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PI0016719 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016719
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr09:15120051..15120332
RNA-Seq ExpressionPI0016719
SyntenyPI0016719
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006413 - translational initiation (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032583.1 reverse transcriptase [Cucumis melo var. makuwa]1.2e-3483.52Show/hide
Query:  MGALKFLLSLQKKVGETSGSIERGLMYVDTWINQKPTKSTMVDSGATHNFITETEARRLSLHWEKDTEKMKAVNSTALPIVGVVKRTMIRL
        MGALKFL SLQKKVGET+  +ERGLMYVDTWINQKPTKSTMVDSGATHNFITE EA+RL+L WEKD  +MKAVNS ALPI+G+VKRTMIRL
Subjt:  MGALKFLLSLQKKVGETSGSIERGLMYVDTWINQKPTKSTMVDSGATHNFITETEARRLSLHWEKDTEKMKAVNSTALPIVGVVKRTMIRL

KAA0037573.1 reverse transcriptase [Cucumis melo var. makuwa]3.2e-3584.62Show/hide
Query:  MGALKFLLSLQKKVGETSGSIERGLMYVDTWINQKPTKSTMVDSGATHNFITETEARRLSLHWEKDTEKMKAVNSTALPIVGVVKRTMIRL
        MGALKFL SLQKKVGET+  +ERGLMYVDTWINQKPTKSTMVDSGATHNFITE EA+RL+L WEKD E+MKAVNS ALPI+G+VKRTMIRL
Subjt:  MGALKFLLSLQKKVGETSGSIERGLMYVDTWINQKPTKSTMVDSGATHNFITETEARRLSLHWEKDTEKMKAVNSTALPIVGVVKRTMIRL

KAA0045217.1 uncharacterized protein E6C27_scaffold30G002260 [Cucumis melo var. makuwa]1.2e-3483.52Show/hide
Query:  MGALKFLLSLQKKVGETSGSIERGLMYVDTWINQKPTKSTMVDSGATHNFITETEARRLSLHWEKDTEKMKAVNSTALPIVGVVKRTMIRL
        MGALKFL SLQKKVGET+  +ERGLMYVDTWINQKPTKSTMVDSGATHNFITE EA+RL+L WEKD  +MKAVNS ALPI+G+VKRTMIRL
Subjt:  MGALKFLLSLQKKVGETSGSIERGLMYVDTWINQKPTKSTMVDSGATHNFITETEARRLSLHWEKDTEKMKAVNSTALPIVGVVKRTMIRL

KAA0066677.1 uncharacterized protein E6C27_scaffold271G00020 [Cucumis melo var. makuwa]4.2e-3583.7Show/hide
Query:  MGALKFLLSLQKKVGETSGSIERGLMYVDTWINQKPTKSTMVDSGATHNFITETEARRLSLHWEKDTEKMKAVNSTALPIVGVVKRTMIRLE
        MGALKFL SLQKKVGET+ S+ERGLMYVDTW NQKPTKSTMVDSGATHNFITE EA+RL+L WEKD  +MKAVNS ALPI+G+VKRTMIRLE
Subjt:  MGALKFLLSLQKKVGETSGSIERGLMYVDTWINQKPTKSTMVDSGATHNFITETEARRLSLHWEKDTEKMKAVNSTALPIVGVVKRTMIRLE

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]2.1e-3483.52Show/hide
Query:  MGALKFLLSLQKKVGETSGSIERGLMYVDTWINQKPTKSTMVDSGATHNFITETEARRLSLHWEKDTEKMKAVNSTALPIVGVVKRTMIRL
        MGALKFL SLQKKVGET+  +ERGLMYVDTWINQKPTKSTMVDSGATHNFITE EA+RL+L WEKD  +MKAVNS ALPI+G+VKRTMIRL
Subjt:  MGALKFLLSLQKKVGETSGSIERGLMYVDTWINQKPTKSTMVDSGATHNFITETEARRLSLHWEKDTEKMKAVNSTALPIVGVVKRTMIRL

TrEMBL top hitse value%identityAlignment
A0A5A7SQC7 Reverse transcriptase5.9e-3583.52Show/hide
Query:  MGALKFLLSLQKKVGETSGSIERGLMYVDTWINQKPTKSTMVDSGATHNFITETEARRLSLHWEKDTEKMKAVNSTALPIVGVVKRTMIRL
        MGALKFL SLQKKVGET+  +ERGLMYVDTWINQKPTKSTMVDSGATHNFITE EA+RL+L WEKD  +MKAVNS ALPI+G+VKRTMIRL
Subjt:  MGALKFLLSLQKKVGETSGSIERGLMYVDTWINQKPTKSTMVDSGATHNFITETEARRLSLHWEKDTEKMKAVNSTALPIVGVVKRTMIRL

