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PI0016618 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016618
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr05:7276812..7278017
RNA-Seq ExpressionPI0016618
SyntenyPI0016618
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045193.1 hypothetical protein E6C27_scaffold30G001940 [Cucumis melo var. makuwa]1.4e-2461.68Show/hide
Query:  NAAPENAHPILIAHDLNRPMREYASPNLYDFNPGIAYPVFGDNAKFKMKSVMLQMIQTAGQFRGYLGEDPHDHIKSFYSICSSFHMPSITQK--IITYLS
        N A EN  PILIAH+LN P+ EYASP+LY FN GI YP FG NA+FKMK  ML MIQT  QF GYL EDP DHIKS Y +CSSFH+P ++Q+   ITY +
Subjt:  NAAPENAHPILIAHDLNRPMREYASPNLYDFNPGIAYPVFGDNAKFKMKSVMLQMIQTAGQFRGYLGEDPHDHIKSFYSICSSFHMPSITQK--IITYLS

Query:  VINKAHI
           K  I
Subjt:  VINKAHI

KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]3.3e-2355Show/hide
Query:  LNNQGIPLNPNAAPENAHPILIAHDLNRPMREYASPNLYDFNPGIAYPVFGDNAKFKMKSVMLQMIQTAGQFRGYLGEDPHDHIKSFYSICSSFHMPSIT
        +NNQ  P   N   +N  P  +AHDL++P++ YASPNLYDFNPGIAY  FG+N  F++K +ML M Q AGQF G+  EDP+DHI++FY IC+SF+M  I+
Subjt:  LNNQGIPLNPNAAPENAHPILIAHDLNRPMREYASPNLYDFNPGIAYPVFGDNAKFKMKSVMLQMIQTAGQFRGYLGEDPHDHIKSFYSICSSFHMPSIT

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]3.1e-2962.14Show/hide
Query:  MANLNNQGIPLNPNAAPENAHPILIAHDLNRPMREYASPNLYDFNPGIAYPVFGDNAKFKMKSVMLQMIQTAGQFRGYLGEDPHDHIKSFYSICSSFHMP
        M N NNQGIP   N A + A+P  +A D +RP+R YASPNLYDFNPGIAYP F +N +F++K VMLQ+IQ AGQFR +  +DPHD+I++FYSIC+SFHMP
Subjt:  MANLNNQGIPLNPNAAPENAHPILIAHDLNRPMREYASPNLYDFNPGIAYPVFGDNAKFKMKSVMLQMIQTAGQFRGYLGEDPHDHIKSFYSICSSFHMP

Query:  SIT
         I+
Subjt:  SIT

TYK02149.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]2.5e-2662.14Show/hide
Query:  MANLNNQGIPLNPNAAPENAHPILIAHDLNRPMREYASPNLYDFNPGIAYPVFGDNAKFKMKSVMLQMIQTAGQFRGYLGEDPHDHIKSFYSICSSFHMP
        MA+  N  +PLN +A     +  LIAH+L+ P+R Y S NLYDFN GIAY VFG+NA F++K VMLQMIQ AGQF GY GEDPH+HIKSFYSIC+SFHM 
Subjt:  MANLNNQGIPLNPNAAPENAHPILIAHDLNRPMREYASPNLYDFNPGIAYPVFGDNAKFKMKSVMLQMIQTAGQFRGYLGEDPHDHIKSFYSICSSFHMP

Query:  SIT
        + +
Subjt:  SIT

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]3.0e-2458.25Show/hide
Query:  GIPLNPNA---APENAHPILIAHDLNRPMREYASPNLYDFNPGIAYPVFGDNAKFKMKSVMLQMIQTAGQFRGYLGEDPHDHIKSFYSICSSFHMPSITQ
        G+  N NA   A  + +PI++AHD NRPMREYASPNLY+F PGI  P F  N +F+MK VMLQM+Q AGQF G  GEDPH H+KSF  ICS+F M  + Q
Subjt:  GIPLNPNA---APENAHPILIAHDLNRPMREYASPNLYDFNPGIAYPVFGDNAKFKMKSVMLQMIQTAGQFRGYLGEDPHDHIKSFYSICSSFHMPSITQ

Query:  KII
          I
Subjt:  KII

TrEMBL top hitse value%identityAlignment
A0A5A7TNS8 Uncharacterized protein6.6e-2561.68Show/hide
Query:  NAAPENAHPILIAHDLNRPMREYASPNLYDFNPGIAYPVFGDNAKFKMKSVMLQMIQTAGQFRGYLGEDPHDHIKSFYSICSSFHMPSITQK--IITYLS
        N A EN  PILIAH+LN P+ EYASP+LY FN GI YP FG NA+FKMK  ML MIQT  QF GYL EDP DHIKS Y +CSSFH+P ++Q+   ITY +
Subjt:  NAAPENAHPILIAHDLNRPMREYASPNLYDFNPGIAYPVFGDNAKFKMKSVMLQMIQTAGQFRGYLGEDPHDHIKSFYSICSSFHMPSITQK--IITYLS

