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PI0016740 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016740
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr06:16627159..16627404
RNA-Seq ExpressionPI0016740
SyntenyPI0016740
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0008233 - peptidase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031678.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-2376.25Show/hide
Query:  EFANDQLKTIADWPKEKRATEVKLRAEVVKQLQDILELRSRERVKLMRIILRSVDNIKGFLLIPIELKLEYCNILLEENV
        EF NDQLKTI DWPKEKRATEV+LR EVVKQLQDI +LRS++R KLM+I+ RSV+ I+GFL IP +LKLEYCNILLE NV
Subjt:  EFANDQLKTIADWPKEKRATEVKLRAEVVKQLQDILELRSRERVKLMRIILRSVDNIKGFLLIPIELKLEYCNILLEENV

KAA0040620.1 retrotransposon protein [Cucumis melo var. makuwa]9.3e-2375.31Show/hide
Query:  MEFANDQLKTIADWPKEKRATEVKLRAEVVKQLQDILELRSRERVKLMRIILRSVDNIKGFLLIPIELKLEYCNILLEENV
        +E ANDQLK IA WPK+KRATEV+LRA+VVKQLQDI ELRSR RVKLM+II  SVD I+GFLL P +LKLEYCN+LLE+N+
Subjt:  MEFANDQLKTIADWPKEKRATEVKLRAEVVKQLQDILELRSRERVKLMRIILRSVDNIKGFLLIPIELKLEYCNILLEENV

KAA0063430.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.2e-2374.07Show/hide
Query:  MEFANDQLKTIADWPKEKRATEVKLRAEVVKQLQDILELRSRERVKLMRIILRSVDNIKGFLLIPIELKLEYCNILLEENV
        MEF NDQLK IA+WPKEKRATEV+L  EVVKQLQDI EL+S++R KLM+I+ RSV+ I+GFL IP+ELKLEYCNILL+ NV
Subjt:  MEFANDQLKTIADWPKEKRATEVKLRAEVVKQLQDILELRSRERVKLMRIILRSVDNIKGFLLIPIELKLEYCNILLEENV

KAA0065769.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.5e-2274.07Show/hide
Query:  MEFANDQLKTIADWPKEKRATEVKLRAEVVKQLQDILELRSRERVKLMRIILRSVDNIKGFLLIPIELKLEYCNILLEENV
        MEF NDQLK IADW KEKRATEV+L A VVKQLQDI +LRSR+R KLM+I+ RSV+ I GFL IP +LKLEYCN+LLE NV
Subjt:  MEFANDQLKTIADWPKEKRATEVKLRAEVVKQLQDILELRSRERVKLMRIILRSVDNIKGFLLIPIELKLEYCNILLEENV

KAA0066604.1 retrotransposon protein [Cucumis melo var. makuwa]2.5e-2378.21Show/hide
Query:  MEFANDQLKTIADWPKEKRATEVKLRAEVVKQLQDILELRSRERVKLMRIILRSVDNIKGFLLIPIELKLEYCNILLE
        MEF NDQLKTIA+WPKEKR TEV+LRAEVVKQLQ+ILEL SR+R KLM+I+  SV+ I+GFL IPIELKLEYCNILL+
Subjt:  MEFANDQLKTIADWPKEKRATEVKLRAEVVKQLQDILELRSRERVKLMRIILRSVDNIKGFLLIPIELKLEYCNILLE

TrEMBL top hitse value%identityAlignment
A0A5A7V8C5 Putative nuclease HARBI11.6e-2374.07Show/hide
Query:  MEFANDQLKTIADWPKEKRATEVKLRAEVVKQLQDILELRSRERVKLMRIILRSVDNIKGFLLIPIELKLEYCNILLEENV
        MEF NDQLK IA+WPKEKRATEV+L  EVVKQLQDI EL+S++R KLM+I+ RSV+ I+GFL IP+ELKLEYCNILL+ NV
Subjt:  MEFANDQLKTIADWPKEKRATEVKLRAEVVKQLQDILELRSRERVKLMRIILRSVDNIKGFLLIPIELKLEYCNILLEENV

