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PI0016615 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016615
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionextensin-3-like
Genome locationchr03:9609086..9609556
RNA-Seq ExpressionPI0016615
SyntenyPI0016615
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058946.1 extensin-3-like [Cucumis melo var. makuwa]4.6e-3470.49Show/hide
Query:  MSLLFLNLPSNFAAHYIPSALPSPPRMPPTFRPIVPYHPFIFPPPSFKKTFKHTWLPPPSPRQQELERPIVPYCPYKFPPPPSRKQTHPPPSYVAFPPLA
        M LL  NLPSNFA HYIP +L SPP MPPT +PIVPYHPFI PPP FKKT KHTW P   P Q+EL RPIVPY PYKF PPP RK  HPPP Y  FPP  
Subjt:  MSLLFLNLPSNFAAHYIPSALPSPPRMPPTFRPIVPYHPFIFPPPSFKKTFKHTWLPPPSPRQQELERPIVPYCPYKFPPPPSRKQTHPPPSYVAFPPLA

Query:  LPLPAKKLYMSEARRAAPPPPP
        LP  AKKL+MS AR+AAP PPP
Subjt:  LPLPAKKLYMSEARRAAPPPPP

KAA0058948.1 extensin-3-like [Cucumis melo var. makuwa]8.0e-3982.41Show/hide
Query:  MPPTFRPIVPYHPFIFPPPSFKKTF-KHTWLPPPSPRQQELERPIVPYCPYKFPPPPSRKQTHPPPSYVAFPPLALPLPAKKLYMSEARRAAPPPPPIKP
        MP   RPIVPYHPFIFPPP FKK F +HTWLPPP P QQ+LERPIVPY PYKFPPPPSRKQ +PP SY AFPP  LPLPAKKLYMSE RRAAPPPPP KP
Subjt:  MPPTFRPIVPYHPFIFPPPSFKKTF-KHTWLPPPSPRQQELERPIVPYCPYKFPPPPSRKQTHPPPSYVAFPPLALPLPAKKLYMSEARRAAPPPPPIKP

Query:  YQWPKGKI
        YQWPKGKI
Subjt:  YQWPKGKI

KAE8647164.1 hypothetical protein Csa_018816, partial [Cucumis sativus]1.6e-4779.85Show/hide
Query:  MSLLFLNLPSNFAAHYIPSALPSPPRMPPTFRPIVPYHPFIFPPPSFKKTFKHTWLPPPS-PRQQELERPIVPYCPYKFPPPPSRKQTHPPPSYVAFPPL
        MSLL LNLPSN A H IPS+L SPP MPP  RPIVP+HPF FP P F+KTF+HTWLPPPS P QQELERPIVPY PYKFPPPPSRKQ +PPPSY AFPP 
Subjt:  MSLLFLNLPSNFAAHYIPSALPSPPRMPPTFRPIVPYHPFIFPPPSFKKTFKHTWLPPPS-PRQQELERPIVPYCPYKFPPPPSRKQTHPPPSYVAFPPL

Query:  ALPLPAKKLYMSEARRAAPPPPPIKPYQWPKGKI
        AL L A+KLYMSE RRA PPPPPIKPYQWPKGKI
Subjt:  ALPLPAKKLYMSEARRAAPPPPPIKPYQWPKGKI

TYK10982.1 extensin-3-like [Cucumis melo var. makuwa]4.6e-3470.49Show/hide
Query:  MSLLFLNLPSNFAAHYIPSALPSPPRMPPTFRPIVPYHPFIFPPPSFKKTFKHTWLPPPSPRQQELERPIVPYCPYKFPPPPSRKQTHPPPSYVAFPPLA
        M LL  NLPSNFA HYIP +L SPP MPPT +PIVPYHPFI PPP FKKT KHTW P   P Q+EL RPIVPY PYKF PPP RK  HPPP Y  FPP  
Subjt:  MSLLFLNLPSNFAAHYIPSALPSPPRMPPTFRPIVPYHPFIFPPPSFKKTFKHTWLPPPSPRQQELERPIVPYCPYKFPPPPSRKQTHPPPSYVAFPPLA

