV---------------------VCHSFGHSAGKCPRKEESQVQQE

TYK26656.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]

1.5e-44

56.71

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Query:  MPTVMILKNVLICFQFKRPKSVEWILSRGPWHLGGKSMLPGKWVPGIVPKTFVFNSIPVWIKLGRIPMDLWTESDIAITASVIGKLLSLDLATKERRRLS
        MP + IL+N LICFQF+R KSVEWILSRGPWHLGGK ML  KW P IVP++FVFNS+PVWI LG++PM+LWTE+ +A+ A  +GK +SLDLATKERRRLS
Subjt:  MPTVMILKNVLICFQFKRPKSVEWILSRGPWHLGGKSMLPGKWVPGIVPKTFVFNSIPVWIKLGRIPMDLWTESDIAITASVIGKLLSLDLATKERRRLS

Query:  FARMCVELEGLLMSGNPVLV---------------------VCHSFGHSAGKCPRKEESQVQQE
        +AR+CVELEG     + + V                     +C +FGHS+ KC R EES+  QE
Subjt:  FARMCVELEGLLMSGNPVLV---------------------VCHSFGHSAGKCPRKEESQVQQE

XP_008460524.1 PREDICTED: uncharacterized protein LOC103499323 [Cucumis melo]

2.9e-45

57.32

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Query:  MPTVMILKNVLICFQFKRPKSVEWILSRGPWHLGGKSMLPGKWVPGIVPKTFVFNSIPVWIKLGRIPMDLWTESDIAITASVIGKLLSLDLATKERRRLS
        MP + IL+N LICFQF+R KSVEWILSRGPWHLGGK ML  KW PGIVP++FVFNS+PVWI LG++PM+LWTE+ +A+ A  +GK +SLDLATKERRRLS
Subjt:  MPTVMILKNVLICFQFKRPKSVEWILSRGPWHLGGKSMLPGKWVPGIVPKTFVFNSIPVWIKLGRIPMDLWTESDIAITASVIGKLLSLDLATKERRRLS

Query:  FARMCVELEGLLMSGNPVLV---------------------VCHSFGHSAGKCPRKEESQVQQE
        +AR+CVELEG     + + V                     +C +FGHS+ KC R EES+  QE
Subjt:  FARMCVELEGLLMSGNPVLV---------------------VCHSFGHSAGKCPRKEESQVQQE

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CC83 uncharacterized protein LOC103499323

1.4e-45

57.32

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Query:  MPTVMILKNVLICFQFKRPKSVEWILSRGPWHLGGKSMLPGKWVPGIVPKTFVFNSIPVWIKLGRIPMDLWTESDIAITASVIGKLLSLDLATKERRRLS
        MP + IL+N LICFQF+R KSVEWILSRGPWHLGGK ML  KW PGIVP++FVFNS+PVWI LG++PM+LWTE+ +A+ A  +GK +SLDLATKERRRLS
Subjt:  MPTVMILKNVLICFQFKRPKSVEWILSRGPWHLGGKSMLPGKWVPGIVPKTFVFNSIPVWIKLGRIPMDLWTESDIAITASVIGKLLSLDLATKERRRLS

Query:  FARMCVELEGLLMSGNPVLV---------------------VCHSFGHSAGKCPRKEESQVQQE
        +AR+CVELEG     + + V                     +C +FGHS+ KC R EES+  QE
Subjt:  FARMCVELEGLLMSGNPVLV---------------------VCHSFGHSAGKCPRKEESQVQQE

A0A5A7TWG5 Reverse transcriptase domain-containing protein

1.9e-42

55.49

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Query:  MPTVMILKNVLICFQFKRPKSVEWILSRGPWHLGGKSMLPGKWVPGIVPKTFVFNSIPVWIKLGRIPMDLWTESDIAITASVIGKLLSLDLATKERRRLS
        MP + IL+N LICFQF+R KSVEWILSRGPWHL  KSML  KW PGIVP+ FVFNS+PVWI+LG++PM+LWTE+ +A+ AS +GK +SLDLATKERRRLS
Subjt:  MPTVMILKNVLICFQFKRPKSVEWILSRGPWHLGGKSMLPGKWVPGIVPKTFVFNSIPVWIKLGRIPMDLWTESDIAITASVIGKLLSLDLATKERRRLS

Query:  FARMCVELEGLLMSGNPVLV---------------------VCHSFGHSAGKCPRKEESQVQQE
        +AR+CVELE        + V                     +C +FGHS   C R  ES+  QE
Subjt:  FARMCVELEGLLMSGNPVLV---------------------VCHSFGHSAGKCPRKEESQVQQE

A0A5A7V507 DUF4283 domain-containing protein

1.4e-45

57.32

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Query:  MPTVMILKNVLICFQFKRPKSVEWILSRGPWHLGGKSMLPGKWVPGIVPKTFVFNSIPVWIKLGRIPMDLWTESDIAITASVIGKLLSLDLATKERRRLS
        MP + IL+N LICFQF+R KSVEWILSRGPWHLGGK ML  KW PGIVP++FVFNS+PVWI LG++PM+LWTE+ +A+ A  +GK +SLDLATKERRRLS
Subjt:  MPTVMILKNVLICFQFKRPKSVEWILSRGPWHLGGKSMLPGKWVPGIVPKTFVFNSIPVWIKLGRIPMDLWTESDIAITASVIGKLLSLDLATKERRRLS

Query:  FARMCVELEGLLMSGNPVLV---------------------VCHSFGHSAGKCPRKEESQVQQE
        +AR+CVELEG     + + V                     +C +FGHS+ KC R EES+  QE
Subjt:  FARMCVELEGLLMSGNPVLV---------------------VCHSFGHSAGKCPRKEESQVQQE

