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PI0016884 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016884
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr11:8893219..8897390
RNA-Seq ExpressionPI0016884
SyntenyPI0016884
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_012435389.1 PREDICTED: uncharacterized protein LOC105762011 [Gossypium raimondii]3.2e-0930.98Show/hide
Query:  ISDALLIQHLYEWLVFDDKSTIDAVARGALINNTPTELNQNPDATISYMQSLITHVSQ-LDSTVSRLYTRMGSFLHNPRRMCVTLVVANEWAKKYEVSFA
        IS+ LL+Q+ YE L   D+  IDA +  AL++ TP +            ++LI +++Q L ++VS  +T           MC TL    E    +    +
Subjt:  ISDALLIQHLYEWLVFDDKSTIDAVARGALINNTPTELNQNPDATISYMQSLITHVSQ-LDSTVSRLYTRMGSFLHNPRRMCVTLVVANEWAKKYEVSFA

Query:  LLPGKKSLSAKGKKIWVELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVVIDVDKQSL
        +  G +  S K   + ++L D S     G+++DVLV+V++L+F  DFY +++  +    ++ ++LGRPFLK  +  IDV K +L
Subjt:  LLPGKKSLSAKGKKIWVELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVVIDVDKQSL

XP_019172756.1 PREDICTED: uncharacterized protein LOC109168170 [Ipomoea nil]1.6e-0847.95Show/hide
Query:  SAKGKKIWVELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVVIDVDK
        S +G +I V+L D S V  +G+V+DVLV+V+ L+FP+DFYV+ +N  +      ++LGRPF+K  K  IDVDK
Subjt:  SAKGKKIWVELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVVIDVDK

XP_027081098.1 uncharacterized protein LOC113703816 [Coffea arabica]7.1e-0935.4Show/hide
Query:  KGKKIWVELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVVIDVDKQSLRTKQGRKSHTFIM------INDSSST
        K  ++ ++LTD S V   G+V+DVLV+V++ +FP DFY+V++N  +      ++LGR F+   ++ IDV + +L  K   K+ TF +      ++D+ S 
Subjt:  KGKKIWVELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVVIDVDKQSLRTKQGRKSHTFIM------INDSSST

Query:  NPICFSSSILQDN
        N  C ++SI+QD+
Subjt:  NPICFSSSILQDN

XP_038887084.1 uncharacterized protein LOC120077260 [Benincasa hispida]1.1e-0943.21Show/hide
Query:  IWVELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVVIDVDKQSLRTKQGRKSHTF
        + ++L D S ++ LG+V+DVL++V DL+FP+DFY++ ++  S P   +++LGRPF+K  K  IDVDK  L  K   K  +F
Subjt:  IWVELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVVIDVDKQSLRTKQGRKSHTF

XP_038890303.1 uncharacterized protein LOC120079919 [Benincasa hispida]1.0e-2033.93Show/hide
Query:  WLVFDDKSTIDAVARGALINNTPTELNQNPDATISYMQSLITHVSQLDSTVSRLYTRMGSFLHNPRRMCVTLVVANEWAKKYEVSFALLPGKKSLSAKGK
        W ++D     +  ARG ++ N    LN+  +   + ++ +++     +  +S +      + ++ R    + V   E+     V F +  G +++  K  
Subjt:  WLVFDDKSTIDAVARGALINNTPTELNQNPDATISYMQSLITHVSQLDSTVSRLYTRMGSFLHNPRRMCVTLVVANEWAKKYEVSFALLPGKKSLSAKGK

Query:  KIWVELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVVIDVDKQSLRTKQGRKSHTFIMINDSSSTNPICFSSSI
            +L D SLVR LGLV+D+L+RV+ L F   FYV++VN  SPP  LSV+LGRPFL  TKVVI+VDK SL+ ++G K     + +   +T PIC S+  
Subjt:  KIWVELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVVIDVDKQSLRTKQGRKSHTFIMINDSSSTNPICFSSSI

