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PI0016692 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016692
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr07:6632515..6633134
RNA-Seq ExpressionPI0016692
SyntenyPI0016692
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFY85402.1 hypothetical protein Acr_04g0001400 [Actinidia rufa]2.3e-0846.81Show/hide
Query:  APRPDFPNLLQFSQMIPPFSNPNP----------YPTLSQLLAIKLNDHNFLLNWKNQLLNVVLTNGLEWILYGTVPPPLKFLDLQQLQHNPDF
        AP P   N L  S  IP   NPNP           P+++Q LA+KL+DHN+++ WK QLLN+V+ NGLE  L G+   P +FLD QQ Q NP+F
Subjt:  APRPDFPNLLQFSQMIPPFSNPNP----------YPTLSQLLAIKLNDHNFLLNWKNQLLNVVLTNGLEWILYGTVPPPLKFLDLQQLQHNPDF

GFZ12741.1 UBX domain-containing protein [Actinidia rufa]8.8e-0845.56Show/hide
Query:  APRPDFPNLLQFSQM---IPPFSNPNP---YPTLSQLLAIKLNDHNFLLNWKNQLLNVVLTNGLEWILYGTVPPPLKFLDLQQLQHNPDF
        AP P   N L  S +    P   N +P    P+++Q LA+KL+DHN+++ WK QLLN+V+ NGLE  L G+   P +FLD QQ Q NP+F
Subjt:  APRPDFPNLLQFSQM---IPPFSNPNP---YPTLSQLLAIKLNDHNFLLNWKNQLLNVVLTNGLEWILYGTVPPPLKFLDLQQLQHNPDF

RVW56403.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]6.1e-0948.35Show/hide
Query:  SPQMFAPRPDF-PNLLQFSQMIPPFSNPNPYPTLSQLLAIKLNDHNFLLNWKNQLLNVVLTNGLEWILYGTVPPPLKFLDLQQLQHNPDFL
        +PQ   P P F PN+ Q +           YP+LSQ L IKL++ N  L WKNQLLNV++ NGLE  + G  P P KFLD  QLQ NP F+
Subjt:  SPQMFAPRPDF-PNLLQFSQMIPPFSNPNPYPTLSQLLAIKLNDHNFLLNWKNQLLNVVLTNGLEWILYGTVPPPLKFLDLQQLQHNPDFL

RVX22862.1 hypothetical protein CK203_008411 [Vitis vinifera]2.8e-0646.43Show/hide
Query:  SPQMFAPRPDF-PNLLQFSQMIPPFSNPNPYPTLSQLLAIKLNDHNFLLNWKNQLLNVVLTNGLEWILYGTVPPPLKFLDLQQL
        +PQ   P P F PN+ Q +           YP+LSQ L IKL++ N  L WKNQL+NV++ NGLE  + G  P P KFLD  QL
Subjt:  SPQMFAPRPDF-PNLLQFSQMIPPFSNPNPYPTLSQLLAIKLNDHNFLLNWKNQLLNVVLTNGLEWILYGTVPPPLKFLDLQQL

XP_022155181.1 uncharacterized protein LOC111022315 [Momordica charantia]7.7e-1258.02Show/hide
Query:  PDFPNLLQFSQMIPPFSNPNPYPTLSQLLAIKLNDHNFLLNWKNQLLNVVLTNGLEWILYGTVPPPLKFLDLQQLQHNPDF
        P  PN L  +Q   PFS  NP+PTL Q L +KLND+NFLL WKNQLLN V+ NGL   L GT+ PP +FLD  QLQ NP +
Subjt:  PDFPNLLQFSQMIPPFSNPNPYPTLSQLLAIKLNDHNFLLNWKNQLLNVVLTNGLEWILYGTVPPPLKFLDLQQLQHNPDF

TrEMBL top hitse value%identityAlignment
A0A438F8X3 Retrovirus-related Pol polyprotein from transposon RE12.9e-0948.35Show/hide
Query:  SPQMFAPRPDF-PNLLQFSQMIPPFSNPNPYPTLSQLLAIKLNDHNFLLNWKNQLLNVVLTNGLEWILYGTVPPPLKFLDLQQLQHNPDFL
        +PQ   P P F PN+ Q +           YP+LSQ L IKL++ N  L WKNQLLNV++ NGLE  + G  P P KFLD  QLQ NP F+
Subjt:  SPQMFAPRPDF-PNLLQFSQMIPPFSNPNPYPTLSQLLAIKLNDHNFLLNWKNQLLNVVLTNGLEWILYGTVPPPLKFLDLQQLQHNPDFL

