; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0016836 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016836
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRGG repeats nuclear RNA binding protein A-like
Genome locationchr11:2081046..2086141
RNA-Seq ExpressionPI0016836
SyntenyPI0016836
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR006861 - Hyaluronan/mRNA-binding protein
IPR019084 - Stm1-like, N-terminal
IPR039764 - RNA binding protein HABP4/SERBP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011066.1 RGG repeats nuclear RNA binding protein B [Cucurbita argyrosperma subsp. argyrosperma]7.6e-8781.03Show/hide
Query:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGF
        MATTNPFDLLGDDDAEDPSQL+A K AAAV  +KGSDHPQ K QAAAAAK +KPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGG GYGRGRGSGGF
Subjt:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGF

Query:  NRESANNEYSFSSNPEDGETGRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANESQ-K
        NRE   N+YSFSSNPEDGETGRTTEKRGGY GPRGR  RRGGF NG+A+DGER RG FER SGTG GN+FKREGSGRGNWGR TDEF E AEE NE+Q K
Subjt:  NRESANNEYSFSSNPEDGETGRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANESQ-K

Query:  LGDEKPIHEDDTAGVNTENTAKETEEKEPEDK
        +GDEKP+HEDD      EN+A++ EEKEPEDK
Subjt:  LGDEKPIHEDDTAGVNTENTAKETEEKEPEDK

XP_004150996.1 RGG repeats nuclear RNA binding protein A [Cucumis sativus]2.5e-10693.51Show/hide
Query:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGF
        MATTNPFDLLGDDDAEDPSQLMAVKQAAA APKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGR SGR  GGRGYGRGRGSGGF
Subjt:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGF

Query:  NRESANNEYSFSSNPEDGETGRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANESQKL
        NRES NNEYSFSSNPEDGETGRTTEKRGGY GPRGR  RRGGFYNGD ADGERPRG FERHSGTGRGNEFKREGSGRGNWGRS +EFPEVAEEANESQKL
Subjt:  NRESANNEYSFSSNPEDGETGRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANESQKL

Query:  GDEKPIHEDDTAGVNTENTAKETEEKEPEDK
        GDEKP+HEDDTAGVNTEN AKE+EEKEPEDK
Subjt:  GDEKPIHEDDTAGVNTENTAKETEEKEPEDK

XP_008459800.1 PREDICTED: H/ACA ribonucleoprotein complex subunit 1-like [Cucumis melo]2.2e-11095.26Show/hide
Query:  MATTNPFDLLGDDDAEDPSQLMAVKQ-AAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGG
        MATTNPFDLLGDDDAEDPSQLMAVKQ AAAVAPKKGSDHPQAKQQAAAAAKL+KPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGG
Subjt:  MATTNPFDLLGDDDAEDPSQLMAVKQ-AAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGG

Query:  FNRESANNEYSFSSNPEDGETGRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANESQK
        FNRE+ANNEYSFSSNPEDGETGRTTEKRGGY GPRGR  RRGGFYNGD  DGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANESQK
Subjt:  FNRESANNEYSFSSNPEDGETGRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANESQK

Query:  LGDEKPIHEDDTAGVNTENTAKETEEKEPEDK
        LGDEKP+HED TAGVNTENTAKE+EEKEPEDK
Subjt:  LGDEKPIHEDDTAGVNTENTAKETEEKEPEDK

XP_023520986.1 RGG repeats nuclear RNA binding protein A-like [Cucurbita pepo subsp. pepo]1.0e-8681.47Show/hide
Query:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGF
        MATTNPFDLLGDDDAEDPSQL+A K AAAV  +KGSDHPQ K QAAAAAK +KPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGG GYGRGRGSGGF
Subjt:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGF

Query:  NRESANNEYSFSSNPEDGETGRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANESQ-K
        NRE   N+YSFSSNPEDGETGRTTEKRGGY GPRGR  RRGGF NG+A+DGER RG FER SGTG GN+FKREGSGRGNWGRSTDEF   AEE NE Q K
Subjt:  NRESANNEYSFSSNPEDGETGRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANESQ-K

Query:  LGDEKPIHEDDTAGVNTENTAKETEEKEPEDK
        +GDEKP+HEDD      EN+AK+ EEKEPEDK
Subjt:  LGDEKPIHEDDTAGVNTENTAKETEEKEPEDK

