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PI0016707 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016707
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr03:20632330..20632713
RNA-Seq ExpressionPI0016707
SyntenyPI0016707
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAO73521.1 gag-pol polyprotein [Glycine max]3.8e-3962.79Show/hide
Query:  METISEGGSTTRPPVLDGSNYVYWKARMTAFLKSVDSKTWMPIIVGWTHPIITDEEG--VESLKPEKDWTDTEDEVALGNSCALNAIFNGVDQNTFKLIN
        M    EGG   RPP+LDGSNY YWKARM AFLKS+DS+TW  +I GW HP + D EG   + LKPE+DWT  EDE+ALGNS ALNA+FNGVD+N F+LIN
Subjt:  METISEGGSTTRPPVLDGSNYVYWKARMTAFLKSVDSKTWMPIIVGWTHPIITDEEG--VESLKPEKDWTDTEDEVALGNSCALNAIFNGVDQNTFKLIN

Query:  TRISTADAWKILEVAHEETSKVKMSPLQI
        T     DAW+IL++ HE TSKVK+S LQ+
Subjt:  TRISTADAWKILEVAHEETSKVKMSPLQI

AAO73527.1 gag-pol polyprotein [Glycine max]1.3e-3963.57Show/hide
Query:  METISEGGSTTRPPVLDGSNYVYWKARMTAFLKSVDSKTWMPIIVGWTHPIITDEEG--VESLKPEKDWTDTEDEVALGNSCALNAIFNGVDQNTFKLIN
        M    EGG   RPP+LDGSNY YWKARM AFLKS+DS+TW  +I GW HP + D EG   + LKPE+DWT  EDE+ALGNS ALNA+FNGVD+N F+LIN
Subjt:  METISEGGSTTRPPVLDGSNYVYWKARMTAFLKSVDSKTWMPIIVGWTHPIITDEEG--VESLKPEKDWTDTEDEVALGNSCALNAIFNGVDQNTFKLIN

Query:  TRISTADAWKILEVAHEETSKVKMSPLQI
        T     DAW+IL++ HE TSKVKMS LQ+
Subjt:  TRISTADAWKILEVAHEETSKVKMSPLQI

AAO73529.1 gag-pol polyprotein [Glycine max]1.1e-3862.79Show/hide
Query:  METISEGGSTTRPPVLDGSNYVYWKARMTAFLKSVDSKTWMPIIVGWTHPIITDEEG--VESLKPEKDWTDTEDEVALGNSCALNAIFNGVDQNTFKLIN
        M    EGG   RPP+LDG+NY YWKARM AFLKS+DS+TW  +I GW HP + D EG     LKPE+DWT  EDE+ALGNS ALNA+FNGVD+N F+LIN
Subjt:  METISEGGSTTRPPVLDGSNYVYWKARMTAFLKSVDSKTWMPIIVGWTHPIITDEEG--VESLKPEKDWTDTEDEVALGNSCALNAIFNGVDQNTFKLIN

Query:  TRISTADAWKILEVAHEETSKVKMSPLQI
        T     DAW+IL+  HE TSKVKMS LQ+
Subjt:  TRISTADAWKILEVAHEETSKVKMSPLQI

NP_001235160.1 gag-protease polyprotein [Glycine max]4.2e-3862.02Show/hide
Query:  METISEGGSTTRPPVLDGSNYVYWKARMTAFLKSVDSKTWMPIIVGWTHPIITDEEG--VESLKPEKDWTDTEDEVALGNSCALNAIFNGVDQNTFKLIN
        M    EGG   RPP+LDG+NY YWKARM AFLKS+DS+TW  +I  W HP + D EG   + LKPE+DWT  EDE+ALGNS ALNA+FNGVD+N F+LIN
Subjt:  METISEGGSTTRPPVLDGSNYVYWKARMTAFLKSVDSKTWMPIIVGWTHPIITDEEG--VESLKPEKDWTDTEDEVALGNSCALNAIFNGVDQNTFKLIN

