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PI0016883 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016883
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr06:16105118..16105513
RNA-Seq ExpressionPI0016883
SyntenyPI0016883
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041114.1 hypothetical protein E6C27_scaffold128G00170 [Cucumis melo var. makuwa]5.2e-1553.61Show/hide
Query:  SDFLGRPPGSLPSNTKMPNQAGGFGKEKCQAVTLRSGRNLTIRDPETE-PSNSTSHSNAEIGNSSNVPDLVHFPLTNNISSSQNEDVPSKGMESTRQ
        SD + +  G LPSNT+MPNQ GG GKEKCQ V L+SGRN T  + +    + STS    EI NSS+  + ++FPLTNN SS QN+ VP+K +E+TRQ
Subjt:  SDFLGRPPGSLPSNTKMPNQAGGFGKEKCQAVTLRSGRNLTIRDPETE-PSNSTSHSNAEIGNSSNVPDLVHFPLTNNISSSQNEDVPSKGMESTRQ

KAA0041246.1 uncharacterized protein E6C27_scaffold128G002220 [Cucumis melo var. makuwa]8.0e-3263.57Show/hide
Query:  QKNDALLQSQASSIRNLEVQLGQLASDFLGRPPGSLPSNTKMPNQAGGFGKEKCQAVTLRSGRNLTIRDPETEPSNSTSHSNAEIGNSSNVPDLVHFPLT
        Q NDALLQSQASSI+NLE+QLGQL S+   RP GSLPSNT+ PNQ GG GKEKCQ VTLRS RNLTIR+P+ E  NSTS S  +IG++SN  + ++  LT
Subjt:  QKNDALLQSQASSIRNLEVQLGQLASDFLGRPPGSLPSNTKMPNQAGGFGKEKCQAVTLRSGRNLTIRDPETEPSNSTSHSNAEIGNSSNVPDLVHFPLT

Query:  NNISSSQNEDVPSKGMESTRQRDQRSEAS
        NN SS QN+++P+K +ESTR+ +QR E S
Subjt:  NNISSSQNEDVPSKGMESTRQRDQRSEAS

KGN51008.1 hypothetical protein Csa_008461 [Cucumis sativus]8.9e-1566.22Show/hide
Query:  MQKNDALLQSQASSIRNLEVQLGQLASDFLGRPPGSLPSNTKMPNQAGGFGKEKCQAVTLRSGRNLTIRDPETE
        MQ+NDALLQSQASSI+NLE+QLGQLA+D   RP G+L  NTK P Q GG   +K Q VTLRS RNLTI + E+E
Subjt:  MQKNDALLQSQASSIRNLEVQLGQLASDFLGRPPGSLPSNTKMPNQAGGFGKEKCQAVTLRSGRNLTIRDPETE

TYK21908.1 hypothetical protein E5676_scaffold494G00460 [Cucumis melo var. makuwa]2.6e-1454.08Show/hide
Query:  SDFLGRPPGSLPSNTKMPNQAGGFGKEKCQAVTLRSGRNLTI--RDPETEPSNSTSHSNAEIGNSSNVPDLVHFPLTNNISSSQNEDVPSKGMESTRQ
        SD + +  G LPSNT+MPNQ GG  KEKCQ V L+SGRN T     P  E + STS    EI NSS+  + ++FPLTNN SS QN+ VP+K +E+TRQ
Subjt:  SDFLGRPPGSLPSNTKMPNQAGGFGKEKCQAVTLRSGRNLTI--RDPETEPSNSTSHSNAEIGNSSNVPDLVHFPLTNNISSSQNEDVPSKGMESTRQ

WP_217833224.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]2.0e-1468.18Show/hide
Query:  MQKNDALLQSQASSIRNLEVQLGQLASDFLGRPPGSLPSNTKMPNQAGGFGKEKCQAVTLRSGRNL
        MQKNDAL+Q+QASSIRNL++QLGQ+A +F  R  GSLPSNT+ P   G  GKE+CQAVTLRSG+ L
Subjt:  MQKNDALLQSQASSIRNLEVQLGQLASDFLGRPPGSLPSNTKMPNQAGGFGKEKCQAVTLRSGRNL

TrEMBL top hitse value%identityAlignment
A0A0A0KMN3 Uncharacterized protein8.1e-1468.33Show/hide
Query:  MQKNDALLQSQASSIRNLEVQLGQLASDFLGRPPGSLPSNTKMPNQAGGFGKEKCQAVTL
        MQ+NDALLQSQA+SI+NLE+Q+GQ+A+D   +P G+LPSNT++P Q G  GKEKCQAVTL
Subjt:  MQKNDALLQSQASSIRNLEVQLGQLASDFLGRPPGSLPSNTKMPNQAGGFGKEKCQAVTL