XP_038875941.1 RGG repeats nuclear RNA binding protein A-like [Benincasa hispida]1.8e-9987.93Show/hide
Query:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGF
        MATTNPFDLLGDDDAEDPSQL+A K AA  APKKGSDHPQAK QAAAAAKL+KPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYG+GRGSGGF
Subjt:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGF

Query:  NRESANNEYSFSSNPEDGETGRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANESQ-K
        NRESANNEYSFSSNPEDGETGRTTE+RGGY GPRGR  RRGGF NGDA DGE   G+FERHSGTGRGNEFKREGSGRGNWG+ TDEFPEVAE  NES+ K
Subjt:  NRESANNEYSFSSNPEDGETGRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANESQ-K

Query:  LGDEKPIHEDDTAGVNTENTAKETEEKEPEDK
        LGDEKP+HE DTAGVNTEN+AKE+EEKEPEDK
Subjt:  LGDEKPIHEDDTAGVNTENTAKETEEKEPEDK

TrEMBL top hitse value%identityAlignment
A0A0A0KCI2 HABP4_PAI-RBP1 domain-containing protein1.2e-10693.51Show/hide
Query:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGF
        MATTNPFDLLGDDDAEDPSQLMAVKQAAA APKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGR SGR  GGRGYGRGRGSGGF
Subjt:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGF

Query:  NRESANNEYSFSSNPEDGETGRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANESQKL
        NRES NNEYSFSSNPEDGETGRTTEKRGGY GPRGR  RRGGFYNGD ADGERPRG FERHSGTGRGNEFKREGSGRGNWGRS +EFPEVAEEANESQKL
Subjt:  NRESANNEYSFSSNPEDGETGRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANESQKL

Query:  GDEKPIHEDDTAGVNTENTAKETEEKEPEDK
        GDEKP+HEDDTAGVNTEN AKE+EEKEPEDK
Subjt:  GDEKPIHEDDTAGVNTENTAKETEEKEPEDK

A0A1S3CC85 H/ACA ribonucleoprotein complex subunit 1-like1.1e-11095.26Show/hide
Query:  MATTNPFDLLGDDDAEDPSQLMAVKQ-AAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGG
        MATTNPFDLLGDDDAEDPSQLMAVKQ AAAVAPKKGSDHPQAKQQAAAAAKL+KPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGG
Subjt:  MATTNPFDLLGDDDAEDPSQLMAVKQ-AAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGG

Query:  FNRESANNEYSFSSNPEDGETGRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANESQK
        FNRE+ANNEYSFSSNPEDGETGRTTEKRGGY GPRGR  RRGGFYNGD  DGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANESQK
Subjt:  FNRESANNEYSFSSNPEDGETGRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANESQK

Query:  LGDEKPIHEDDTAGVNTENTAKETEEKEPEDK
        LGDEKP+HED TAGVNTENTAKE+EEKEPEDK
Subjt:  LGDEKPIHEDDTAGVNTENTAKETEEKEPEDK

A0A6J1DV55 RGG repeats nuclear RNA binding protein A-like9.1e-8680.69Show/hide
Query:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGF
        MAT NPFDLLGDDDAEDPSQL+A KQ A    KKGSDH  AK QA AA K +KPANLPSKPLPPAQAVREAKN+GGRGGRGS RGGGGRGYGRGR SGGF
Subjt:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGF

Query:  NRESANNEYSFSSNPEDGETGRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEE-ANESQ-
        NR+SA+N+YSFSS PEDGETGRTTE R GY GPRGR  RRGGF NG+ ADGE PRG FERHSGTGRGNEFKREG+GRGNWGR  DEF EVAEE  NE++ 
Subjt:  NRESANNEYSFSSNPEDGETGRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEE-ANESQ-

Query:  KLGDEKPIHEDDTAGVNTENTAKETEEKEPEDK
        K+GDEKP+HEDDTAGVNTEN+AKE+EEKEPEDK
Subjt:  KLGDEKPIHEDDTAGVNTENTAKETEEKEPEDK

A0A6J1EYL0 RGG repeats nuclear RNA binding protein A-like1.6e-8580.17Show/hide
Query:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGF
        MATTNPFDLLGDDDAEDPSQL+A K AA V  +KGSDHPQ K QAAAAAK +KPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGG GYGRGRGSGGF
Subjt:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGF

