; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0016842 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016842
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRING-H2 finger protein ATL74-like
Genome locationchr08:23260049..23261178
RNA-Seq ExpressionPI0016842
SyntenyPI0016842
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044224.1 RING-H2 finger protein ATL74-like [Cucumis melo var. makuwa]3.7e-4381.42Show/hide
Query:  MNFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEVVGAPGLKKRELALIPIGVYGSDANIKGTDCAICLAQFEVSDKLRMLPICNHGFH
        +NF+ HM + LA LLC LIGAVGVNSIVR  LR RYSFE ERAEE   A GLKK+ELALIPIGVYGSDANIK TDCAICLAQFEV DKLRMLPICNHGFH
Subjt:  MNFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEVVGAPGLKKRELALIPIGVYGSDANIKGTDCAICLAQFEVSDKLRMLPICNHGFH

Query:  LTCIDTWLLSHSS
        LTCIDTWLLS+ S
Subjt:  LTCIDTWLLSHSS

KGN58695.1 hypothetical protein Csa_000746 [Cucumis sativus]4.1e-4282.08Show/hide
Query:  MNFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEVVGAPGLKKRELALIPIGVYGSDANIKGTDCAICLAQFEVSDKLRMLPICNHGFH
        MNF+ HM VILA LLCALIGAVGVNSI+R  LRCRYSFE+ERA+E  G PGLKKRE+ALI I VYG+DANIK TDCAICLAQF+V DKLRMLPICNHGFH
Subjt:  MNFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEVVGAPGLKKRELALIPIGVYGSDANIKGTDCAICLAQFEVSDKLRMLPICNHGFH

Query:  LTCIDT
        LTCIDT
Subjt:  LTCIDT

XP_008443568.1 PREDICTED: RING-H2 finger protein ATL74-like [Cucumis melo]1.5e-4482.3Show/hide
Query:  MNFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEVVGAPGLKKRELALIPIGVYGSDANIKGTDCAICLAQFEVSDKLRMLPICNHGFH
        +NF+ HM + LA LLC LIGAVGVNSIVR  LRCRYSFE ERAEE   A GLKK+ELALIPIGVYGSDANIK TDCAICLAQFEV DKLRMLPICNHGFH
Subjt:  MNFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEVVGAPGLKKRELALIPIGVYGSDANIKGTDCAICLAQFEVSDKLRMLPICNHGFH

Query:  LTCIDTWLLSHSS
        LTCIDTWLLS+ S
Subjt:  LTCIDTWLLSHSS

XP_023540727.1 RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]1.3e-3570.09Show/hide
Query:  MNFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEV---VGAPGLKKRELALIPIGVYGSD-ANIKGTDCAICLAQFEVSDKLRMLPICN
        MN +AHM VILA LL ALIGA+GVNS+VR  L   + F  ER EE    + A GLKKREL+ IP+GVYGSD A IKGTDCAICL +FEV DK+RMLPICN
Subjt:  MNFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEV---VGAPGLKKRELALIPIGVYGSD-ANIKGTDCAICLAQFEVSDKLRMLPICN

Query:  HGFHLTCIDTWLLSHSS
        HGFH+ CIDTWLLSHSS
Subjt:  HGFHLTCIDTWLLSHSS

XP_031737578.1 RING-H2 finger protein ATL74-like [Cucumis sativus]7.2e-3983Show/hide
Query:  MAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEVVGAPGLKKRELALIPIGVYGSDANIKGTDCAICLAQFEVSDKLRMLPICNHGFHLTCIDT
        M VILA LLCALIGAVGVNSI+R  LRCRYSFE+ERA+E  G PGLKKRE+ALI I VYG+DANIK TDCAICLAQF+V DKLRMLPICNHGFHLTCIDT
Subjt:  MAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEVVGAPGLKKRELALIPIGVYGSDANIKGTDCAICLAQFEVSDKLRMLPICNHGFHLTCIDT

TrEMBL top hitse value%identityAlignment
A0A0A0L9Q6 RING-type domain-containing protein2.0e-4282.08Show/hide
Query:  MNFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEVVGAPGLKKRELALIPIGVYGSDANIKGTDCAICLAQFEVSDKLRMLPICNHGFH
        MNF+ HM VILA LLCALIGAVGVNSI+R  LRCRYSFE+ERA+E  G PGLKKRE+ALI I VYG+DANIK TDCAICLAQF+V DKLRMLPICNHGFH
Subjt:  MNFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEVVGAPGLKKRELALIPIGVYGSDANIKGTDCAICLAQFEVSDKLRMLPICNHGFH

