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PI0016876 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016876
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionE3 ubiquitin-protein ligase RING1-like
Genome locationchr05:553600..554314
RNA-Seq ExpressionPI0016876
SyntenyPI0016876
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651509.1 hypothetical protein Csa_019434 [Cucumis sativus]9.0e-5994.92Show/hide
Query:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDFSCCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
        MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADD  CCQITPSDSPVADFPTVVADVCAVCLDDF PDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
Subjt:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDFSCCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR

Query:  CLVAGQPPDSPDSTLIRR
        CLVAGQP   PDSTLIRR
Subjt:  CLVAGQPPDSPDSTLIRR

XP_004150849.1 E3 ubiquitin-protein ligase RNF181 [Cucumis sativus]9.0e-5994.92Show/hide
Query:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDFSCCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
        MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADD  CCQITPSDSPVADFPTVVADVCAVCLDDF PDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
Subjt:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDFSCCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR

Query:  CLVAGQPPDSPDSTLIRR
        CLVAGQP   PDSTLIRR
Subjt:  CLVAGQPPDSPDSTLIRR

XP_016901521.1 PREDICTED: RING-H2 finger protein ATL5-like [Cucumis melo]3.8e-5793.28Show/hide
Query:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDFSC-CQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC
        MAAAAVMTEPT+ LPSPYPIEFLFDLDTVLSGADD  C CQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC
Subjt:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDFSC-CQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC

Query:  RCLVAGQPPDSPDSTLIRR
        RCLVAGQP   PDSTLIRR
Subjt:  RCLVAGQPPDSPDSTLIRR

XP_022946863.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]4.5e-5081.36Show/hide
Query:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDFSCCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
        MAA +V  E T NL + YPIEFLFDLD VLSGADDF CCQI+ SDS VAD PTVVADVCAVCL+DFRPDE GKQIPCGHVYHESCISSWL VA+CCPLCR
Subjt:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDFSCCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR

Query:  CLVAGQPPDSPDSTLIRR
        CL+AGQPP+SP STLIRR
Subjt:  CLVAGQPPDSPDSTLIRR

XP_038877422.1 E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida]6.9e-5185.59Show/hide
Query:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDFSCCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
        MAAAAVMTEPT NLP+ YPIEFLFDLD VLSGADDF CCQI+ +DS VAD P VVADVCAVCL+DF PDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
Subjt:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDFSCCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR

Query:  CLVAGQPPDSPDSTLIRR
        C VAGQP   PDSTLIRR
Subjt:  CLVAGQPPDSPDSTLIRR

TrEMBL top hitse value%identityAlignment
A0A0A0LKR7 RING-type domain-containing protein4.4e-5994.92Show/hide
Query:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDFSCCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
        MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADD  CCQITPSDSPVADFPTVVADVCAVCLDDF PDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
Subjt:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDFSCCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR

Query:  CLVAGQPPDSPDSTLIRR
        CLVAGQP   PDSTLIRR
Subjt:  CLVAGQPPDSPDSTLIRR

A0A1S4DZX3 RING-H2 finger protein ATL5-like1.8e-5793.28Show/hide
Query:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDFSC-CQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC
        MAAAAVMTEPT+ LPSPYPIEFLFDLDTVLSGADD  C CQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC
Subjt:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDFSC-CQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC

Query:  RCLVAGQPPDSPDSTLIRR
        RCLVAGQP   PDSTLIRR
Subjt:  RCLVAGQPPDSPDSTLIRR

A0A5A7V2P4 RING-H2 finger protein ATL5-like1.8e-5793.28Show/hide
Query:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDFSC-CQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC
        MAAAAVMTEPT+ LPSPYPIEFLFDLDTVLSGADD  C CQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC
Subjt:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDFSC-CQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLC

Query:  RCLVAGQPPDSPDSTLIRR
        RCLVAGQP   PDSTLIRR
Subjt:  RCLVAGQPPDSPDSTLIRR

A0A6J1DM93 E3 ubiquitin-protein ligase RHA1B-like9.5e-3870.8Show/hide
Query:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDFSCCQIT---PSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCP
        MAA AV+ E T NL + YP+E LFDLD VLSG DDF CC +T    SDS VAD PTVVADVCAVC +DFR DE GKQIPCGHVYHE CISSWL VADCCP
Subjt:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDFSCCQIT---PSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCP

Query:  LCRCLVAGQPPDS
        LCR  V   PP S
Subjt:  LCRCLVAGQPPDS

A0A6J1G511 E3 ubiquitin-protein ligase RING1-like2.2e-5081.36Show/hide
Query:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDFSCCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
        MAA +V  E T NL + YPIEFLFDLD VLSGADDF CCQI+ SDS VAD PTVVADVCAVCL+DFRPDE GKQIPCGHVYHESCISSWL VA+CCPLCR
Subjt:  MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDFSCCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR

Query:  CLVAGQPPDSPDSTLIRR
        CL+AGQPP+SP STLIRR
Subjt:  CLVAGQPPDSPDSTLIRR

SwissProt top hitse value%identityAlignment
P0CH30 E3 ubiquitin-protein ligase RING13.1e-0946.3Show/hide
Query:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSPD
        CAVC+DDF      KQ+PC H+YH+ C+  WL + + CP+CR  +   P D PD
Subjt:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSPD

Q6IRP0 E3 ubiquitin-protein ligase RNF126-B2.0e-0840.98Show/hide
Query:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQ-----PPDSPDST
        C VC +D+   E+ +Q+PC H++H  CI  WL   D CP+CR  ++GQ     PP   D T
Subjt:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQ-----PPDSPDST

Q8LPN7 E3 ubiquitin-protein ligase RING1-like1.5e-0844.44Show/hide
Query:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSPD
        CAVC+D+F      KQ+PC HV+H+ C+  WL + + CP+CR  +   P D PD
Subjt:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSPD

Q91YL2 E3 ubiquitin-protein ligase RNF1262.0e-0845.83Show/hide
Query:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQ
        C VC +D+   E+ +Q+PC H++H+SCI  WL   D CP+CR  + GQ
Subjt:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQ

Q9VHI7 E3 ubiquitin-protein ligase Iruka2.8e-1044.44Show/hide
Query:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSPD
        C++C DDF+ DE  +++PC H+YHE+CI  WL +   CP+CR  +A    D+ D
Subjt:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSPD

Arabidopsis top hitse value%identityAlignment
AT1G68180.1 RING/U-box superfamily protein1.7e-1045.28Show/hide
Query:  VADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
        + D   V   VCA+C ++F   E GK++ C H+YH SCI SWL + + CP+CR
Subjt:  VADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR

AT2G44330.1 RING/U-box superfamily protein1.8e-0950Show/hide
Query:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
        CA+C +DF   E+ +++PC H+YH  CI  WLT  + CPLCR
Subjt:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR

AT3G19950.1 RING/U-box superfamily protein1.1e-0944.44Show/hide
Query:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSPD
        CAVC+D+F      KQ+PC HV+H+ C+  WL + + CP+CR  +   P D PD
Subjt:  CAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDSPD

AT3G60080.1 RING/U-box superfamily protein1.4e-0931.3Show/hide
Query:  AVMTEPTINLPSPYPIEFLFDLDTVLSGADDFSCCQITPS---DSPVADFPTVVAD----------------VCAVCLDDFRPDEAGKQIPCGHVYHESC
        AV ++    L SPY    L  L +  SG+   S    + S    S +   PT+                   +CAVC +DF   E+ +++PC H+YH  C
Subjt:  AVMTEPTINLPSPYPIEFLFDLDTVLSGADDFSCCQITPS---DSPVADFPTVVAD----------------VCAVCLDDFRPDEAGKQIPCGHVYHESC

Query:  ISSWLTVADCCPLCR
        I  WL+  + CPLCR
Subjt:  ISSWLTVADCCPLCR

AT5G64920.1 COP1-interacting protein 82.4e-0953.49Show/hide
Query:  VCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR
        VCAVC D     E GK++PCGH YH  CI  WL   + CP+CR
Subjt:  VCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCGCTGCTGTCATGACTGAACCCACAATAAACTTACCGTCGCCATATCCAATCGAATTTCTCTTTGACCTCGACACAGTTCTCTCCGGAGCCGACGACTTCAG
TTGCTGCCAGATCACCCCTTCCGATTCTCCTGTGGCGGATTTCCCGACGGTTGTGGCCGATGTTTGTGCCGTTTGTTTGGACGATTTCCGGCCAGATGAAGCCGGTAAAC
AAATCCCCTGCGGACACGTGTACCATGAGTCTTGTATTTCCTCTTGGCTTACCGTCGCTGACTGCTGCCCTCTCTGTCGGTGCCTTGTCGCTGGCCAACCGCCGGATTCG
CCGGATTCGACTTTGATCCGACGGTAG
mRNA sequenceShow/hide mRNA sequence
ACAAAAGAAATGAGTGTATAAGAATAAAGCCCTCTCACACAAATAAAACCCGCTATCTACTCCTCCATTTCCTTACTTCCTAAACCACTTTCTCTCTTAAATTCTCTCAA
TAATCTCTCCAATGGCTGCCGCTGCTGTCATGACTGAACCCACAATAAACTTACCGTCGCCATATCCAATCGAATTTCTCTTTGACCTCGACACAGTTCTCTCCGGAGCC
GACGACTTCAGTTGCTGCCAGATCACCCCTTCCGATTCTCCTGTGGCGGATTTCCCGACGGTTGTGGCCGATGTTTGTGCCGTTTGTTTGGACGATTTCCGGCCAGATGA
AGCCGGTAAACAAATCCCCTGCGGACACGTGTACCATGAGTCTTGTATTTCCTCTTGGCTTACCGTCGCTGACTGCTGCCCTCTCTGTCGGTGCCTTGTCGCTGGCCAAC
CGCCGGATTCGCCGGATTCGACTTTGATCCGACGGTAGAGATTTTTCTTTCTTTCTTTTTTCCTTTTTGTTGGTGAGGTTTGTTCGACAAATTACAAGTAATTAATTGTT
GTTAATTATTGTGATTGCGACTCTTCGCCAAATTTGGAATTAGCTGCTAATTGAACATATCTCTCTCTCTCTTAATTTATTTTTCTAAAGTTCGCTAAAAACGAGTTTAG
TTTAACCTACACCTAACTTACTTTTAAAAATGGACATATTTAGTTTAAGAAATGA
Protein sequenceShow/hide protein sequence
MAAAAVMTEPTINLPSPYPIEFLFDLDTVLSGADDFSCCQITPSDSPVADFPTVVADVCAVCLDDFRPDEAGKQIPCGHVYHESCISSWLTVADCCPLCRCLVAGQPPDS
PDSTLIRR