Query:  NRESANNEYSFSSNPEDGETGRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANESQ-K
        NRE   N+YSFSSNPEDGETGRTTEKRGGY GPRGR  RRGGF NG+A+DGER RG FER S TG GN+FKREGSGRGNWGR TDEF E AEE NE+Q K
Subjt:  NRESANNEYSFSSNPEDGETGRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANESQ-K

Query:  LGDEKPIHEDDTAGVNTENTAKETEEKEPEDK
        +GDEKP+HEDD      E++AK+ EEKEPEDK
Subjt:  LGDEKPIHEDDTAGVNTENTAKETEEKEPEDK

A0A6J1I9V5 RGG repeats nuclear RNA binding protein A-like2.7e-8278.02Show/hide
Query:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGF
        MATTNPFDLLGDDDAEDPSQL+A K AAAV  +K SDHPQ K QAAAAAK +KPANLPSKPLPPAQAVREAKNEGGRGG GSGRGGG  GYG+GR SGGF
Subjt:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGF

Query:  NRESANNEYSFSSNPEDGETGRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANESQ-K
        NRE   N+YSFSSNPEDGETGRTTEKRGGY GPRGR  RRGGF NG+A++GER RG FER SGTG GN+FKREGSGRGNWGR T+EF E AEE NE+Q K
Subjt:  NRESANNEYSFSSNPEDGETGRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANESQ-K

Query:  LGDEKPIHEDDTAGVNTENTAKETEEKEPEDK
        +GDEKP+HEDD      +N+AK+ EEKEPEDK
Subjt:  LGDEKPIHEDDTAGVNTENTAKETEEKEPEDK

SwissProt top hitse value%identityAlignment
O23523 RGG repeats nuclear RNA binding protein A3.0e-3349.39Show/hide
Query:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGF
        MAT NPFDLL DDDAEDPSQL       AVA +K     ++ Q ++  AK S P  LPSKPLPPAQAVREA+++       + RGGGGRG G  RG GG+
Subjt:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGF

Query:  NRESANNEYS--FSSNPEDGETGRTT-EKRGGYSGPRGR---------ASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFP
        NR+  NN YS  ++    +G+  +++ E+RGG   PRG            RRGGF N +  DGERPR  FER SGTGRG++FKR+GSGRGNWG   +E  
Subjt:  NRESANNEYS--FSSNPEDGETGRTT-EKRGGYSGPRGR---------ASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFP

Query:  EVAEEAN--ESQKLGDEKPIHEDDTAGVNTENTAKETEEKEPEDK
           E     E++K   EKP  +D  A  N E+T    EEKEPEDK
Subjt:  EVAEEAN--ESQKLGDEKPIHEDDTAGVNTENTAKETEEKEPEDK

O23593 RGG repeats nuclear RNA binding protein B8.3e-2845.57Show/hide
Query:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGF
        MA+ NPFDLL DDDAEDPSQ++A K    VAP                 + +K   +P+KP PP+QAVREA+N  G GGRG+GRGG    YGRG G GG 
Subjt:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGF

Query:  NRESANNEYSFSSNPEDGETGRTTEKRGG-YSGPRG--RASRRGGFYN-GDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANE
        NR+S NN+   + N   G   R+ E  G    GP G  R  RRG + N GD+ D ERPR  ++RHS T  GNE KR+G+GR NWG + D+   V EE+  
Subjt:  NRESANNEYSFSSNPEDGETGRTTEKRGG-YSGPRG--RASRRGGFYN-GDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANE

Query:  --SQKLGDEKPIHEDDTAGVNTENTAKETEEKEPEDK
           + L  EK   E +      E  A++ EEK PEDK
Subjt:  --SQKLGDEKPIHEDDTAGVNTENTAKETEEKEPEDK

Q9LVT8 RGG repeats nuclear RNA binding protein C8.3e-2844.26Show/hide
Query:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKN--EGGRGGRGSGRGGGGRGYGRGRGSG
        MA+ NPFDLLG DDAEDPSQL     A A++        Q  ++AAAA +  K A  P+KP PP+QAVRE++N  +GGRGG G GRG    G+ RGRG+G
Subjt:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKN--EGGRGGRGSGRGGGGRGYGRGRGSG