Query:  LTCIDT
        LTCIDT
Subjt:  LTCIDT

A0A1S3B8C4 RING-H2 finger protein ATL74-like7.3e-4582.3Show/hide
Query:  MNFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEVVGAPGLKKRELALIPIGVYGSDANIKGTDCAICLAQFEVSDKLRMLPICNHGFH
        +NF+ HM + LA LLC LIGAVGVNSIVR  LRCRYSFE ERAEE   A GLKK+ELALIPIGVYGSDANIK TDCAICLAQFEV DKLRMLPICNHGFH
Subjt:  MNFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEVVGAPGLKKRELALIPIGVYGSDANIKGTDCAICLAQFEVSDKLRMLPICNHGFH

Query:  LTCIDTWLLSHSS
        LTCIDTWLLS+ S
Subjt:  LTCIDTWLLSHSS

A0A5A7TM08 RING-H2 finger protein ATL74-like1.8e-4381.42Show/hide
Query:  MNFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEVVGAPGLKKRELALIPIGVYGSDANIKGTDCAICLAQFEVSDKLRMLPICNHGFH
        +NF+ HM + LA LLC LIGAVGVNSIVR  LR RYSFE ERAEE   A GLKK+ELALIPIGVYGSDANIK TDCAICLAQFEV DKLRMLPICNHGFH
Subjt:  MNFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEVVGAPGLKKRELALIPIGVYGSDANIKGTDCAICLAQFEVSDKLRMLPICNHGFH

Query:  LTCIDTWLLSHSS
        LTCIDTWLLS+ S
Subjt:  LTCIDTWLLSHSS

A0A6J1EVU3 RING-H2 finger protein ATL74-like7.5e-3469.23Show/hide
Query:  MNFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEV---VGAPGLKKRELALIPIGVYGSD-ANIKGTDCAICLAQFEVSDKLRMLPICN
        MN +AHM VILA LL ALIGA+GVNS+VR  L   + F  ER EE    + A GLKKREL+ IP+GVYGSD A IKGTDCAICL +FEV DK+RMLP CN
Subjt:  MNFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEV---VGAPGLKKRELALIPIGVYGSD-ANIKGTDCAICLAQFEVSDKLRMLPICN

Query:  HGFHLTCIDTWLLSHSS
        HGFH+ CIDTWLLSHSS
Subjt:  HGFHLTCIDTWLLSHSS

A0A6J1I6E6 RING-H2 finger protein ATL74-like1.4e-3569.23Show/hide
Query:  MNFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEV---VGAPGLKKRELALIPIGVYGSD-ANIKGTDCAICLAQFEVSDKLRMLPICN
        MN +AHM VILA LL ALIGA+GVN++VR  L   + F  ER EE    + A GLKKREL+ IP+GVYGSD A IKGTDCAICL +FEV DK+RMLPICN
Subjt:  MNFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEV---VGAPGLKKRELALIPIGVYGSD-ANIKGTDCAICLAQFEVSDKLRMLPICN

Query:  HGFHLTCIDTWLLSHSS
        HGFH+ CIDTWLLSHSS
Subjt:  HGFHLTCIDTWLLSHSS

SwissProt top hitse value%identityAlignment
Q6NQG7 RING-H2 finger protein ATL781.1e-2139.69Show/hide
Query:  NFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEE----VVGAPGLKKRELALIPIGVYGSDANIKG--TDCAICLAQFEVSDKLRMLPIC
        NF+A++ ++L+ LLCAL+ ++G+NSI+R ALRC      E   +     +   G+K++ L       Y ++ N+ G  T+CAICL++F   +++++LP C
Subjt:  NFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEE----VVGAPGLKKRELALIPIGVYGSDANIKG--TDCAICLAQFEVSDKLRMLPIC

Query:  NHGFHLTCIDTWLLSHSSYFTTRCCDHRQCK
        +HGFH+ CID WL SHSS  T R C  + C+
Subjt:  NHGFHLTCIDTWLLSHSSYFTTRCCDHRQCK

Q9FLC6 RING-H2 finger protein ATL737.3e-2649.18Show/hide
Query:  NFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEVVG-----APGLKKRELALIPIGVYGSDANIKGTDCAICLAQFEVSDKLRMLPICN
        + + HM +ILA LLCALI A+G+NS++R  LRC   F     E+ V      A G+KKR L +IP+  Y  +  +K T+C ICL  F   + +R+LP CN
Subjt:  NFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEVVG-----APGLKKRELALIPIGVYGSDANIKGTDCAICLAQFEVSDKLRMLPICN

Query:  HGFHLTCIDTWLLSHSSYFTTR
        HGFH+ CIDTWLLSHSS  T R
Subjt:  HGFHLTCIDTWLLSHSSYFTTR

Q9LS99 RING-H2 finger protein ATL774.7e-1735.16Show/hide
Query:  NFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEVVGAP-------GLKKRELALIPIGVYGSDANIKGT--DCAICLAQFEVSDKLRML
        N + ++ ++L+ LLC +I ++G++ I+R A     SF +     +   P       G+KK+ L ++P+  Y  + N+ G   +C ICL+ F   ++LR+L
Subjt:  NFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEVVGAP-------GLKKRELALIPIGVYGSDANIKGT--DCAICLAQFEVSDKLRML