Query:  LPLPAKKLYMSEARRAAPPPPP
        LP  AKKL+MS AR+AAP PPP
Subjt:  LPLPAKKLYMSEARRAAPPPPP

XP_008466986.1 PREDICTED: extensin-3-like, partial [Cucumis melo]5.2e-4681.25Show/hide
Query:  MESHNPIFVLFLFIIMSLLFLNLPSNFAAHYIPSALPSPPRMPPTFRPIVPYHPFIFPPPSFKKTF-KHTWLPPPSPRQQELERPIVPYCPYKFPPPPSR
        MESHNPIFV FLFII+ LL LNLPSNFAAHYIPS+L SPP MP   RPIVPYHPFIFPPP FKK F +HTWLPPP P QQ+LERPIVPY PYKFPPPPSR
Subjt:  MESHNPIFVLFLFIIMSLLFLNLPSNFAAHYIPSALPSPPRMPPTFRPIVPYHPFIFPPPSFKKTF-KHTWLPPPSPRQQELERPIVPYCPYKFPPPPSR

Query:  KQTHPPPSYVAFPPLALPLPAKKLYMSE
        KQ +PP SY AFPP  LPLPAKKLYMSE
Subjt:  KQTHPPPSYVAFPPLALPLPAKKLYMSE

TrEMBL top hitse value%identityAlignment
A0A0A0KD80 Uncharacterized protein5.8e-5981.53Show/hide
Query:  MESHNPIFVLFLFIIMSLLFLNLPSNFAAHYIPSALPSPPRMPPTFRPIVPYHPFIFPPPSFKKTFKHTWLPPPS-PRQQELERPIVPYCPYKFPPPPSR
        MES NPIFV FLFIIMSLL LNLPSN A H IPS+L SPP MPP  RPIVP+HPF FP P F+KTF+HTWLPPPS P QQELERPIVPY PYKFPPPPSR
Subjt:  MESHNPIFVLFLFIIMSLLFLNLPSNFAAHYIPSALPSPPRMPPTFRPIVPYHPFIFPPPSFKKTFKHTWLPPPS-PRQQELERPIVPYCPYKFPPPPSR

Query:  KQTHPPPSYVAFPPLALPLPAKKLYMSEARRAAPPPPPIKPYQWPKGKIRKSPPPPF
        KQ +PPPSY AFPP AL L A+KLYMSE RRA PPPPPIKPYQWPKGKIRKSPPPPF
Subjt:  KQTHPPPSYVAFPPLALPLPAKKLYMSEARRAAPPPPPIKPYQWPKGKIRKSPPPPF

A0A1S3CSG8 extensin-3-like2.5e-4681.25Show/hide
Query:  MESHNPIFVLFLFIIMSLLFLNLPSNFAAHYIPSALPSPPRMPPTFRPIVPYHPFIFPPPSFKKTF-KHTWLPPPSPRQQELERPIVPYCPYKFPPPPSR
        MESHNPIFV FLFII+ LL LNLPSNFAAHYIPS+L SPP MP   RPIVPYHPFIFPPP FKK F +HTWLPPP P QQ+LERPIVPY PYKFPPPPSR
Subjt:  MESHNPIFVLFLFIIMSLLFLNLPSNFAAHYIPSALPSPPRMPPTFRPIVPYHPFIFPPPSFKKTF-KHTWLPPPSPRQQELERPIVPYCPYKFPPPPSR

Query:  KQTHPPPSYVAFPPLALPLPAKKLYMSE
        KQ +PP SY AFPP  LPLPAKKLYMSE
Subjt:  KQTHPPPSYVAFPPLALPLPAKKLYMSE

A0A5A7UXN4 Extensin-3-like2.2e-3470.49Show/hide
Query:  MSLLFLNLPSNFAAHYIPSALPSPPRMPPTFRPIVPYHPFIFPPPSFKKTFKHTWLPPPSPRQQELERPIVPYCPYKFPPPPSRKQTHPPPSYVAFPPLA
        M LL  NLPSNFA HYIP +L SPP MPPT +PIVPYHPFI PPP FKKT KHTW P   P Q+EL RPIVPY PYKF PPP RK  HPPP Y  FPP  
Subjt:  MSLLFLNLPSNFAAHYIPSALPSPPRMPPTFRPIVPYHPFIFPPPSFKKTFKHTWLPPPSPRQQELERPIVPYCPYKFPPPPSRKQTHPPPSYVAFPPLA