Query:  GFNRESANNEYSFSSNPEDGETGRTTEKR---------GGYSGPRGR-ASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFP
        G+NR++ NN+   + N   G   R +E           GGY    GR   RRGG  NG++ D ERP   ++RHS TG G   KR G GRGNWG + D+ P
Subjt:  GFNRESANNEYSFSSNPEDGETGRTTEKR---------GGYSGPRGR-ASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFP

Query:  EVAEEANESQKLGD--EKPIHEDDTAGVNTENTAKETEEKEPED
          +EE     +     EK   ED+T     E TA+E  +KE E+
Subjt:  EVAEEANESQKLGD--EKPIHEDDTAGVNTENTAKETEEKEPED

Q9SQ56 RGG repeats nuclear RNA binding protein A (Fragment)7.6e-2954.39Show/hide
Query:  GGRGSGRGGG-GRGYGRGRGSGGFNRESANNEYSFSSN---------PEDGETGRTTEKRGGYSGPRG--RASRRGGFYNGDAA--DGERPRGVFERHSG
        GGRG  RGGG GRG GRGR   GFN+ESA++E +F SN          EDGE+G+ +E+RGGY GPRG     RRGGF NGDAA  +GERPR VF+R SG
Subjt:  GGRGSGRGGG-GRGYGRGRGSGGFNRESANNEYSFSSN---------PEDGETGRTTEKRGGYSGPRG--RASRRGGFYNGDAA--DGERPRGVFERHSG

Query:  TGRGNEF-KREGSGRGNWGRSTDEFPEVAE-EANESQKLGD-EKPIHEDDTAGVNTENTAKETEEKEPEDK
        TGRGNE+ KREGSGRGNWG   D+  +  E   N+ +K+ + EK   +++    N ++TA E EEKEPE+K
Subjt:  TGRGNEF-KREGSGRGNWGRSTDEFPEVAE-EANESQKLGD-EKPIHEDDTAGVNTENTAKETEEKEPEDK

Arabidopsis top hitse value%identityAlignment
AT4G16830.1 Hyaluronan / mRNA binding family2.1e-3449.39Show/hide
Query:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGF
        MAT NPFDLL DDDAEDPSQL       AVA +K     ++ Q ++  AK S P  LPSKPLPPAQAVREA+++       + RGGGGRG G  RG GG+
Subjt:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGF

Query:  NRESANNEYS--FSSNPEDGETGRTT-EKRGGYSGPRGR---------ASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFP
        NR+  NN YS  ++    +G+  +++ E+RGG   PRG            RRGGF N +  DGERPR  FER SGTGRG++FKR+GSGRGNWG   +E  
Subjt:  NRESANNEYS--FSSNPEDGETGRTT-EKRGGYSGPRGR---------ASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFP

Query:  EVAEEAN--ESQKLGDEKPIHEDDTAGVNTENTAKETEEKEPEDK
           E     E++K   EKP  +D  A  N E+T    EEKEPEDK
Subjt:  EVAEEAN--ESQKLGDEKPIHEDDTAGVNTENTAKETEEKEPEDK

AT4G17520.1 Hyaluronan / mRNA binding family5.9e-2945.57Show/hide
Query:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGF
        MA+ NPFDLL DDDAEDPSQ++A K    VAP                 + +K   +P+KP PP+QAVREA+N  G GGRG+GRGG    YGRG G GG 
Subjt:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGF

Query:  NRESANNEYSFSSNPEDGETGRTTEKRGG-YSGPRG--RASRRGGFYN-GDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANE
        NR+S NN+   + N   G   R+ E  G    GP G  R  RRG + N GD+ D ERPR  ++RHS T  GNE KR+G+GR NWG + D+   V EE+  
Subjt:  NRESANNEYSFSSNPEDGETGRTTEKRGG-YSGPRG--RASRRGGFYN-GDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANE

Query:  --SQKLGDEKPIHEDDTAGVNTENTAKETEEKEPEDK
           + L  EK   E +      E  A++ EEK PEDK
Subjt:  --SQKLGDEKPIHEDDTAGVNTENTAKETEEKEPEDK

AT5G47210.1 Hyaluronan / mRNA binding family5.9e-2944.26Show/hide
Query:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKN--EGGRGGRGSGRGGGGRGYGRGRGSG
        MA+ NPFDLLG DDAEDPSQL     A A++        Q  ++AAAA +  K A  P+KP PP+QAVRE++N  +GGRGG G GRG    G+ RGRG+G
Subjt:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKN--EGGRGGRGSGRGGGGRGYGRGRGSG