Query:  PICNHGFHLTCIDTWLLSHSSYFTTRCC
        P CNHGFHL CID WL  H +    R C
Subjt:  PICNHGFHLTCIDTWLLSHSSYFTTRCC

Q9LZV8 RING-H2 finger protein ATL742.7e-2853.91Show/hide
Query:  MNFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAE-EVVGAPGLKKRELALIPIGVYGS-DANIKGTDCAICLAQFEVSDKLRMLPICNHG
        MNF+A+M +ILA LLCALI A+G+NSI+R A+RC +      A   V    GLKKREL   P+  YGS +  I  T+CAICL +F   +++R+LP CNH 
Subjt:  MNFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAE-EVVGAPGLKKRELALIPIGVYGS-DANIKGTDCAICLAQFEVSDKLRMLPICNHG

Query:  FHLTCIDTWLLSHSS
        FH++CIDTWL+SHSS
Subjt:  FHLTCIDTWLLSHSS

Q9SG96 RING-H2 finger protein ATL721.2e-2346.88Show/hide
Query:  FNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEME-----------RAEEVVGAPGLKKRELALIPIGVYGSD-ANIKGTDCAICLAQFEVSDKLR
        F+ +M +ILA LLCALI A+ +NS +R  LR    F  +               +  A GLKK+ L  IP+G+YGS   ++K T+C ICL  FE  +K+R
Subjt:  FNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEME-----------RAEEVVGAPGLKKRELALIPIGVYGSD-ANIKGTDCAICLAQFEVSDKLR

Query:  MLPICNHGFHLTCIDTWLLSHSSYFTTR
        +LP CNHGFH+ CIDTWLLS SS  T R
Subjt:  MLPICNHGFHLTCIDTWLLSHSSYFTTR

Arabidopsis top hitse value%identityAlignment
AT1G49230.1 RING/U-box superfamily protein7.7e-2339.69Show/hide
Query:  NFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEE----VVGAPGLKKRELALIPIGVYGSDANIKG--TDCAICLAQFEVSDKLRMLPIC
        NF+A++ ++L+ LLCAL+ ++G+NSI+R ALRC      E   +     +   G+K++ L       Y ++ N+ G  T+CAICL++F   +++++LP C
Subjt:  NFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEE----VVGAPGLKKRELALIPIGVYGSDANIKG--TDCAICLAQFEVSDKLRMLPIC

Query:  NHGFHLTCIDTWLLSHSSYFTTRCCDHRQCK
        +HGFH+ CID WL SHSS  T R C  + C+
Subjt:  NHGFHLTCIDTWLLSHSSYFTTRCCDHRQCK

AT3G10910.1 RING/U-box superfamily protein8.2e-2546.88Show/hide
Query:  FNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEME-----------RAEEVVGAPGLKKRELALIPIGVYGSD-ANIKGTDCAICLAQFEVSDKLR
        F+ +M +ILA LLCALI A+ +NS +R  LR    F  +               +  A GLKK+ L  IP+G+YGS   ++K T+C ICL  FE  +K+R
Subjt:  FNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEME-----------RAEEVVGAPGLKKRELALIPIGVYGSD-ANIKGTDCAICLAQFEVSDKLR

Query:  MLPICNHGFHLTCIDTWLLSHSSYFTTR
        +LP CNHGFH+ CIDTWLLS SS  T R
Subjt:  MLPICNHGFHLTCIDTWLLSHSSYFTTR

AT3G18773.1 RING/U-box superfamily protein3.4e-1835.16Show/hide
Query:  NFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEVVGAP-------GLKKRELALIPIGVYGSDANIKGT--DCAICLAQFEVSDKLRML
        N + ++ ++L+ LLC +I ++G++ I+R A     SF +     +   P       G+KK+ L ++P+  Y  + N+ G   +C ICL+ F   ++LR+L
Subjt:  NFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEVVGAP-------GLKKRELALIPIGVYGSDANIKGT--DCAICLAQFEVSDKLRML

Query:  PICNHGFHLTCIDTWLLSHSSYFTTRCC
        P CNHGFHL CID WL  H +    R C
Subjt:  PICNHGFHLTCIDTWLLSHSSYFTTRCC

AT5G01880.1 RING/U-box superfamily protein1.9e-2953.91Show/hide
Query:  MNFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAE-EVVGAPGLKKRELALIPIGVYGS-DANIKGTDCAICLAQFEVSDKLRMLPICNHG
        MNF+A+M +ILA LLCALI A+G+NSI+R A+RC +      A   V    GLKKREL   P+  YGS +  I  T+CAICL +F   +++R+LP CNH 
Subjt:  MNFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAE-EVVGAPGLKKRELALIPIGVYGS-DANIKGTDCAICLAQFEVSDKLRMLPICNHG