A0A5A7T3M3 Reverse transcriptase1.6e-3584.62Show/hide
Query:  MGALKFLLSLQKKVGETSGSIERGLMYVDTWINQKPTKSTMVDSGATHNFITETEARRLSLHWEKDTEKMKAVNSTALPIVGVVKRTMIRL
        MGALKFL SLQKKVGET+  +ERGLMYVDTWINQKPTKSTMVDSGATHNFITE EA+RL+L WEKD E+MKAVNS ALPI+G+VKRTMIRL
Subjt:  MGALKFLLSLQKKVGETSGSIERGLMYVDTWINQKPTKSTMVDSGATHNFITETEARRLSLHWEKDTEKMKAVNSTALPIVGVVKRTMIRL

A0A5A7TTJ4 Reverse transcriptase domain-containing protein5.9e-3583.52Show/hide
Query:  MGALKFLLSLQKKVGETSGSIERGLMYVDTWINQKPTKSTMVDSGATHNFITETEARRLSLHWEKDTEKMKAVNSTALPIVGVVKRTMIRL
        MGALKFL SLQKKVGET+  +ERGLMYVDTWINQKPTKSTMVDSGATHNFITE EA+RL+L WEKD  +MKAVNS ALPI+G+VKRTMIRL
Subjt:  MGALKFLLSLQKKVGETSGSIERGLMYVDTWINQKPTKSTMVDSGATHNFITETEARRLSLHWEKDTEKMKAVNSTALPIVGVVKRTMIRL

A0A5A7VHT2 Reverse transcriptase domain-containing protein2.0e-3583.7Show/hide
Query:  MGALKFLLSLQKKVGETSGSIERGLMYVDTWINQKPTKSTMVDSGATHNFITETEARRLSLHWEKDTEKMKAVNSTALPIVGVVKRTMIRLE
        MGALKFL SLQKKVGET+ S+ERGLMYVDTW NQKPTKSTMVDSGATHNFITE EA+RL+L WEKD  +MKAVNS ALPI+G+VKRTMIRLE
Subjt:  MGALKFLLSLQKKVGETSGSIERGLMYVDTWINQKPTKSTMVDSGATHNFITETEARRLSLHWEKDTEKMKAVNSTALPIVGVVKRTMIRLE

A0A5D3C4R1 Reverse transcriptase1.0e-3483.52Show/hide
Query:  MGALKFLLSLQKKVGETSGSIERGLMYVDTWINQKPTKSTMVDSGATHNFITETEARRLSLHWEKDTEKMKAVNSTALPIVGVVKRTMIRL
        MGALKFL SLQKKVGET+  +ERGLMYVDTWINQKPTKSTMVDSGATHNFITE EA+RL+L WEKD  +MKAVNS ALPI+G+VKRTMIRL
Subjt:  MGALKFLLSLQKKVGETSGSIERGLMYVDTWINQKPTKSTMVDSGATHNFITETEARRLSLHWEKDTEKMKAVNSTALPIVGVVKRTMIRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCCTTGAAATTTCTATTGTCTCTCCAAAAGAAGGTGGGAGAGACAAGTGGATCAATAGAAAGGGGTCTAATGTACGTCGACACTTGGATCAACCAGAAGCCAAC
TAAGAGTACCATGGTCGACTCTGGTGCGACTCACAACTTTATTACCGAGACAGAAGCCCGACGATTAAGTCTCCACTGGGAGAAAGACACGGAAAAGATGAAGGCCGTAA
ACTCTACTGCCCTACCTATCGTCGGAGTTGTAAAAAGAACAATGATAAGGTTGGAAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCCTTGAAATTTCTATTGTCTCTCCAAAAGAAGGTGGGAGAGACAAGTGGATCAATAGAAAGGGGTCTAATGTACGTCGACACTTGGATCAACCAGAAGCCAAC
TAAGAGTACCATGGTCGACTCTGGTGCGACTCACAACTTTATTACCGAGACAGAAGCCCGACGATTAAGTCTCCACTGGGAGAAAGACACGGAAAAGATGAAGGCCGTAA
ACTCTACTGCCCTACCTATCGTCGGAGTTGTAAAAAGAACAATGATAAGGTTGGAAAGATAG
Protein sequenceShow/hide protein sequence
MGALKFLLSLQKKVGETSGSIERGLMYVDTWINQKPTKSTMVDSGATHNFITETEARRLSLHWEKDTEKMKAVNSTALPIVGVVKRTMIRLER