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PI0016861 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016861
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr04:19581192..19581812
RNA-Seq ExpressionPI0016861
SyntenyPI0016861
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046247.1 uncharacterized protein E6C27_scaffold284G00450 [Cucumis melo var. makuwa]3.9e-3856.95Show/hide
Query:  MEDFNAIQVHFEACGGSPVSGDMEEFDIAICEVDLVESSVQG--VEQNGRVVSFHFFNHWVDDPSFSDVVSSVWVRRLGVSSLVSLMRNLHDFKPTLGKH
        M DFNAI+V+ EA GGSP+ G+ME+FD+AI +VDLVE  VQG   + N +VVSF FFNHWV+DPSF +VV+  W R  GVS LVSLM+NLH  KP L   
Subjt:  MEDFNAIQVHFEACGGSPVSGDMEEFDIAICEVDLVESSVQG--VEQNGRVVSFHFFNHWVDDPSFSDVVSSVWVRRLGVSSLVSLMRNLHDFKPTLGKH

Query:  FG-SIWGLSKEVRIAKESMDTAQREVEWDPGFDEVNRPVGLATEAFWSTIQ
        FG  I  L+++VRIAK +MD AQR+VE +P  D ++R   LATE FW+ ++
Subjt:  FG-SIWGLSKEVRIAKESMDTAQREVEWDPGFDEVNRPVGLATEAFWSTIQ

KAA0048521.1 uncharacterized protein E6C27_scaffold61G001420 [Cucumis melo var. makuwa]2.2e-4159.09Show/hide
Query:  MEDFNAIQVHFEACGGSPVSGDMEEFDIAICEVDLVESSVQG-----VEQNGRVVSFHFFNHWVDDPSFSDVVSSVWVRRLGVSSLVSLMRNLHDFKPTL
        M DFNAI+VH EA GGSP+ G+ME+FD+AI + DLVE SVQG       +N RVVSF FFNHW++DPSF +VVS +W R  GVS LVSL+RNL   K T+
Subjt:  MEDFNAIQVHFEACGGSPVSGDMEEFDIAICEVDLVESSVQG-----VEQNGRVVSFHFFNHWVDDPSFSDVVSSVWVRRLGVSSLVSLMRNLHDFKPTL

Query:  GKHFG-SIWGLSKEVRIAKESMDTAQREVEWDPGFDEVNRPVGLATEAFWSTIQ
         +HFG  I  LS+EVR AKE+MD AQREV+ +P  D ++R  GLATEAFW+ ++
Subjt:  GKHFG-SIWGLSKEVRIAKESMDTAQREVEWDPGFDEVNRPVGLATEAFWSTIQ

TYK18951.1 uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa]6.6e-3854.37Show/hide
Query:  MEDFNAIQVHFEACGGSPVSGDMEEFDIAICEVDLVE-----------SSVQGVEQNGRVVSFHFFNHWVDDPSFSDVVSSVWVRRLGVSSLVSLMRNLH
        M DFNAI+V+ EA GGSP+ G+ME+FD+AI +VDLVE           S VQG + N +VVSF FFNHWV+DPSF +VV+  W R  GVS LVSLM+NLH
Subjt:  MEDFNAIQVHFEACGGSPVSGDMEEFDIAICEVDLVE-----------SSVQGVEQNGRVVSFHFFNHWVDDPSFSDVVSSVWVRRLGVSSLVSLMRNLH

Query:  DFKPTLGKHFG-SIWGLSKEVRIAKESMDTAQREVEWDPGFDEVNRPVGLATEAFWSTIQ
          KP L   FG  I  L+++VRIAK +MD AQR+VE +P  D ++R   LATE FW+ ++
Subjt:  DFKPTLGKHFG-SIWGLSKEVRIAKESMDTAQREVEWDPGFDEVNRPVGLATEAFWSTIQ

TYK28312.1 uncharacterized protein E5676_scaffold600G001370 [Cucumis melo var. makuwa]4.4e-4259.74Show/hide
Query:  MEDFNAIQVHFEACGGSPVSGDMEEFDIAICEVDLVESSVQG-----VEQNGRVVSFHFFNHWVDDPSFSDVVSSVWVRRLGVSSLVSLMRNLHDFKPTL
        M DFNAI+VH EA GGSP+ G+ME+FD+AI + DLVE SVQG       +N RVVSF FFNHW++DPSF +VVS +W R  GVS LVSL+RNL   K T+
Subjt:  MEDFNAIQVHFEACGGSPVSGDMEEFDIAICEVDLVESSVQG-----VEQNGRVVSFHFFNHWVDDPSFSDVVSSVWVRRLGVSSLVSLMRNLHDFKPTL

Query:  GKHFG-SIWGLSKEVRIAKESMDTAQREVEWDPGFDEVNRPVGLATEAFWSTIQ
         +HFG  I  LS+EVR AKE+MD AQREV+ +P  D ++R  GLATEAFW+T++
Subjt:  GKHFG-SIWGLSKEVRIAKESMDTAQREVEWDPGFDEVNRPVGLATEAFWSTIQ