Query:  LQDNSPPLKLGAEDVCSSLHDDYG
         QD+  P  LG  D  S + D YG
Subjt:  LQDNSPPLKLGAEDVCSSLHDDYG

TrEMBL top hitse value%identityAlignment
A0A392NH73 Uncharacterized protein1.4e-0741.1Show/hide
Query:  VELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVVIDVDKQSLRTKQG
        + L D S++R  G+VKDV+V+V+ LLFP+DF +V++   +   ++ ++LGRPFL  ++ VID++K+ L+ + G
Subjt:  VELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVVIDVDKQSLRTKQG

A0A6P6T0V8 uncharacterized protein LOC1136964564.9e-0834.51Show/hide
Query:  KGKKIWVELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVVIDVDKQSLRTKQGRKSHTFIMIN------DSSST
        K  +I ++L D S V   GLV++VLV+V++ +FP+DFY+V++N         ++LGRPF+  T+  IDV + +L  +   ++ TF + +      D+ S 
Subjt:  KGKKIWVELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVVIDVDKQSLRTKQGRKSHTFIMIN------DSSST

Query:  NPICFSSSILQDN
        N +  +++ILQ+N
Subjt:  NPICFSSSILQDN

A0A6P6TRI6 uncharacterized protein LOC1137038163.4e-0935.4Show/hide
Query:  KGKKIWVELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVVIDVDKQSLRTKQGRKSHTFIM------INDSSST
        K  ++ ++LTD S V   G+V+DVLV+V++ +FP DFY+V++N  +      ++LGR F+   ++ IDV + +L  K   K+ TF +      ++D+ S 
Subjt:  KGKKIWVELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVVIDVDKQSLRTKQGRKSHTFIM------INDSSST

Query:  NPICFSSSILQDN
        N  C ++SI+QD+
Subjt:  NPICFSSSILQDN

A0A6P6WYZ4 uncharacterized protein LOC1137359521.4e-0732.74Show/hide
Query:  KGKKIWVELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVVIDVDKQSLRTKQGRKSHTFIMIN------DSSST
        K  ++ ++L D S V   GLV+DVLV+V++ +FP+DFY+V++N +     + ++LGRPF+   +  IDV + +L  +   +  TF + +      D+ S 
Subjt:  KGKKIWVELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVVIDVDKQSLRTKQGRKSHTFIMIN------DSSST