A0A5D3BBW3 Putative nuclease HARBI11.7e-2274.07Show/hide
Query:  MEFANDQLKTIADWPKEKRATEVKLRAEVVKQLQDILELRSRERVKLMRIILRSVDNIKGFLLIPIELKLEYCNILLEENV
        MEF NDQLK IADW KEKRATEV+L A VVKQLQDI +LRSR+R KLM+I+ RSV+ I GFL IP +LKLEYCN+LLE NV
Subjt:  MEFANDQLKTIADWPKEKRATEVKLRAEVVKQLQDILELRSRERVKLMRIILRSVDNIKGFLLIPIELKLEYCNILLEENV

A0A5D3BZU3 Retrotransposon protein5.3e-2476.25Show/hide
Query:  EFANDQLKTIADWPKEKRATEVKLRAEVVKQLQDILELRSRERVKLMRIILRSVDNIKGFLLIPIELKLEYCNILLEENV
        EF NDQLKTI DWPKEKRATEV+LR EVVKQLQDI +LRS++R KLM+I+ RSV+ I+GFL IP +LKLEYCNILLE NV
Subjt:  EFANDQLKTIADWPKEKRATEVKLRAEVVKQLQDILELRSRERVKLMRIILRSVDNIKGFLLIPIELKLEYCNILLEENV

A0A5D3C1H4 Retrotransposon protein4.5e-2375.31Show/hide
Query:  MEFANDQLKTIADWPKEKRATEVKLRAEVVKQLQDILELRSRERVKLMRIILRSVDNIKGFLLIPIELKLEYCNILLEENV
        +E ANDQLK IA WPK+KRATEV+LRA+VVKQLQDI ELRSR RVKLM+II  SVD I+GFLL P +LKLEYCN+LLE+N+
Subjt:  MEFANDQLKTIADWPKEKRATEVKLRAEVVKQLQDILELRSRERVKLMRIILRSVDNIKGFLLIPIELKLEYCNILLEENV

A0A5D3CT52 Retrotransposon protein1.2e-2378.21Show/hide
Query:  MEFANDQLKTIADWPKEKRATEVKLRAEVVKQLQDILELRSRERVKLMRIILRSVDNIKGFLLIPIELKLEYCNILLE
        MEF NDQLKTIA+WPKEKR TEV+LRAEVVKQLQ+ILEL SR+R KLM+I+  SV+ I+GFL IPIELKLEYCNILL+
Subjt:  MEFANDQLKTIADWPKEKRATEVKLRAEVVKQLQDILELRSRERVKLMRIILRSVDNIKGFLLIPIELKLEYCNILLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTTGCAAATGATCAATTAAAGACAATTGCAGATTGGCCAAAAGAAAAACGTGCAACAGAGGTCAAATTGCGTGCTGAAGTCGTGAAACAACTGCAAGATATCCT
TGAATTACGAAGTCGGGAGAGGGTAAAGCTTATGCGAATCATACTTCGTAGTGTGGATAACATAAAGGGATTCTTGCTGATTCCAATAGAACTTAAATTGGAGTATTGCA
ATATTCTTTTGGAAGAAAATGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTTGCAAATGATCAATTAAAGACAATTGCAGATTGGCCAAAAGAAAAACGTGCAACAGAGGTCAAATTGCGTGCTGAAGTCGTGAAACAACTGCAAGATATCCT
TGAATTACGAAGTCGGGAGAGGGTAAAGCTTATGCGAATCATACTTCGTAGTGTGGATAACATAAAGGGATTCTTGCTGATTCCAATAGAACTTAAATTGGAGTATTGCA
ATATTCTTTTGGAAGAAAATGTTTGA
Protein sequenceShow/hide protein sequence
MEFANDQLKTIADWPKEKRATEVKLRAEVVKQLQDILELRSRERVKLMRIILRSVDNIKGFLLIPIELKLEYCNILLEENV