XP_008463187.1 PREDICTED: uncharacterized protein LOC103501395 [Cucumis melo]3.9e-3856.95Show/hide
Query:  MEDFNAIQVHFEACGGSPVSGDMEEFDIAICEVDLVESSVQG--VEQNGRVVSFHFFNHWVDDPSFSDVVSSVWVRRLGVSSLVSLMRNLHDFKPTLGKH
        M DFNAI+V+ EA GGSP+ G+ME+FD+AI +VDLVE  VQG   + N +VVSF FFNHWV+DPSF +VV+  W R  GVS LVSLM+NLH  KP L   
Subjt:  MEDFNAIQVHFEACGGSPVSGDMEEFDIAICEVDLVESSVQG--VEQNGRVVSFHFFNHWVDDPSFSDVVSSVWVRRLGVSSLVSLMRNLHDFKPTLGKH

Query:  FG-SIWGLSKEVRIAKESMDTAQREVEWDPGFDEVNRPVGLATEAFWSTIQ
        FG  I  L+++VRIAK +MD AQR+VE +P  D ++R   LATE FW+ ++
Subjt:  FG-SIWGLSKEVRIAKESMDTAQREVEWDPGFDEVNRPVGLATEAFWSTIQ

TrEMBL top hitse value%identityAlignment
A0A1S3CJ11 uncharacterized protein LOC1035013951.9e-3856.95Show/hide
Query:  MEDFNAIQVHFEACGGSPVSGDMEEFDIAICEVDLVESSVQG--VEQNGRVVSFHFFNHWVDDPSFSDVVSSVWVRRLGVSSLVSLMRNLHDFKPTLGKH
        M DFNAI+V+ EA GGSP+ G+ME+FD+AI +VDLVE  VQG   + N +VVSF FFNHWV+DPSF +VV+  W R  GVS LVSLM+NLH  KP L   
Subjt:  MEDFNAIQVHFEACGGSPVSGDMEEFDIAICEVDLVESSVQG--VEQNGRVVSFHFFNHWVDDPSFSDVVSSVWVRRLGVSSLVSLMRNLHDFKPTLGKH

Query:  FG-SIWGLSKEVRIAKESMDTAQREVEWDPGFDEVNRPVGLATEAFWSTIQ
        FG  I  L+++VRIAK +MD AQR+VE +P  D ++R   LATE FW+ ++
Subjt:  FG-SIWGLSKEVRIAKESMDTAQREVEWDPGFDEVNRPVGLATEAFWSTIQ

A0A5A7TWG5 Reverse transcriptase domain-containing protein1.9e-3856.95Show/hide
Query:  MEDFNAIQVHFEACGGSPVSGDMEEFDIAICEVDLVESSVQG--VEQNGRVVSFHFFNHWVDDPSFSDVVSSVWVRRLGVSSLVSLMRNLHDFKPTLGKH
        M DFNAI+V+ EA GGSP+ G+ME+FD+AI +VDLVE  VQG   + N +VVSF FFNHWV+DPSF +VV+  W R  GVS LVSLM+NLH  KP L   
Subjt:  MEDFNAIQVHFEACGGSPVSGDMEEFDIAICEVDLVESSVQG--VEQNGRVVSFHFFNHWVDDPSFSDVVSSVWVRRLGVSSLVSLMRNLHDFKPTLGKH

Query:  FG-SIWGLSKEVRIAKESMDTAQREVEWDPGFDEVNRPVGLATEAFWSTIQ
        FG  I  L+++VRIAK +MD AQR+VE +P  D ++R   LATE FW+ ++
Subjt:  FG-SIWGLSKEVRIAKESMDTAQREVEWDPGFDEVNRPVGLATEAFWSTIQ

A0A5A7U4M4 Reverse transcriptase domain-containing protein1.1e-4159.09Show/hide
Query:  MEDFNAIQVHFEACGGSPVSGDMEEFDIAICEVDLVESSVQG-----VEQNGRVVSFHFFNHWVDDPSFSDVVSSVWVRRLGVSSLVSLMRNLHDFKPTL
        M DFNAI+VH EA GGSP+ G+ME+FD+AI + DLVE SVQG       +N RVVSF FFNHW++DPSF +VVS +W R  GVS LVSL+RNL   K T+
Subjt:  MEDFNAIQVHFEACGGSPVSGDMEEFDIAICEVDLVESSVQG-----VEQNGRVVSFHFFNHWVDDPSFSDVVSSVWVRRLGVSSLVSLMRNLHDFKPTL

Query:  GKHFG-SIWGLSKEVRIAKESMDTAQREVEWDPGFDEVNRPVGLATEAFWSTIQ
         +HFG  I  LS+EVR AKE+MD AQREV+ +P  D ++R  GLATEAFW+ ++
Subjt:  GKHFG-SIWGLSKEVRIAKESMDTAQREVEWDPGFDEVNRPVGLATEAFWSTIQ