A0A438KNU0 Uncharacterized protein1.4e-0646.43Show/hide
Query:  SPQMFAPRPDF-PNLLQFSQMIPPFSNPNPYPTLSQLLAIKLNDHNFLLNWKNQLLNVVLTNGLEWILYGTVPPPLKFLDLQQL
        +PQ   P P F PN+ Q +           YP+LSQ L IKL++ N  L WKNQL+NV++ NGLE  + G  P P KFLD  QL
Subjt:  SPQMFAPRPDF-PNLLQFSQMIPPFSNPNPYPTLSQLLAIKLNDHNFLLNWKNQLLNVVLTNGLEWILYGTVPPPLKFLDLQQL

A0A6J1DQX7 uncharacterized protein LOC1110223153.7e-1258.02Show/hide
Query:  PDFPNLLQFSQMIPPFSNPNPYPTLSQLLAIKLNDHNFLLNWKNQLLNVVLTNGLEWILYGTVPPPLKFLDLQQLQHNPDF
        P  PN L  +Q   PFS  NP+PTL Q L +KLND+NFLL WKNQLLN V+ NGL   L GT+ PP +FLD  QLQ NP +
Subjt:  PDFPNLLQFSQMIPPFSNPNPYPTLSQLLAIKLNDHNFLLNWKNQLLNVVLTNGLEWILYGTVPPPLKFLDLQQLQHNPDF

A0A7J0EGI5 Uncharacterized protein1.1e-0846.81Show/hide
Query:  APRPDFPNLLQFSQMIPPFSNPNP----------YPTLSQLLAIKLNDHNFLLNWKNQLLNVVLTNGLEWILYGTVPPPLKFLDLQQLQHNPDF
        AP P   N L  S  IP   NPNP           P+++Q LA+KL+DHN+++ WK QLLN+V+ NGLE  L G+   P +FLD QQ Q NP+F
Subjt:  APRPDFPNLLQFSQMIPPFSNPNP----------YPTLSQLLAIKLNDHNFLLNWKNQLLNVVLTNGLEWILYGTVPPPLKFLDLQQLQHNPDF

A0A7J0GPN0 UBX domain-containing protein4.2e-0845.56Show/hide
Query:  APRPDFPNLLQFSQM---IPPFSNPNP---YPTLSQLLAIKLNDHNFLLNWKNQLLNVVLTNGLEWILYGTVPPPLKFLDLQQLQHNPDF
        AP P   N L  S +    P   N +P    P+++Q LA+KL+DHN+++ WK QLLN+V+ NGLE  L G+   P +FLD QQ Q NP+F
Subjt:  APRPDFPNLLQFSQM---IPPFSNPNP---YPTLSQLLAIKLNDHNFLLNWKNQLLNVVLTNGLEWILYGTVPPPLKFLDLQQLQHNPDF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCAGGTGAAGGCTTGTTGTCTTCATCTGACGAAATTCTTATTACTCTGGTAGTCTCTTCACCTTCAACTGAGACGGTTAAAATACCCAATCGGCCTTTTCCAAT
TCAAACGACTATCTCTACCCTAGTTTATCGACCGCATGATGTCCGCTCACCTCAGATGTTTGCTCCACGCCCGGACTTTCCCAATCTCCTACAATTCTCCCAAATGATAC
CTCCATTCTCTAATCCAAATCCCTACCCTACTTTGTCCCAACTGCTTGCTATCAAGCTAAATGATCATAACTTCCTTCTGAATTGGAAGAATCAACTCTTGAATGTTGTT
CTTACGAATGGGCTCGAATGGATACTCTATGGTACTGTGCCTCCTCCTCTAAAATTCTTGGATCTACAACAGTTGCAACATAATCCTGATTTTCTGGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCAGGTGAAGGCTTGTTGTCTTCATCTGACGAAATTCTTATTACTCTGGTAGTCTCTTCACCTTCAACTGAGACGGTTAAAATACCCAATCGGCCTTTTCCAAT
TCAAACGACTATCTCTACCCTAGTTTATCGACCGCATGATGTCCGCTCACCTCAGATGTTTGCTCCACGCCCGGACTTTCCCAATCTCCTACAATTCTCCCAAATGATAC
CTCCATTCTCTAATCCAAATCCCTACCCTACTTTGTCCCAACTGCTTGCTATCAAGCTAAATGATCATAACTTCCTTCTGAATTGGAAGAATCAACTCTTGAATGTTGTT
CTTACGAATGGGCTCGAATGGATACTCTATGGTACTGTGCCTCCTCCTCTAAAATTCTTGGATCTACAACAGTTGCAACATAATCCTGATTTTCTGGTATGA
Protein sequenceShow/hide protein sequence
MAAGEGLLSSSDEILITLVVSSPSTETVKIPNRPFPIQTTISTLVYRPHDVRSPQMFAPRPDFPNLLQFSQMIPPFSNPNPYPTLSQLLAIKLNDHNFLLNWKNQLLNVV
LTNGLEWILYGTVPPPLKFLDLQQLQHNPDFLV