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PI0016646 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016646
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr04:17083339..17084027
RNA-Seq ExpressionPI0016646
SyntenyPI0016646
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047075.1 retrotransposon protein [Cucumis melo var. makuwa]1.3e-6261.11Show/hide
Query:  MIAARMPGHNITATTIDCRIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATGGRAEIFGD
        M+A ++PG NI A+TID RIK +KR F A++EMRGP CSGFGWNDE KCI+ EK+LFD WVKSHP AKGLLNK F+HYD+L YVFG+DRATGGRAE F D
Subjt:  MIAARMPGHNITATTIDCRIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATGGRAEIFGD

Query:  VGSNVPLGFEGFTQYDGNDVENPTMCSQGLDMSPDDIMIPRSVRMSEARPGSSESKRKHGGQTLEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASGT
        +GSN P G++ F      D     M S GL+MSPDD+M  R+VR+SE R  SS SKRK  G   ++ +I+ +A+EY N+QL  IAEWP  QRQDAS T
Subjt:  VGSNVPLGFEGFTQYDGNDVENPTMCSQGLDMSPDDIMIPRSVRMSEARPGSSESKRKHGGQTLEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASGT

KAA0048374.1 retrotransposon protein [Cucumis melo var. makuwa]1.8e-6260.1Show/hide
Query:  MIAARMPGHNITATTIDCRIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATGGRAEIFGD
        M+A ++P  N+ A+TID RIK LKR F AI EMRGPTCSGFGWNDE KCI+AEK++FD WV+SHPAAKGLLNK F HYD+L YVF +D ATGGRAE F D
Subjt:  MIAARMPGHNITATTIDCRIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATGGRAEIFGD

Query:  VGSNVPLGFEGFTQYDGNDVENPTMCSQGLDMSPDDIMIPRSVRMSEARPGSSESKRKHGGQTLEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASGT
        VGSN P G++ F     +D +   M S+GL+MSPD++M  R+ R+SE R  SS SK+K GG T+++ +I+R+A+EY N+QL  IAEW   QRQDA+ T
Subjt:  VGSNVPLGFEGFTQYDGNDVENPTMCSQGLDMSPDDIMIPRSVRMSEARPGSSESKRKHGGQTLEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASGT

KAA0050782.1 retrotransposon protein [Cucumis melo var. makuwa]1.8e-6260.61Show/hide
Query:  MIAARMPGHNITATTIDCRIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATGGRAEIFGD
        M+A ++PG NI A+TID RIK +KR F A+++MR P CSGFGWNDE KCIIAEK++FD WVKSHPAAKGLLNK F+HYD+L YVFG+DRATGGRAE F D
Subjt:  MIAARMPGHNITATTIDCRIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATGGRAEIFGD

Query:  VGSNVPLGFEGFTQYDGNDVENPTMCSQGLDMSPDDIMIPRSVRMSEARPGSSESKRKHGGQTLEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASGT
        +GSN P G++ F      D + P M S GL+MSPDD+M  R+ R+SE R  SS SK K  G   ++ +I+R+A+EY N+QL  IAEWP  QRQDA+ T
Subjt:  VGSNVPLGFEGFTQYDGNDVENPTMCSQGLDMSPDDIMIPRSVRMSEARPGSSESKRKHGGQTLEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASGT

KAA0065737.1 retrotransposon protein [Cucumis melo var. makuwa]6.7e-6260.61Show/hide
Query:  MIAARMPGHNITATTIDCRIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATGGRAEIFGD
        M+  ++PG NI A+TID RIK +KR F A++EMRGP CSGFGWNDE KCI+AEK++FD W  SHPAAKGLLNK F+HYD+L YVFG+DRATGGRAE F D
Subjt:  MIAARMPGHNITATTIDCRIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATGGRAEIFGD

Query:  VGSNVPLGFEGFTQYDGNDVENPTMCSQGLDMSPDDIMIPRSVRMSEARPGSSESKRKHGGQTLEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASGT
        +GSN P G++ F      D + P M S GL+MSPDD+M  R+ R+SE R  SSESKRK  G   ++ +I+R+A+EY N+QL  IAEWP  QRQDA+ T
Subjt:  VGSNVPLGFEGFTQYDGNDVENPTMCSQGLDMSPDDIMIPRSVRMSEARPGSSESKRKHGGQTLEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASGT

TYK05082.1 retrotransposon protein [Cucumis melo var. makuwa]2.1e-6361.62Show/hide
Query:  MIAARMPGHNITATTIDCRIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATGGRAEIFGD
        M+A ++PG NI A+TID RIK +KR F A++EMRGP CSGFGWNDE KCI+ EK+LFD WVKSHPAAKGLLNK F+HYD+L YVFG+DRATGGRAE F D
Subjt:  MIAARMPGHNITATTIDCRIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATGGRAEIFGD

Query:  VGSNVPLGFEGFTQYDGNDVENPTMCSQGLDMSPDDIMIPRSVRMSEARPGSSESKRKHGGQTLEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASGT
        +GSN P G++        D + P M S GL+MSPDD+M  R+ R+SE R  SS SKRK  G   ++ +I+R+A+EY N+QL  IAEWP  QRQDAS T
Subjt:  VGSNVPLGFEGFTQYDGNDVENPTMCSQGLDMSPDDIMIPRSVRMSEARPGSSESKRKHGGQTLEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASGT

TrEMBL top hitse value%identityAlignment
A0A5A7TZA5 Retrotransposon protein8.5e-6360.1Show/hide
Query:  MIAARMPGHNITATTIDCRIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATGGRAEIFGD
        M+A ++P  N+ A+TID RIK LKR F AI EMRGPTCSGFGWNDE KCI+AEK++FD WV+SHPAAKGLLNK F HYD+L YVF +D ATGGRAE F D
Subjt:  MIAARMPGHNITATTIDCRIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATGGRAEIFGD

Query:  VGSNVPLGFEGFTQYDGNDVENPTMCSQGLDMSPDDIMIPRSVRMSEARPGSSESKRKHGGQTLEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASGT
        VGSN P G++ F     +D +   M S+GL+MSPD++M  R+ R+SE R  SS SK+K GG T+++ +I+R+A+EY N+QL  IAEW   QRQDA+ T
Subjt:  VGSNVPLGFEGFTQYDGNDVENPTMCSQGLDMSPDDIMIPRSVRMSEARPGSSESKRKHGGQTLEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASGT

A0A5A7U098 Retrotransposon protein6.5e-6361.11Show/hide
Query:  MIAARMPGHNITATTIDCRIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATGGRAEIFGD
        M+A ++PG NI A+TID RIK +KR F A++EMRGP CSGFGWNDE KCI+ EK+LFD WVKSHP AKGLLNK F+HYD+L YVFG+DRATGGRAE F D
Subjt:  MIAARMPGHNITATTIDCRIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATGGRAEIFGD

Query:  VGSNVPLGFEGFTQYDGNDVENPTMCSQGLDMSPDDIMIPRSVRMSEARPGSSESKRKHGGQTLEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASGT
        +GSN P G++ F      D     M S GL+MSPDD+M  R+VR+SE R  SS SKRK  G   ++ +I+ +A+EY N+QL  IAEWP  QRQDAS T
Subjt:  VGSNVPLGFEGFTQYDGNDVENPTMCSQGLDMSPDDIMIPRSVRMSEARPGSSESKRKHGGQTLEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASGT

A0A5A7U4M2 Retrotransposon protein8.5e-6360.61Show/hide
Query:  MIAARMPGHNITATTIDCRIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATGGRAEIFGD
        M+A ++PG NI A+TID RIK +KR F A+++MR P CSGFGWNDE KCIIAEK++FD WVKSHPAAKGLLNK F+HYD+L YVFG+DRATGGRAE F D
Subjt:  MIAARMPGHNITATTIDCRIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATGGRAEIFGD

Query:  VGSNVPLGFEGFTQYDGNDVENPTMCSQGLDMSPDDIMIPRSVRMSEARPGSSESKRKHGGQTLEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASGT
        +GSN P G++ F      D + P M S GL+MSPDD+M  R+ R+SE R  SS SK K  G   ++ +I+R+A+EY N+QL  IAEWP  QRQDA+ T
Subjt:  VGSNVPLGFEGFTQYDGNDVENPTMCSQGLDMSPDDIMIPRSVRMSEARPGSSESKRKHGGQTLEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASGT

A0A5A7VF53 Retrotransposon protein3.2e-6260.61Show/hide
Query:  MIAARMPGHNITATTIDCRIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATGGRAEIFGD
        M+  ++PG NI A+TID RIK +KR F A++EMRGP CSGFGWNDE KCI+AEK++FD W  SHPAAKGLLNK F+HYD+L YVFG+DRATGGRAE F D
Subjt:  MIAARMPGHNITATTIDCRIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATGGRAEIFGD

Query:  VGSNVPLGFEGFTQYDGNDVENPTMCSQGLDMSPDDIMIPRSVRMSEARPGSSESKRKHGGQTLEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASGT
        +GSN P G++ F      D + P M S GL+MSPDD+M  R+ R+SE R  SSESKRK  G   ++ +I+R+A+EY N+QL  IAEWP  QRQDA+ T
Subjt:  VGSNVPLGFEGFTQYDGNDVENPTMCSQGLDMSPDDIMIPRSVRMSEARPGSSESKRKHGGQTLEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASGT

A0A5D3C1M0 Retrotransposon protein1.0e-6361.62Show/hide
Query:  MIAARMPGHNITATTIDCRIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATGGRAEIFGD
        M+A ++PG NI A+TID RIK +KR F A++EMRGP CSGFGWNDE KCI+ EK+LFD WVKSHPAAKGLLNK F+HYD+L YVFG+DRATGGRAE F D
Subjt:  MIAARMPGHNITATTIDCRIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATGGRAEIFGD

Query:  VGSNVPLGFEGFTQYDGNDVENPTMCSQGLDMSPDDIMIPRSVRMSEARPGSSESKRKHGGQTLEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASGT
        +GSN P G++        D + P M S GL+MSPDD+M  R+ R+SE R  SS SKRK  G   ++ +I+R+A+EY N+QL  IAEWP  QRQDAS T
Subjt:  VGSNVPLGFEGFTQYDGNDVENPTMCSQGLDMSPDDIMIPRSVRMSEARPGSSESKRKHGGQTLEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASGT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30140.1 unknown protein1.0e-0733.77Show/hide
Query:  RIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATGGRA
        R+K LK  +Q+  +++    SGFGW+ E K   A  +++  ++K+HP  K +  +   H++DL  +FG   ATG  A
Subjt:  RIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATGGRA

AT2G24960.1 unknown protein9.5e-0633.96Show/hide
Query:  GFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATG
        GF W+   + +I +  L+  ++K+HP A+    KP L++ DLC ++G   A G
Subjt:  GFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATG

AT2G24960.2 unknown protein2.9e-0728.38Show/hide
Query:  RIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATG
        R K L+R +  I  +     +GF W+     +IA+ D++++++++HP A+    K    Y +LC++FG++ + G
Subjt:  RIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATG

AT4G02210.1 unknown protein1.7e-0728.57Show/hide
Query:  NITATTIDCRIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFG
        N     +  R K+L+R F AI  +      GF W++E + + A+ +++  ++K+H  A+  + +P  +Y DLC + G
Subjt:  NITATTIDCRIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFG

AT4G02210.2 unknown protein1.7e-0728.57Show/hide
Query:  NITATTIDCRIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFG
        N     +  R K+L+R F AI  +      GF W++E + + A+ +++  ++K+H  A+  + +P  +Y DLC + G
Subjt:  NITATTIDCRIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGCTGCGAGGATGCCCGGACATAACATAACGGCTACGACAATAGATTGTCGGATCAAGACATTGAAAAGAGCATTCCAAGCGATATCTGAGATGAGGGGCCCGAC
GTGTAGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATCATTGCCGAGAAAGACTTGTTCGACAGTTGGGTGAAGAGTCATCCAGCCGCAAAGGGCCTCCTAAACAAAC
CCTTTCTCCACTACGACGACCTCTGCTACGTGTTCGGAAGAGATCGTGCAACAGGAGGTCGAGCTGAAATCTTCGGTGATGTTGGGTCGAACGTGCCTCTAGGCTTCGAA
GGATTTACCCAGTACGACGGGAACGATGTGGAGAACCCGACAATGTGCAGTCAGGGCCTGGACATGTCACCTGACGACATAATGATTCCACGATCGGTTCGTATGTCTGA
GGCTAGGCCTGGTTCGAGCGAGTCGAAGAGGAAACATGGAGGGCAGACATTGGAGGCGGCTGAAATTATTCGTAGTGCCATGGAATATGCCAATGACCAACTTAAGGCCA
TTGCAGAATGGCCCAAGGAACAACGGCAAGATGCAAGTGGGACATGCGGAAGTCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTGCTGCGAGGATGCCCGGACATAACATAACGGCTACGACAATAGATTGTCGGATCAAGACATTGAAAAGAGCATTCCAAGCGATATCTGAGATGAGGGGCCCGAC
GTGTAGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATCATTGCCGAGAAAGACTTGTTCGACAGTTGGGTGAAGAGTCATCCAGCCGCAAAGGGCCTCCTAAACAAAC
CCTTTCTCCACTACGACGACCTCTGCTACGTGTTCGGAAGAGATCGTGCAACAGGAGGTCGAGCTGAAATCTTCGGTGATGTTGGGTCGAACGTGCCTCTAGGCTTCGAA
GGATTTACCCAGTACGACGGGAACGATGTGGAGAACCCGACAATGTGCAGTCAGGGCCTGGACATGTCACCTGACGACATAATGATTCCACGATCGGTTCGTATGTCTGA
GGCTAGGCCTGGTTCGAGCGAGTCGAAGAGGAAACATGGAGGGCAGACATTGGAGGCGGCTGAAATTATTCGTAGTGCCATGGAATATGCCAATGACCAACTTAAGGCCA
TTGCAGAATGGCCCAAGGAACAACGGCAAGATGCAAGTGGGACATGCGGAAGTCGTTAG
Protein sequenceShow/hide protein sequence
MIAARMPGHNITATTIDCRIKTLKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWVKSHPAAKGLLNKPFLHYDDLCYVFGRDRATGGRAEIFGDVGSNVPLGFE
GFTQYDGNDVENPTMCSQGLDMSPDDIMIPRSVRMSEARPGSSESKRKHGGQTLEAAEIIRSAMEYANDQLKAIAEWPKEQRQDASGTCGSR