Query:  TRISTADAWKILEVAHEETSKVKMSPLQI
        T     DAW+IL+  HE TSKVKMS LQ+
Subjt:  TRISTADAWKILEVAHEETSKVKMSPLQI

NRJ45860.1 hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi]1.1e-3862.79Show/hide
Query:  METISEGGSTTRPPVLDGSNYVYWKARMTAFLKSVDSKTWMPIIVGWTHPIITDEEG--VESLKPEKDWTDTEDEVALGNSCALNAIFNGVDQNTFKLIN
        M    EGG   RPP+LDG NY YWKARM AFLKS+DS+TW  +I GW HP + D EG   + LKPE+DWT  EDE+ALGNS ALNA+FNGVD+N F+LIN
Subjt:  METISEGGSTTRPPVLDGSNYVYWKARMTAFLKSVDSKTWMPIIVGWTHPIITDEEG--VESLKPEKDWTDTEDEVALGNSCALNAIFNGVDQNTFKLIN

Query:  TRISTADAWKILEVAHEETSKVKMSPLQI
        T     DAW+IL+  HE TSKVKMS LQ+
Subjt:  TRISTADAWKILEVAHEETSKVKMSPLQI

TrEMBL top hitse value%identityAlignment
Q84VH6 Gag-pol polyprotein5.4e-3962.79Show/hide
Query:  METISEGGSTTRPPVLDGSNYVYWKARMTAFLKSVDSKTWMPIIVGWTHPIITDEEG--VESLKPEKDWTDTEDEVALGNSCALNAIFNGVDQNTFKLIN
        M    EGG   RPP+LDG+NY YWKARM AFLKS+DS+TW  +I GW HP + D EG     LKPE+DWT  EDE+ALGNS ALNA+FNGVD+N F+LIN
Subjt:  METISEGGSTTRPPVLDGSNYVYWKARMTAFLKSVDSKTWMPIIVGWTHPIITDEEG--VESLKPEKDWTDTEDEVALGNSCALNAIFNGVDQNTFKLIN

Query:  TRISTADAWKILEVAHEETSKVKMSPLQI
        T     DAW+IL+  HE TSKVKMS LQ+
Subjt:  TRISTADAWKILEVAHEETSKVKMSPLQI

Q84VH8 Gag-pol polyprotein6.4e-4063.57Show/hide
Query:  METISEGGSTTRPPVLDGSNYVYWKARMTAFLKSVDSKTWMPIIVGWTHPIITDEEG--VESLKPEKDWTDTEDEVALGNSCALNAIFNGVDQNTFKLIN
        M    EGG   RPP+LDGSNY YWKARM AFLKS+DS+TW  +I GW HP + D EG   + LKPE+DWT  EDE+ALGNS ALNA+FNGVD+N F+LIN
Subjt:  METISEGGSTTRPPVLDGSNYVYWKARMTAFLKSVDSKTWMPIIVGWTHPIITDEEG--VESLKPEKDWTDTEDEVALGNSCALNAIFNGVDQNTFKLIN

Query:  TRISTADAWKILEVAHEETSKVKMSPLQI
        T     DAW+IL++ HE TSKVKMS LQ+
Subjt:  TRISTADAWKILEVAHEETSKVKMSPLQI

Q84VI2 Gag-pol polyprotein7.8e-3862.79Show/hide
Query:  METISEGGSTTRPPVLDGSNYVYWKARMTAFLKSVDSKTWMPIIVGWTHPIITDEEG--VESLKPEKDWTDTEDEVALGNSCALNAIFNGVDQNTFKLIN
        M    EGG   RPP+LDGSNY YWKARM AFLKS+DS+TW  +I GW HP + D EG   + LKPE+DWT  EDE+ALGNS ALNA+FNGVD+N F+LIN
Subjt:  METISEGGSTTRPPVLDGSNYVYWKARMTAFLKSVDSKTWMPIIVGWTHPIITDEEG--VESLKPEKDWTDTEDEVALGNSCALNAIFNGVDQNTFKLIN