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein

2.4e-45

56.21

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Query:  MPTVMILKNVLICFQFKRPKSVEWILSRGPWHLGGKSMLPGKWVPGIVPKTFVFNSIPVWIKLGRIPMDLWTESDIAITASVIGKLLSLDLATKERRRLS
        MPT+ IL+N LICFQF+RP SVEWILSRGPWHLGGK ML  KW  GIVP++FVFNS+PVWI+LGRIPM+LWTE+ +AI ASV+GK ++LDLATKE  RLS
Subjt:  MPTVMILKNVLICFQFKRPKSVEWILSRGPWHLGGKSMLPGKWVPGIVPKTFVFNSIPVWIKLGRIPMDLWTESDIAITASVIGKLLSLDLATKERRRLS

Query:  FARMCVELEGLLMSGNPVLV---------------------VCHSFGHSAGKCPRKEESQVQQEAALPR
        +AR+CV+LEG       + V                     +C + GHS GKCPR  ES++ QE  + +
Subjt:  FARMCVELEGLLMSGNPVLV---------------------VCHSFGHSAGKCPRKEESQVQQEAALPR

A0A5D3DSG9 DUF4283 domain-containing protein

7.1e-45

56.71

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Query:  MPTVMILKNVLICFQFKRPKSVEWILSRGPWHLGGKSMLPGKWVPGIVPKTFVFNSIPVWIKLGRIPMDLWTESDIAITASVIGKLLSLDLATKERRRLS
        MP + IL+N LICFQF+R KSVEWILSRGPWHLGGK ML  KW P IVP++FVFNS+PVWI LG++PM+LWTE+ +A+ A  +GK +SLDLATKERRRLS
Subjt:  MPTVMILKNVLICFQFKRPKSVEWILSRGPWHLGGKSMLPGKWVPGIVPKTFVFNSIPVWIKLGRIPMDLWTESDIAITASVIGKLLSLDLATKERRRLS

Query:  FARMCVELEGLLMSGNPVLV---------------------VCHSFGHSAGKCPRKEESQVQQE
        +AR+CVELEG     + + V                     +C +FGHS+ KC R EES+  QE
Subjt:  FARMCVELEGLLMSGNPVLV---------------------VCHSFGHSAGKCPRKEESQVQQE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G01050.1 zinc ion binding;nucleic acid binding

6.8e-08

26.06

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Query:  TVMILKNVLICFQFKRPKSVEWILSRGPWHLGGKSMLPGKWVPGIVPKTFVFNSIPVWIKLGRIPMDLWTESDIAITASVIGKLLSLDLATKERRRLSFA
        TVM L       +F+  +     L+ GPW + G  +L   W     P      + PVW++L  IP + +    +   A  +G+ L +D+ T    +  FA
Subjt:  TVMILKNVLICFQFKRPKSVEWILSRGPWHLGGKSMLPGKWVPGIVPKTFVFNSIPVWIKLGRIPMDLWTESDIAITASVIGKLLSLDLATKERRRLSFA

Query:  RMCVE------LEG-LLMSGNPVLVV----------CHSFGHSAGKCPRKEESQVQQEAALPRDQ
        R+C+E      L+G +L++G+   V           C  +GH    CPR    +V   A    D+
Subjt:  RMCVE------LEG-LLMSGNPVLVV----------CHSFGHSAGKCPRKEESQVQQEAALPRDQ

Sequences

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CDS sequence

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ATGCCAACTGTAATGATTCTGAAGAATGTACTTATCTGCTTTCAATTCAAACGACCAAAATCGGTGGAGTGGATTTTGTCCCGTGGTCCGTGGCATCTTGGGGGCAAATC
AATGCTCCCCGGCAAATGGGTTCCAGGTATTGTTCCTAAAACATTTGTTTTTAATTCTATTCCTGTTTGGATAAAATTGGGTCGAATCCCCATGGACTTGTGGACGGAGT
CGGATATTGCAATTACTGCTAGTGTTATTGGTAAACTTCTTTCTTTAGATTTGGCCACTAAGGAAAGACGTAGACTATCGTTTGCTCGGATGTGTGTGGAATTAGAGGGG
TTACTCATGAGTGGAAACCCTGTACTTGTAGTTTGTCATTCATTTGGACATTCTGCGGGGAAGTGTCCTCGAAAGGAGGAATCTCAGGTGCAACAGGAGGCAGCTTTACC
CAGAGACCAAAACGCAAGGCGAATGCGTCCAGCCTCATATCGCAAAGCACACCGCCAGCCTGCAGAACTCCTTCGTTCTCAAATGCCCATTTCGCGTCTCGCAGCACTTC
CTCCAGCCCACCTTAGTGCCCCGGCTTCATCTCACGATTCATCCCACGTTTTGATCTCCCAAGCTCGCAAGCTGCCTTCTCTGCAAAGCTCCATTTCGCCTCGCGTTTTG
CTCAACCGCCAAGCCCATAATCTGGCCCAAAGCCCACTGTAA

mRNA sequence

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Protein sequence

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MPTVMILKNVLICFQFKRPKSVEWILSRGPWHLGGKSMLPGKWVPGIVPKTFVFNSIPVWIKLGRIPMDLWTESDIAITASVIGKLLSLDLATKERRRLSFARMCVELEG
LLMSGNPVLVVCHSFGHSAGKCPRKEESQVQQEAALPRDQNARRMRPASYRKAHRQPAELLRSQMPISRLAALPPAHLSAPASSHDSSHVLISQARKLPSLQSSISPRVL
LNRQAHNLAQSPL

PI0016586 (gene) of Melon (PI 482460) v1 genome