; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0016656 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016656
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptiontranscription factor HY5
Genome locationchr04:30213577..30216472
RNA-Seq ExpressionPI0016656
SyntenyPI0016656
Gene Ontology termsGO:0010017 - red or far-red light signaling pathway (biological process)
GO:0010099 - regulation of photomorphogenesis (biological process)
GO:0010114 - response to red light (biological process)
GO:0010218 - response to far red light (biological process)
GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR004827 - Basic-leucine zipper domain
IPR044280 - Transcriptional activator Hac1/HY5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038802.1 transcription factor HY5 [Cucumis melo var. makuwa]1.1e-5392.86Show/hide
Query:  MQGR---AAVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVSISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
        MQGR   AA+SRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQIC NSGSTV ISAPGKAPASDSVRSRGRSAAEKE KRLKRLLRNRVSAQQARE
Subjt:  MQGR---AAVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVSISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE

Query:  RKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHI
        RKK YLSELE+RATNLEKRNSELEEKLSTLQNENQMLRH+
Subjt:  RKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHI

TYK31424.1 transcription factor HY5 [Cucumis melo var. makuwa]4.6e-5594.29Show/hide
Query:  MQGR---AAVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVSISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
        MQGR   AA+SRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTV ISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
Subjt:  MQGR---AAVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVSISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE

Query:  RKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHI
        RKK YLSELE+RATNLEKRNSELEEKLSTLQNENQMLRH+
Subjt:  RKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHI

XP_004136344.1 transcription factor HY5 [Cucumis sativus]7.9e-6394.23Show/hide
Query:  MQGRAA---VSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVSISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
        MQGRA+   VSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTV ISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
Subjt:  MQGRAA---VSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVSISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE

Query:  RKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNTTTTKRSDGDAAK
        RKK YLSELE+RATNLEK+NSELEEKLSTLQNENQMLRHILKNTTT KRSDGDAAK
Subjt:  RKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNTTTTKRSDGDAAK

XP_008466392.1 PREDICTED: transcription factor HY5 [Cucumis melo]1.0e-6292.99Show/hide
Query:  MQGR---AAVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVSISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
        MQGR   AA+SRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTV ISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
Subjt:  MQGR---AAVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVSISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE

Query:  RKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNTTTTKRSDGDAAKC
        RKK YLSELE+RATNLEKRNSELEEKLSTLQNENQMLRHILKNTTT K+SD DA KC
Subjt:  RKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNTTTTKRSDGDAAKC

XP_022981220.1 transcription factor HY5-like isoform X1 [Cucurbita maxima]1.3e-4983.89Show/hide
Query:  AAVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTV-SISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKAYL
        A+ SR RSSSERSSSSAF LDVKEDIG  SDEEEISRVPQICGNS S     SA GKAPASD VRSRGRS+A+KESKRLKRLLRNRVSAQQARERKKAYL
Subjt:  AAVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTV-SISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKAYL

Query:  SELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNTTTTKRSDGDAA
         +LE RA NL KRNSELEE LSTLQNENQMLRHILKNTTT KRSDGD A
Subjt:  SELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNTTTTKRSDGDAA

TrEMBL top hitse value%identityAlignment
A0A0A0LJB7 BZIP domain-containing protein3.8e-6394.23Show/hide
Query:  MQGRAA---VSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVSISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
        MQGRA+   VSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTV ISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
Subjt:  MQGRAA---VSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVSISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE

Query:  RKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNTTTTKRSDGDAAK
        RKK YLSELE+RATNLEK+NSELEEKLSTLQNENQMLRHILKNTTT KRSDGDAAK
Subjt:  RKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNTTTTKRSDGDAAK

A0A1S3CSG2 transcription factor HY55.0e-6392.99Show/hide
Query:  MQGR---AAVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVSISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
        MQGR   AA+SRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTV ISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
Subjt:  MQGR---AAVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVSISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE

Query:  RKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNTTTTKRSDGDAAKC
        RKK YLSELE+RATNLEKRNSELEEKLSTLQNENQMLRHILKNTTT K+SD DA KC
Subjt:  RKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNTTTTKRSDGDAAKC

A0A5A7T5P8 Transcription factor HY55.5e-5492.86Show/hide
Query:  MQGR---AAVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVSISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
        MQGR   AA+SRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQIC NSGSTV ISAPGKAPASDSVRSRGRSAAEKE KRLKRLLRNRVSAQQARE
Subjt:  MQGR---AAVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVSISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE

Query:  RKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHI
        RKK YLSELE+RATNLEKRNSELEEKLSTLQNENQMLRH+
Subjt:  RKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHI

A0A5D3E623 Transcription factor HY52.2e-5594.29Show/hide
Query:  MQGR---AAVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVSISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
        MQGR   AA+SRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTV ISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE
Subjt:  MQGR---AAVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVSISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARE

Query:  RKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHI
        RKK YLSELE+RATNLEKRNSELEEKLSTLQNENQMLRH+
Subjt:  RKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHI

A0A6J1IYV9 transcription factor HY5-like isoform X16.3e-5083.89Show/hide
Query:  AAVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTV-SISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKAYL
        A+ SR RSSSERSSSSAF LDVKEDIG  SDEEEISRVPQICGNS S     SA GKAPASD VRSRGRS+A+KESKRLKRLLRNRVSAQQARERKKAYL
Subjt:  AAVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTV-SISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKAYL

Query:  SELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNTTTTKRSDGDAA
         +LE RA NL KRNSELEE LSTLQNENQMLRHILKNTTT KRSDGD A
Subjt:  SELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNTTTTKRSDGDAA

SwissProt top hitse value%identityAlignment
A2VD01 Cyclic AMP-responsive element-binding protein 3-like protein 21.7e-0442.62Show/hide
Query:  AAEKESKRLKRLLRNRVSAQQARERKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQML
        A EK  K+++R ++N++SAQ++R +KK Y+  LEKR  N    NSEL +K+  L++ N+ L
Subjt:  AAEKESKRLKRLLRNRVSAQQARERKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQML

O24646 Transcription factor HY54.4e-3264.71Show/hide
Query:  AVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICG-----NSGSTVSISAPG----KAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQAR
        A S + SSSERSSSSA  L++KE  G ESD EEI RVP+  G      +    S SA G    +A   +S R RGR+ AEKE+KRLKRLLRNRVSAQQAR
Subjt:  AVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICG-----NSGSTVSISAPG----KAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQAR

Query:  ERKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNTTTTKRSDG
        ERKKAYLSELE R  +LE +NSELEE+LSTLQNENQMLRHILKNTT  KR  G
Subjt:  ERKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNTTTTKRSDG

Q54WN7 Probable basic-leucine zipper transcription factor F6.6e-0441.27Show/hide
Query:  EKESKRLKRLLRNRVSAQQARERKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHIL
        E+  KR +RL++NR +AQ  R+R+KAY+ +LEK+ ++L   NSE   ++  L +EN+++R  L
Subjt:  EKESKRLKRLLRNRVSAQQARERKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHIL

Q8W191 Transcription factor HY5-like3.1e-1444.22Show/hide
Query:  VSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVSISAPG------------KAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQ
        +S  R +   SSSS+ +    E+      +EE+  VP +   +GST  +S+              +   S + R RGR+  +KE + LKRLLRNRVSAQQ
Subjt:  VSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVSISAPG------------KAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQ

Query:  ARERKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNT
        ARERKK Y+S+LE RA  L+  N +LEEK+STL NEN MLR +L NT
Subjt:  ARERKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNT

Q9SM50 Transcription factor HY51.8e-3063.89Show/hide
Query:  AVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVS------ISAPGKA-PASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARER
        A S + SSSERSSSSA   ++KE  G ESD +EI RVP++ G +  T S      +SA G+A P++ + R RGRS A+KE+KRLKRLLRNRVSAQQARER
Subjt:  AVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVS------ISAPGKA-PASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARER

Query:  KKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNTT
        KKAYL +LE R   LE +N+ELEE+LSTLQNENQMLRHILKNTT
Subjt:  KKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNTT

Arabidopsis top hitse value%identityAlignment
AT3G17609.1 HY5-homolog2.0e-1664.1Show/hide
Query:  SDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNT
        S + R RGR+  +KE + LKRLLRNRVSAQQARERKK Y+S+LE RA  L+  N +LEEK+STL NEN MLR +L NT
Subjt:  SDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNT

AT3G17609.2 HY5-homolog2.2e-1544.22Show/hide
Query:  VSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVSISAPG------------KAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQ
        +S  R +   SSSS+ +    E+      +EE+  VP +   +GST  +S+              +   S + R RGR+  +KE + LKRLLRNRVSAQQ
Subjt:  VSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVSISAPG------------KAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQ

Query:  ARERKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNT
        ARERKK Y+S+LE RA  L+  N +LEEK+STL NEN MLR +L NT
Subjt:  ARERKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNT

AT3G17609.3 HY5-homolog2.0e-1664.1Show/hide
Query:  SDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNT
        S + R RGR+  +KE + LKRLLRNRVSAQQARERKK Y+S+LE RA  L+  N +LEEK+STL NEN MLR +L NT
Subjt:  SDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNT

AT3G17609.4 HY5-homolog2.0e-1664.1Show/hide
Query:  SDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNT
        S + R RGR+  +KE + LKRLLRNRVSAQQARERKK Y+S+LE RA  L+  N +LEEK+STL NEN MLR +L NT
Subjt:  SDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNT

AT5G11260.1 Basic-leucine zipper (bZIP) transcription factor family protein3.1e-3364.71Show/hide
Query:  AVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICG-----NSGSTVSISAPG----KAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQAR
        A S + SSSERSSSSA  L++KE  G ESD EEI RVP+  G      +    S SA G    +A   +S R RGR+ AEKE+KRLKRLLRNRVSAQQAR
Subjt:  AVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICG-----NSGSTVSISAPG----KAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQAR

Query:  ERKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNTTTTKRSDG
        ERKKAYLSELE R  +LE +NSELEE+LSTLQNENQMLRHILKNTT  KR  G
Subjt:  ERKKAYLSELEKRATNLEKRNSELEEKLSTLQNENQMLRHILKNTTTTKRSDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGGACGAGCCGCCGTCAGTCGTATGCGCTCGAGTAGTGAAAGATCGTCTAGCTCCGCTTTTCAACTTGATGTTAAAGAAGATATAGGAGCGGAGAGTGATGAGGA
GGAGATAAGCAGAGTTCCGCAGATCTGCGGCAACTCCGGCTCCACCGTCAGCATTTCAGCGCCAGGTAAAGCGCCTGCATCAGATAGCGTAAGGAGCAGAGGACGAAGTG
CGGCTGAGAAAGAAAGCAAAAGGCTGAAGAGATTGTTAAGGAACAGAGTTTCAGCACAACAAGCAAGGGAAAGGAAAAAGGCGTACTTAAGCGAGTTGGAAAAAAGAGCA
ACAAATTTGGAGAAGAGGAACTCGGAGCTTGAAGAGAAGTTGTCCACGTTACAGAATGAGAATCAAATGCTTAGACACATACTAAAGAACACAACAACCACCAAGAGAAG
TGATGGCGACGCTGCTAAATGCTAA
mRNA sequenceShow/hide mRNA sequence
TTTTTTCAGTCCTCTATTTCCTTTTAAGCAGCGTTTTCCAATTTTTTTCTCTCTCACATCAATCTTTTCGGTGTTGATTATTCGCCGGCGTAATGCAGGGACGAGCCGCC
GTCAGTCGTATGCGCTCGAGTAGTGAAAGATCGTCTAGCTCCGCTTTTCAACTTGATGTTAAAGAAGATATAGGAGCGGAGAGTGATGAGGAGGAGATAAGCAGAGTTCC
GCAGATCTGCGGCAACTCCGGCTCCACCGTCAGCATTTCAGCGCCAGGTAAAGCGCCTGCATCAGATAGCGTAAGGAGCAGAGGACGAAGTGCGGCTGAGAAAGAAAGCA
AAAGGCTGAAGAGATTGTTAAGGAACAGAGTTTCAGCACAACAAGCAAGGGAAAGGAAAAAGGCGTACTTAAGCGAGTTGGAAAAAAGAGCAACAAATTTGGAGAAGAGG
AACTCGGAGCTTGAAGAGAAGTTGTCCACGTTACAGAATGAGAATCAAATGCTTAGACACATACTAAAGAACACAACAACCACCAAGAGAAGTGATGGCGACGCTGCTAA
ATGCTAAAGGAAACCAATGGATATAGCTGGTATGACAAAGTAAATTAATTATAGTATTAGTATGTGTACATAATAACCATGTCGACTCGAAAGAAATTAAACGAATAATT
AAGTATGGGGTAGGCTTTAATTTCATGTGTGGGGATAAATTATTTAACATGACTAACACAATATTTGTTGCTTTTAATCATTTGATGTATGATAAAAGAAACTGGAAATT
TCTTGTTAGGTTTTAAAAGTAATTTTGATACTTAAAACTTTTATGAAGGTAGCAGTTTAGTGTATCAAACTTAGTTAAAAATTGTAACAATTTAGTCATTATTCTTCATC
AATTTAACTTTTGATTGATTTATTGATCAAAGTGCATAAAAAAATTA
Protein sequenceShow/hide protein sequence
MQGRAAVSRMRSSSERSSSSAFQLDVKEDIGAESDEEEISRVPQICGNSGSTVSISAPGKAPASDSVRSRGRSAAEKESKRLKRLLRNRVSAQQARERKKAYLSELEKRA
TNLEKRNSELEEKLSTLQNENQMLRHILKNTTTTKRSDGDAAKC