Query:  NPICFSSSILQDN
        N +  +++I+Q+N
Subjt:  NPICFSSSILQDN

A0A6S7NPW3 Uncharacterized protein1.1e-0749.21Show/hide
Query:  VELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVVIDV
        ++L D SLV   G+++DVLV+VD+ +FP DFYV+++     P   S++LGRPFLK +K  IDV
Subjt:  VELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVVIDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAAAGCTTTGAGTAATTCGAAGGTAGAATTTGGTGTTGATATTGATTTGGAGCTTAATTGTGCAACTCGAAGTCAAGTGGCATCAACCCGGGGCTTATGTATGAA
GAAAAAGAAGCTAATTAGCTTCTGTCCTACAGTACAGCAGCGCTGTAGCACAGAATGGTTGAATTCTGCGAAAAGGCCATGGCACCGCAATACTGCCTGGAACGTCACGA
CGCTCCGAACTCCATACACGTGTAAACAGCTTATCTTGATGGTTAATGTTTTCGAACACTCCCTCATCATCCGACATGTGGATGTGAGGCTAAGGATCTGTGACCACCTA
GGCTCCGATGAAGAAGCTTTTCCTAGAAAGTTTTTTCCAGAGGCATCGCCAAAATTAGAAAAGAGATTTATGATATCTGATGCACTCCTGATTCAACACTTGTATGAGTG
GCTAGTCTTCGATGATAAAAGTACGATTGATGCAGTTGCGAGAGGAGCCTTGATTAACAACACTCCTACAGAGTTGAACCAAAATCCAGATGCCACAATCTCCTATATGC
AAAGTTTGATTACACATGTGTCCCAGTTGGACAGCACAGTAAGTAGACTTTACACCCGTATGGGAAGCTTCCTTCACAACCCGCGTCGAATGTGTGTAACGTTAGTTGTT
GCTAACGAATGGGCAAAGAAGTACGAGGTGAGTTTTGCCCTATTGCCAGGTAAGAAAAGCCTTTCTGCTAAGGGTAAGAAAATTTGGGTTGAATTAACTGATCTCTCCTT
AGTTAGGCATCTAGGTTTGGTTAAGGATGTCTTGGTTAGAGTTGATGACCTATTGTTTCCTATGGATTTTTATGTGGTGAATGTGAATACTTCCTCCCCTCCCTTTGAGT
TATCTGTTATGCTAGGGAGACCCTTCTTAAAGGCAACAAAAGTTGTAATAGATGTGGATAAACAGTCTCTTAGGACCAAACAAGGAAGGAAATCTCACACTTTTATAATG
ATCAATGACAGTTCTTCTACTAATCCTATATGTTTTAGTTCTTCTATTTTACAGGATAATAGCCCACCTCTTAAGTTAGGGGCGGAGGATGTTTGCTCTAGTCTTCATGA
TGATTATGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCAAAGCTTTGAGTAATTCGAAGGTAGAATTTGGTGTTGATATTGATTTGGAGCTTAATTGTGCAACTCGAAGTCAAGTGGCATCAACCCGGGGCTTATGTATGAA
GAAAAAGAAGCTAATTAGCTTCTGTCCTACAGTACAGCAGCGCTGTAGCACAGAATGGTTGAATTCTGCGAAAAGGCCATGGCACCGCAATACTGCCTGGAACGTCACGA
CGCTCCGAACTCCATACACGTGTAAACAGCTTATCTTGATGGTTAATGTTTTCGAACACTCCCTCATCATCCGACATGTGGATGTGAGGCTAAGGATCTGTGACCACCTA
GGCTCCGATGAAGAAGCTTTTCCTAGAAAGTTTTTTCCAGAGGCATCGCCAAAATTAGAAAAGAGATTTATGATATCTGATGCACTCCTGATTCAACACTTGTATGAGTG
GCTAGTCTTCGATGATAAAAGTACGATTGATGCAGTTGCGAGAGGAGCCTTGATTAACAACACTCCTACAGAGTTGAACCAAAATCCAGATGCCACAATCTCCTATATGC
AAAGTTTGATTACACATGTGTCCCAGTTGGACAGCACAGTAAGTAGACTTTACACCCGTATGGGAAGCTTCCTTCACAACCCGCGTCGAATGTGTGTAACGTTAGTTGTT
GCTAACGAATGGGCAAAGAAGTACGAGGTGAGTTTTGCCCTATTGCCAGGTAAGAAAAGCCTTTCTGCTAAGGGTAAGAAAATTTGGGTTGAATTAACTGATCTCTCCTT
AGTTAGGCATCTAGGTTTGGTTAAGGATGTCTTGGTTAGAGTTGATGACCTATTGTTTCCTATGGATTTTTATGTGGTGAATGTGAATACTTCCTCCCCTCCCTTTGAGT
TATCTGTTATGCTAGGGAGACCCTTCTTAAAGGCAACAAAAGTTGTAATAGATGTGGATAAACAGTCTCTTAGGACCAAACAAGGAAGGAAATCTCACACTTTTATAATG
ATCAATGACAGTTCTTCTACTAATCCTATATGTTTTAGTTCTTCTATTTTACAGGATAATAGCCCACCTCTTAAGTTAGGGGCGGAGGATGTTTGCTCTAGTCTTCATGA
TGATTATGGTTGA
Protein sequenceShow/hide protein sequence
MFKALSNSKVEFGVDIDLELNCATRSQVASTRGLCMKKKKLISFCPTVQQRCSTEWLNSAKRPWHRNTAWNVTTLRTPYTCKQLILMVNVFEHSLIIRHVDVRLRICDHL
GSDEEAFPRKFFPEASPKLEKRFMISDALLIQHLYEWLVFDDKSTIDAVARGALINNTPTELNQNPDATISYMQSLITHVSQLDSTVSRLYTRMGSFLHNPRRMCVTLVV
ANEWAKKYEVSFALLPGKKSLSAKGKKIWVELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVVIDVDKQSLRTKQGRKSHTFIM
INDSSSTNPICFSSSILQDNSPPLKLGAEDVCSSLHDDYG