Query:  LPLPAKKLYMSEARRAAPPPPP
        LP  AKKL+MS AR+AAP PPP
Subjt:  LPLPAKKLYMSEARRAAPPPPP

A0A5D3CI60 Extensin-3-like2.2e-3470.49Show/hide
Query:  MSLLFLNLPSNFAAHYIPSALPSPPRMPPTFRPIVPYHPFIFPPPSFKKTFKHTWLPPPSPRQQELERPIVPYCPYKFPPPPSRKQTHPPPSYVAFPPLA
        M LL  NLPSNFA HYIP +L SPP MPPT +PIVPYHPFI PPP FKKT KHTW P   P Q+EL RPIVPY PYKF PPP RK  HPPP Y  FPP  
Subjt:  MSLLFLNLPSNFAAHYIPSALPSPPRMPPTFRPIVPYHPFIFPPPSFKKTFKHTWLPPPSPRQQELERPIVPYCPYKFPPPPSRKQTHPPPSYVAFPPLA

Query:  LPLPAKKLYMSEARRAAPPPPP
        LP  AKKL+MS AR+AAP PPP
Subjt:  LPLPAKKLYMSEARRAAPPPPP

A0A5D3CVI1 Extensin-3-like3.9e-3982.41Show/hide
Query:  MPPTFRPIVPYHPFIFPPPSFKKTF-KHTWLPPPSPRQQELERPIVPYCPYKFPPPPSRKQTHPPPSYVAFPPLALPLPAKKLYMSEARRAAPPPPPIKP
        MP   RPIVPYHPFIFPPP FKK F +HTWLPPP P QQ+LERPIVPY PYKFPPPPSRKQ +PP SY AFPP  LPLPAKKLYMSE RRAAPPPPP KP
Subjt:  MPPTFRPIVPYHPFIFPPPSFKKTF-KHTWLPPPSPRQQELERPIVPYCPYKFPPPPSRKQTHPPPSYVAFPPLALPLPAKKLYMSEARRAAPPPPPIKP

Query:  YQWPKGKI
        YQWPKGKI
Subjt:  YQWPKGKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCACATAACCCCATTTTTGTGTTATTCCTCTTCATCATCATGTCATTGCTCTTTTTAAATCTGCCATCAAATTTTGCTGCACACTATATTCCCTCAGCTCTTCC
GTCGCCGCCGCGGATGCCACCTACCTTTAGACCTATAGTCCCTTATCACCCGTTTATATTCCCTCCTCCTTCATTTAAGAAAACTTTTAAACACACATGGTTGCCACCAC
CGTCGCCGCGGCAACAAGAATTAGAAAGGCCAATAGTTCCTTATTGTCCCTATAAATTTCCACCACCTCCATCAAGAAAACAGACCCATCCTCCTCCAAGCTACGTTGCC
TTTCCTCCACTAGCCTTACCGCTTCCAGCGAAAAAGCTTTACATGTCTGAGGCAAGGAGGGCAGCGCCTCCACCACCGCCTATAAAGCCATATCAGTGGCCAAAAGGGAA
GATCCGTAAATCACCCCCACCTCCTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCACATAACCCCATTTTTGTGTTATTCCTCTTCATCATCATGTCATTGCTCTTTTTAAATCTGCCATCAAATTTTGCTGCACACTATATTCCCTCAGCTCTTCC
GTCGCCGCCGCGGATGCCACCTACCTTTAGACCTATAGTCCCTTATCACCCGTTTATATTCCCTCCTCCTTCATTTAAGAAAACTTTTAAACACACATGGTTGCCACCAC
CGTCGCCGCGGCAACAAGAATTAGAAAGGCCAATAGTTCCTTATTGTCCCTATAAATTTCCACCACCTCCATCAAGAAAACAGACCCATCCTCCTCCAAGCTACGTTGCC
TTTCCTCCACTAGCCTTACCGCTTCCAGCGAAAAAGCTTTACATGTCTGAGGCAAGGAGGGCAGCGCCTCCACCACCGCCTATAAAGCCATATCAGTGGCCAAAAGGGAA
GATCCGTAAATCACCCCCACCTCCTTTCTAA
Protein sequenceShow/hide protein sequence
MESHNPIFVLFLFIIMSLLFLNLPSNFAAHYIPSALPSPPRMPPTFRPIVPYHPFIFPPPSFKKTFKHTWLPPPSPRQQELERPIVPYCPYKFPPPPSRKQTHPPPSYVA
FPPLALPLPAKKLYMSEARRAAPPPPPIKPYQWPKGKIRKSPPPPF