Query:  VINKAHI
           K  I
Subjt:  VINKAHI

A0A5A7UDN8 Uncharacterized protein1.6e-2355Show/hide
Query:  LNNQGIPLNPNAAPENAHPILIAHDLNRPMREYASPNLYDFNPGIAYPVFGDNAKFKMKSVMLQMIQTAGQFRGYLGEDPHDHIKSFYSICSSFHMPSIT
        +NNQ  P   N   +N  P  +AHDL++P++ YASPNLYDFNPGIAY  FG+N  F++K +ML M Q AGQF G+  EDP+DHI++FY IC+SF+M  I+
Subjt:  LNNQGIPLNPNAAPENAHPILIAHDLNRPMREYASPNLYDFNPGIAYPVFGDNAKFKMKSVMLQMIQTAGQFRGYLGEDPHDHIKSFYSICSSFHMPSIT

A0A5A7V2U7 Putative disease resistance RPP13-like protein 11.5e-2962.14Show/hide
Query:  MANLNNQGIPLNPNAAPENAHPILIAHDLNRPMREYASPNLYDFNPGIAYPVFGDNAKFKMKSVMLQMIQTAGQFRGYLGEDPHDHIKSFYSICSSFHMP
        M N NNQGIP   N A + A+P  +A D +RP+R YASPNLYDFNPGIAYP F +N +F++K VMLQ+IQ AGQFR +  +DPHD+I++FYSIC+SFHMP
Subjt:  MANLNNQGIPLNPNAAPENAHPILIAHDLNRPMREYASPNLYDFNPGIAYPVFGDNAKFKMKSVMLQMIQTAGQFRGYLGEDPHDHIKSFYSICSSFHMP

Query:  SIT
         I+
Subjt:  SIT

A0A5D3BVN1 Putative disease resistance RPP13-like protein 11.2e-2662.14Show/hide
Query:  MANLNNQGIPLNPNAAPENAHPILIAHDLNRPMREYASPNLYDFNPGIAYPVFGDNAKFKMKSVMLQMIQTAGQFRGYLGEDPHDHIKSFYSICSSFHMP
        MA+  N  +PLN +A     +  LIAH+L+ P+R Y S NLYDFN GIAY VFG+NA F++K VMLQMIQ AGQF GY GEDPH+HIKSFYSIC+SFHM 
Subjt:  MANLNNQGIPLNPNAAPENAHPILIAHDLNRPMREYASPNLYDFNPGIAYPVFGDNAKFKMKSVMLQMIQTAGQFRGYLGEDPHDHIKSFYSICSSFHMP

Query:  SIT
        + +
Subjt:  SIT

U5CUI2 Retrotrans_gag domain-containing protein6.4e-1240.22Show/hide
Query:  APENAHPILIAHDLNRPMREYASPNLYDFNPGIAYPVFGDNAKFKMKSVMLQMIQTAGQFRGYLGEDPHDHIKSFYSICSSFHMPSITQKII
        A +  +PI++A D  R +REYA+P   + NPGI  P      +F++K VM QM+QT GQF G   EDPH H++SF  +  SF +  ++++++
Subjt:  APENAHPILIAHDLNRPMREYASPNLYDFNPGIAYPVFGDNAKFKMKSVMLQMIQTAGQFRGYLGEDPHDHIKSFYSICSSFHMPSITQKII

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAATTTGAATAACCAAGGAATCCCTTTGAACCCTAATGCTGCCCCGGAGAACGCCCATCCTATTCTAATAGCCCATGACCTGAATAGACCCATGAGAGAATATGC
ATCTCCCAACTTGTATGACTTCAACCCAGGTATCGCCTATCCTGTATTTGGCGACAATGCCAAATTCAAGATGAAGTCGGTCATGCTTCAAATGATCCAAACTGCTGGCC
AATTTAGGGGATACTTAGGCGAAGATCCACATGACCACATCAAGAGTTTCTATTCTATATGTTCTTCCTTTCATATGCCTAGCATAACACAAAAGATAATCACATACCTA
AGTGTCATCAATAAGGCACACATCTATTTGTTTGGTAACTCAATTCTAATGCATTTCGAGCAAACAAATGGTAAAATTCGGAGCTCATGTCAATTTAGAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAATTTGAATAACCAAGGAATCCCTTTGAACCCTAATGCTGCCCCGGAGAACGCCCATCCTATTCTAATAGCCCATGACCTGAATAGACCCATGAGAGAATATGC
ATCTCCCAACTTGTATGACTTCAACCCAGGTATCGCCTATCCTGTATTTGGCGACAATGCCAAATTCAAGATGAAGTCGGTCATGCTTCAAATGATCCAAACTGCTGGCC
AATTTAGGGGATACTTAGGCGAAGATCCACATGACCACATCAAGAGTTTCTATTCTATATGTTCTTCCTTTCATATGCCTAGCATAACACAAAAGATAATCACATACCTA
AGTGTCATCAATAAGGCACACATCTATTTGTTTGGTAACTCAATTCTAATGCATTTCGAGCAAACAAATGGTAAAATTCGGAGCTCATGTCAATTTAGAGCTTAA
Protein sequenceShow/hide protein sequence
MANLNNQGIPLNPNAAPENAHPILIAHDLNRPMREYASPNLYDFNPGIAYPVFGDNAKFKMKSVMLQMIQTAGQFRGYLGEDPHDHIKSFYSICSSFHMPSITQKIITYL
SVINKAHIYLFGNSILMHFEQTNGKIRSSCQFRA