Query:  TRISTADAWKILEVAHEETSKVKMSPLQI
        T     DA +IL+  HE TSKVKMS LQ+
Subjt:  TRISTADAWKILEVAHEETSKVKMSPLQI

Q84VI4 Gag-pol polyprotein1.9e-3962.79Show/hide
Query:  METISEGGSTTRPPVLDGSNYVYWKARMTAFLKSVDSKTWMPIIVGWTHPIITDEEG--VESLKPEKDWTDTEDEVALGNSCALNAIFNGVDQNTFKLIN
        M    EGG   RPP+LDGSNY YWKARM AFLKS+DS+TW  +I GW HP + D EG   + LKPE+DWT  EDE+ALGNS ALNA+FNGVD+N F+LIN
Subjt:  METISEGGSTTRPPVLDGSNYVYWKARMTAFLKSVDSKTWMPIIVGWTHPIITDEEG--VESLKPEKDWTDTEDEVALGNSCALNAIFNGVDQNTFKLIN

Query:  TRISTADAWKILEVAHEETSKVKMSPLQI
        T     DAW+IL++ HE TSKVK+S LQ+
Subjt:  TRISTADAWKILEVAHEETSKVKMSPLQI

V9H042 Gag-protease polyprotein2.0e-3862.02Show/hide
Query:  METISEGGSTTRPPVLDGSNYVYWKARMTAFLKSVDSKTWMPIIVGWTHPIITDEEG--VESLKPEKDWTDTEDEVALGNSCALNAIFNGVDQNTFKLIN
        M    EGG   RPP+LDG+NY YWKARM AFLKS+DS+TW  +I  W HP + D EG   + LKPE+DWT  EDE+ALGNS ALNA+FNGVD+N F+LIN
Subjt:  METISEGGSTTRPPVLDGSNYVYWKARMTAFLKSVDSKTWMPIIVGWTHPIITDEEG--VESLKPEKDWTDTEDEVALGNSCALNAIFNGVDQNTFKLIN

Query:  TRISTADAWKILEVAHEETSKVKMSPLQI
        T     DAW+IL+  HE TSKVKMS LQ+
Subjt:  TRISTADAWKILEVAHEETSKVKMSPLQI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACAATCAGCGAAGGAGGATCAACCACTCGGCCTCCTGTTCTAGATGGATCCAATTATGTCTATTGGAAGGCAAGAATGACCGCCTTTCTCAAATCTGTTGACAG
CAAGACCTGGATGCCTATTATCGTTGGATGGACTCATCCAATTATCACTGATGAAGAAGGGGTTGAGTCTCTCAAACCTGAAAAAGATTGGACTGACACAGAAGATGAAG
TTGCTCTTGGGAATTCTTGTGCGTTGAATGCTATTTTCAATGGGGTTGATCAGAATACATTCAAACTTATCAACACCCGTATTTCTACTGCTGATGCTTGGAAAATATTA
GAAGTTGCTCATGAAGAGACTTCTAAGGTTAAAATGTCTCCACTTCAAATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGACAATCAGCGAAGGAGGATCAACCACTCGGCCTCCTGTTCTAGATGGATCCAATTATGTCTATTGGAAGGCAAGAATGACCGCCTTTCTCAAATCTGTTGACAG
CAAGACCTGGATGCCTATTATCGTTGGATGGACTCATCCAATTATCACTGATGAAGAAGGGGTTGAGTCTCTCAAACCTGAAAAAGATTGGACTGACACAGAAGATGAAG
TTGCTCTTGGGAATTCTTGTGCGTTGAATGCTATTTTCAATGGGGTTGATCAGAATACATTCAAACTTATCAACACCCGTATTTCTACTGCTGATGCTTGGAAAATATTA
GAAGTTGCTCATGAAGAGACTTCTAAGGTTAAAATGTCTCCACTTCAAATCTAA
Protein sequenceShow/hide protein sequence
METISEGGSTTRPPVLDGSNYVYWKARMTAFLKSVDSKTWMPIIVGWTHPIITDEEGVESLKPEKDWTDTEDEVALGNSCALNAIFNGVDQNTFKLINTRISTADAWKIL
EVAHEETSKVKMSPLQI