Query:  FHLTCIDTWLLSHSS
        FH++CIDTWL+SHSS
Subjt:  FHLTCIDTWLLSHSS

AT5G05280.1 RING/U-box superfamily protein5.2e-2749.18Show/hide
Query:  NFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEVVG-----APGLKKRELALIPIGVYGSDANIKGTDCAICLAQFEVSDKLRMLPICN
        + + HM +ILA LLCALI A+G+NS++R  LRC   F     E+ V      A G+KKR L +IP+  Y  +  +K T+C ICL  F   + +R+LP CN
Subjt:  NFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEVVG-----APGLKKRELALIPIGVYGSDANIKGTDCAICLAQFEVSDKLRMLPICN

Query:  HGFHLTCIDTWLLSHSSYFTTR
        HGFH+ CIDTWLLSHSS  T R
Subjt:  HGFHLTCIDTWLLSHSSYFTTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTCAATGCACACATGGCAGTAATACTAGCGACTTTATTATGTGCACTCATTGGAGCGGTTGGAGTGAATTCTATTGTACGCTATGCTTTACGATGTAGGTATAG
TTTTGAGATGGAGAGGGCAGAGGAGGTCGTTGGCGCACCGGGGCTTAAGAAGCGAGAACTTGCTCTGATTCCGATTGGGGTTTATGGAAGTGATGCAAATATTAAGGGCA
CAGATTGCGCAATTTGCCTTGCCCAGTTTGAGGTGAGCGACAAGCTCAGAATGTTGCCCATTTGCAACCATGGATTCCACCTCACATGCATTGATACTTGGCTCTTGTCT
CACTCCTCATACTTCACCACACGTTGTTGTGATCATAGACAATGTAAATTAGGCAACCCATGCATCCACCACGTACTATCCGTGTGTGTATAG
mRNA sequenceShow/hide mRNA sequence
CTCATTCTCCACCAGAATCCGAAAAAAGAAGGATATATTTTGGTGAGCAACCCATATTTCTCTCTCTTTTATCCTTACACCTACATTCACTACCATCTCCATCTCTAATT
CTCACCATTCACCATTACCTTGCCGTCTAATCAAAACGGAAGGGACTCCTTATCCAATTGCATTTTGCCATCTACAACTAACCACACATCTCAAAATCCAATTCATAAAT
TAATCCTAATCTTAATCCTATCTCTATTACATATTACATTAAAACAAATATCAATTACGTGTCCACTCTCTAACATATTTCTTGCCCATGGTTTCTTATCGCTCACTAAC
TTCATCATCTAACCTACCTCCAAAAGTTTTTGTATTTTATTTTTTAAATAACAACCAGGTTGCGACAAACAAACAATCGCTCGCTATAAAATCCTTTGCTATAGCTTGTA
TGCACAACACCTATTCTATTATCATTAATTAAACCCATAAAACATGCTAATTTTAGTTTAGAATGATGGATCAAAAACAATGACCGGGGCTTGCGAAAACATATGTAGTG
CAGGAAAACAGGACGGACAATTGATCTAATTATGTGGGGGAAATGAATTTCAATGCACACATGGCAGTAATACTAGCGACTTTATTATGTGCACTCATTGGAGCGGTTGG
AGTGAATTCTATTGTACGCTATGCTTTACGATGTAGGTATAGTTTTGAGATGGAGAGGGCAGAGGAGGTCGTTGGCGCACCGGGGCTTAAGAAGCGAGAACTTGCTCTGA
TTCCGATTGGGGTTTATGGAAGTGATGCAAATATTAAGGGCACAGATTGCGCAATTTGCCTTGCCCAGTTTGAGGTGAGCGACAAGCTCAGAATGTTGCCCATTTGCAAC
CATGGATTCCACCTCACATGCATTGATACTTGGCTCTTGTCTCACTCCTCATACTTCACCACACGTTGTTGTGATCATAGACAATGTAAATTAGGCAACCCATGCATCCA
CCACGTACTATCCGTGTGTGTATAGACGACTCTTTATATATTGTTGTCTTTGCAATTTTGAGTTTGCAGAGACTGTTGATACTTTTTAGCAGTATACTCTTTTTTTTCGT
GAAAAAAAAGAAAATGAAATAAGAGATGAA
Protein sequenceShow/hide protein sequence
MNFNAHMAVILATLLCALIGAVGVNSIVRYALRCRYSFEMERAEEVVGAPGLKKRELALIPIGVYGSDANIKGTDCAICLAQFEVSDKLRMLPICNHGFHLTCIDTWLLS
HSSYFTTRCCDHRQCKLGNPCIHHVLSVCV