A0A5D3D5X6 Reverse transcriptase domain-containing protein3.2e-3854.37Show/hide
Query:  MEDFNAIQVHFEACGGSPVSGDMEEFDIAICEVDLVE-----------SSVQGVEQNGRVVSFHFFNHWVDDPSFSDVVSSVWVRRLGVSSLVSLMRNLH
        M DFNAI+V+ EA GGSP+ G+ME+FD+AI +VDLVE           S VQG + N +VVSF FFNHWV+DPSF +VV+  W R  GVS LVSLM+NLH
Subjt:  MEDFNAIQVHFEACGGSPVSGDMEEFDIAICEVDLVE-----------SSVQGVEQNGRVVSFHFFNHWVDDPSFSDVVSSVWVRRLGVSSLVSLMRNLH

Query:  DFKPTLGKHFG-SIWGLSKEVRIAKESMDTAQREVEWDPGFDEVNRPVGLATEAFWSTIQ
          KP L   FG  I  L+++VRIAK +MD AQR+VE +P  D ++R   LATE FW+ ++
Subjt:  DFKPTLGKHFG-SIWGLSKEVRIAKESMDTAQREVEWDPGFDEVNRPVGLATEAFWSTIQ

A0A5D3DXQ8 Reverse transcriptase domain-containing protein2.1e-4259.74Show/hide
Query:  MEDFNAIQVHFEACGGSPVSGDMEEFDIAICEVDLVESSVQG-----VEQNGRVVSFHFFNHWVDDPSFSDVVSSVWVRRLGVSSLVSLMRNLHDFKPTL
        M DFNAI+VH EA GGSP+ G+ME+FD+AI + DLVE SVQG       +N RVVSF FFNHW++DPSF +VVS +W R  GVS LVSL+RNL   K T+
Subjt:  MEDFNAIQVHFEACGGSPVSGDMEEFDIAICEVDLVESSVQG-----VEQNGRVVSFHFFNHWVDDPSFSDVVSSVWVRRLGVSSLVSLMRNLHDFKPTL

Query:  GKHFG-SIWGLSKEVRIAKESMDTAQREVEWDPGFDEVNRPVGLATEAFWSTIQ
         +HFG  I  LS+EVR AKE+MD AQREV+ +P  D ++R  GLATEAFW+T++
Subjt:  GKHFG-SIWGLSKEVRIAKESMDTAQREVEWDPGFDEVNRPVGLATEAFWSTIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATTTTAATGCTATTCAAGTGCACTTTGAAGCTTGTGGTGGGAGTCCGGTTTCTGGTGATATGGAGGAGTTTGATATTGCTATTTGTGAGGTTGACTTAGTTGA
GTCGTCCGTTCAGGGCGTTGAGCAAAATGGGAGAGTTGTGTCGTTTCATTTCTTTAACCATTGGGTGGATGATCCTTCTTTCAGTGATGTGGTGTCTTCGGTTTGGGTGA
GAAGGCTTGGCGTTTCTTCTTTAGTGAGTCTCATGCGGAATTTACATGATTTTAAGCCTACCCTTGGTAAACATTTTGGTAGCATTTGGGGCCTTAGTAAGGAGGTGCGC
ATTGCTAAAGAGTCTATGGATACGGCCCAGCGAGAGGTTGAATGGGATCCTGGGTTTGATGAGGTGAATCGTCCAGTTGGCCTTGCCACTGAGGCTTTCTGGTCAACTAT
CCAAACATCTCTTCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATTTTAATGCTATTCAAGTGCACTTTGAAGCTTGTGGTGGGAGTCCGGTTTCTGGTGATATGGAGGAGTTTGATATTGCTATTTGTGAGGTTGACTTAGTTGA
GTCGTCCGTTCAGGGCGTTGAGCAAAATGGGAGAGTTGTGTCGTTTCATTTCTTTAACCATTGGGTGGATGATCCTTCTTTCAGTGATGTGGTGTCTTCGGTTTGGGTGA
GAAGGCTTGGCGTTTCTTCTTTAGTGAGTCTCATGCGGAATTTACATGATTTTAAGCCTACCCTTGGTAAACATTTTGGTAGCATTTGGGGCCTTAGTAAGGAGGTGCGC
ATTGCTAAAGAGTCTATGGATACGGCCCAGCGAGAGGTTGAATGGGATCCTGGGTTTGATGAGGTGAATCGTCCAGTTGGCCTTGCCACTGAGGCTTTCTGGTCAACTAT
CCAAACATCTCTTCGTTAG
Protein sequenceShow/hide protein sequence
MEDFNAIQVHFEACGGSPVSGDMEEFDIAICEVDLVESSVQGVEQNGRVVSFHFFNHWVDDPSFSDVVSSVWVRRLGVSSLVSLMRNLHDFKPTLGKHFGSIWGLSKEVR
IAKESMDTAQREVEWDPGFDEVNRPVGLATEAFWSTIQTSLR