Query:  GFNRESANNEYSFSSNPEDGETGRTTEKR---------GGYSGPRGR-ASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFP
        G+NR++ NN+   + N   G   R +E           GGY    GR   RRGG  NG++ D ERP   ++RHS TG G   KR G GRGNWG + D+ P
Subjt:  GFNRESANNEYSFSSNPEDGETGRTTEKR---------GGYSGPRGR-ASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFP

Query:  EVAEEANESQKLGD--EKPIHEDDTAGVNTENTAKETEEKEPED
          +EE     +     EK   ED+T     E TA+E  +KE E+
Subjt:  EVAEEANESQKLGD--EKPIHEDDTAGVNTENTAKETEEKEPED

AT5G47210.2 Hyaluronan / mRNA binding family5.9e-2944.26Show/hide
Query:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKN--EGGRGGRGSGRGGGGRGYGRGRGSG
        MA+ NPFDLLG DDAEDPSQL     A A++        Q  ++AAAA +  K A  P+KP PP+QAVRE++N  +GGRGG G GRG    G+ RGRG+G
Subjt:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKN--EGGRGGRGSGRGGGGRGYGRGRGSG

Query:  GFNRESANNEYSFSSNPEDGETGRTTEKR---------GGYSGPRGR-ASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFP
        G+NR++ NN+   + N   G   R +E           GGY    GR   RRGG  NG++ D ERP   ++RHS TG G   KR G GRGNWG + D+ P
Subjt:  GFNRESANNEYSFSSNPEDGETGRTTEKR---------GGYSGPRGR-ASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFP

Query:  EVAEEANESQKLGD--EKPIHEDDTAGVNTENTAKETEEKEPED
          +EE     +     EK   ED+T     E TA+E  +KE E+
Subjt:  EVAEEANESQKLGD--EKPIHEDDTAGVNTENTAKETEEKEPED

AT5G47210.3 Hyaluronan / mRNA binding family5.9e-2944.26Show/hide
Query:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKN--EGGRGGRGSGRGGGGRGYGRGRGSG
        MA+ NPFDLLG DDAEDPSQL     A A++        Q  ++AAAA +  K A  P+KP PP+QAVRE++N  +GGRGG G GRG    G+ RGRG+G
Subjt:  MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKN--EGGRGGRGSGRGGGGRGYGRGRGSG

Query:  GFNRESANNEYSFSSNPEDGETGRTTEKR---------GGYSGPRGR-ASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFP
        G+NR++ NN+   + N   G   R +E           GGY    GR   RRGG  NG++ D ERP   ++RHS TG G   KR G GRGNWG + D+ P
Subjt:  GFNRESANNEYSFSSNPEDGETGRTTEKR---------GGYSGPRGR-ASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFP

Query:  EVAEEANESQKLGD--EKPIHEDDTAGVNTENTAKETEEKEPED
          +EE     +     EK   ED+T     E TA+E  +KE E+
Subjt:  EVAEEANESQKLGD--EKPIHEDDTAGVNTENTAKETEEKEPED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCACAAATCCATTTGATTTGTTGGGTGATGACGATGCTGAGGACCCATCGCAGCTAATGGCTGTCAAGCAGGCGGCGGCGGTGGCGCCTAAGAAAGGTTCTGA
TCATCCTCAGGCTAAACAACAGGCGGCTGCGGCAGCTAAATTGAGTAAACCTGCTAATCTTCCTTCCAAGCCTCTTCCGCCTGCTCAGGCTGTAAGGGAAGCAAAGAATG
AAGGTGGTCGTGGAGGTCGTGGTAGTGGGCGTGGTGGAGGTGGACGTGGATATGGACGAGGGCGTGGCAGTGGTGGCTTTAATCGTGAGTCTGCAAATAATGAGTACTCA
TTTAGTAGTAACCCTGAAGATGGAGAAACTGGAAGGACAACAGAAAAGCGTGGTGGATATAGTGGACCTCGTGGTCGTGCTAGCCGTCGTGGTGGTTTTTATAATGGAGA
TGCTGCTGATGGTGAACGCCCTCGTGGTGTATTTGAACGGCACAGTGGAACTGGCCGTGGAAATGAATTCAAGCGTGAAGGGTCTGGGCGTGGGAATTGGGGAAGGTCGA
CTGATGAATTTCCTGAGGTTGCTGAGGAAGCTAATGAATCTCAGAAGTTAGGTGATGAGAAGCCCATTCACGAGGATGATACTGCAGGTGTCAACACAGAGAACACTGCA
AAAGAAACGGAGGAAAAAGAACCAGAAGACAAGGTTTGTGTTGTCAGGTTTCTTGGTAGACTTCACTTAAACCTGCAGCCTACCGTTTTACTTGCCATTGGTTTTTCTTG
TTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACCACAAATCCATTTGATTTGTTGGGTGATGACGATGCTGAGGACCCATCGCAGCTAATGGCTGTCAAGCAGGCGGCGGCGGTGGCGCCTAAGAAAGGTTCTGA
TCATCCTCAGGCTAAACAACAGGCGGCTGCGGCAGCTAAATTGAGTAAACCTGCTAATCTTCCTTCCAAGCCTCTTCCGCCTGCTCAGGCTGTAAGGGAAGCAAAGAATG
AAGGTGGTCGTGGAGGTCGTGGTAGTGGGCGTGGTGGAGGTGGACGTGGATATGGACGAGGGCGTGGCAGTGGTGGCTTTAATCGTGAGTCTGCAAATAATGAGTACTCA
TTTAGTAGTAACCCTGAAGATGGAGAAACTGGAAGGACAACAGAAAAGCGTGGTGGATATAGTGGACCTCGTGGTCGTGCTAGCCGTCGTGGTGGTTTTTATAATGGAGA
TGCTGCTGATGGTGAACGCCCTCGTGGTGTATTTGAACGGCACAGTGGAACTGGCCGTGGAAATGAATTCAAGCGTGAAGGGTCTGGGCGTGGGAATTGGGGAAGGTCGA
CTGATGAATTTCCTGAGGTTGCTGAGGAAGCTAATGAATCTCAGAAGTTAGGTGATGAGAAGCCCATTCACGAGGATGATACTGCAGGTGTCAACACAGAGAACACTGCA
AAAGAAACGGAGGAAAAAGAACCAGAAGACAAGGTTTGTGTTGTCAGGTTTCTTGGTAGACTTCACTTAAACCTGCAGCCTACCGTTTTACTTGCCATTGGTTTTTCTTG
TTGACTGAAAATTAATTTGTAGTTTTGCTTGCTTATCAAACAAATTGAATGGGCATTAATAACCTGAGTAGTAGTAATACAGTGGTGGGTTAGGATTATGAACTTCGCTC
TATGTTCAGCATGATTTTGAATCTACCTCGTACTCTTTCTTTTCCCCTAATACAGGAAATGACTCTGGAGGAGTACGAAAAATTGCTGGAAGAGAAAAGGAAGTCCCTTT
TGGCACTGAAAACTGAAGAGAGGAAGGTGGATCCTAAAGAATTTGCATCCTTGCAACAGCTATCAAGCAAAAAGGAAAACCAGGACGTCTTTATTAAATTGGGATCTGAC
AAGGATAAGCGAAAAGAAACTGCAGATAAGGAGGAAAGAACTAAGAAGTCCGTGAGTATCAATGAGTTCTTGAAGCCAGCCGGAGGAGAGAGACACTACAATCCAGGTGG
TAGGGGTAGAGGCCGGGGCCGTGGTTCAAGGGGAGGAGGTTATGTCGGCAGCTCGGTGAGCAGCAATGTTGCAGCCCCGTCGATTGAGGATCCGGGGCATTTCCCAACCT
TAGGTGCAAAATGAATATTCTGAATAAATTGCACTCAAAACTGTGTATATGGTTTTGGGGGCTCTCTTTGATCTGGGGGAATGGCAAGAAGTTGAGTAGAATAATTAGAG
TTTTTCTTTCCTAATGTATTAAAAAAAAAAGTTAAAAAGTTAAATTTGTTTGAATGTAAATTGTCAAAGCCATGTATTTTTCCTTTGTCACACTTTTTCATTATGTGTTT
TTTCCAACTGACTTGCCAGATCAAACTATTTATTTACGACATTTTAGCTTATACCATAATTCTCTATTTCCAAA
Protein sequenceShow/hide protein sequence
MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGFNRESANNEYS
FSSNPEDGETGRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANESQKLGDEKPIHEDDTAGVNTENTA
KETEEKEPEDKVCVVRFLGRLHLNLQPTVLLAIGFSC