A0A0A0KN83 Uncharacterized protein4.3e-1566.22Show/hide
Query:  MQKNDALLQSQASSIRNLEVQLGQLASDFLGRPPGSLPSNTKMPNQAGGFGKEKCQAVTLRSGRNLTIRDPETE
        MQ+NDALLQSQASSI+NLE+QLGQLA+D   RP G+L  NTK P Q GG   +K Q VTLRS RNLTI + E+E
Subjt:  MQKNDALLQSQASSIRNLEVQLGQLASDFLGRPPGSLPSNTKMPNQAGGFGKEKCQAVTLRSGRNLTIRDPETE

A0A5A7TCC3 Uncharacterized protein2.5e-1553.61Show/hide
Query:  SDFLGRPPGSLPSNTKMPNQAGGFGKEKCQAVTLRSGRNLTIRDPETE-PSNSTSHSNAEIGNSSNVPDLVHFPLTNNISSSQNEDVPSKGMESTRQ
        SD + +  G LPSNT+MPNQ GG GKEKCQ V L+SGRN T  + +    + STS    EI NSS+  + ++FPLTNN SS QN+ VP+K +E+TRQ
Subjt:  SDFLGRPPGSLPSNTKMPNQAGGFGKEKCQAVTLRSGRNLTIRDPETE-PSNSTSHSNAEIGNSSNVPDLVHFPLTNNISSSQNEDVPSKGMESTRQ

A0A5A7TGS2 Uncharacterized protein3.9e-3263.57Show/hide
Query:  QKNDALLQSQASSIRNLEVQLGQLASDFLGRPPGSLPSNTKMPNQAGGFGKEKCQAVTLRSGRNLTIRDPETEPSNSTSHSNAEIGNSSNVPDLVHFPLT
        Q NDALLQSQASSI+NLE+QLGQL S+   RP GSLPSNT+ PNQ GG GKEKCQ VTLRS RNLTIR+P+ E  NSTS S  +IG++SN  + ++  LT
Subjt:  QKNDALLQSQASSIRNLEVQLGQLASDFLGRPPGSLPSNTKMPNQAGGFGKEKCQAVTLRSGRNLTIRDPETEPSNSTSHSNAEIGNSSNVPDLVHFPLT

Query:  NNISSSQNEDVPSKGMESTRQRDQRSEAS
        NN SS QN+++P+K +ESTR+ +QR E S
Subjt:  NNISSSQNEDVPSKGMESTRQRDQRSEAS

A0A5D3DEN2 Uncharacterized protein1.2e-1454.08Show/hide
Query:  SDFLGRPPGSLPSNTKMPNQAGGFGKEKCQAVTLRSGRNLTI--RDPETEPSNSTSHSNAEIGNSSNVPDLVHFPLTNNISSSQNEDVPSKGMESTRQ
        SD + +  G LPSNT+MPNQ GG  KEKCQ V L+SGRN T     P  E + STS    EI NSS+  + ++FPLTNN SS QN+ VP+K +E+TRQ
Subjt:  SDFLGRPPGSLPSNTKMPNQAGGFGKEKCQAVTLRSGRNLTI--RDPETEPSNSTSHSNAEIGNSSNVPDLVHFPLTNNISSSQNEDVPSKGMESTRQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAAAAATGATGCCCTTCTACAAAGTCAAGCTTCATCAATTCGCAATCTGGAAGTACAGTTAGGGCAGCTAGCCAGCGATTTCCTTGGAAGACCACCGGGATCCCT
CCCAAGTAATACAAAAATGCCAAATCAGGCGGGGGGATTCGGAAAAGAGAAGTGTCAAGCTGTGACACTACGCAGCGGAAGGAATCTGACCATCCGCGATCCTGAAACCG
AACCTAGCAACTCCACTTCTCATTCTAATGCCGAAATTGGAAACTCAAGTAACGTTCCTGATCTTGTACATTTCCCTTTAACTAACAATATTTCTTCCTCGCAGAATGAA
GACGTTCCAAGCAAGGGCATGGAAAGCACAAGGCAACGCGATCAACGAAGTGAAGCGTCTCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGAAAAATGATGCCCTTCTACAAAGTCAAGCTTCATCAATTCGCAATCTGGAAGTACAGTTAGGGCAGCTAGCCAGCGATTTCCTTGGAAGACCACCGGGATCCCT
CCCAAGTAATACAAAAATGCCAAATCAGGCGGGGGGATTCGGAAAAGAGAAGTGTCAAGCTGTGACACTACGCAGCGGAAGGAATCTGACCATCCGCGATCCTGAAACCG
AACCTAGCAACTCCACTTCTCATTCTAATGCCGAAATTGGAAACTCAAGTAACGTTCCTGATCTTGTACATTTCCCTTTAACTAACAATATTTCTTCCTCGCAGAATGAA
GACGTTCCAAGCAAGGGCATGGAAAGCACAAGGCAACGCGATCAACGAAGTGAAGCGTCTCAATAG
Protein sequenceShow/hide protein sequence
MQKNDALLQSQASSIRNLEVQLGQLASDFLGRPPGSLPSNTKMPNQAGGFGKEKCQAVTLRSGRNLTIRDPETEPSNSTSHSNAEIGNSSNVPDLVHFPLTNNISSSQNE
DVPSKGMESTRQRDQRSEASQ