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PI0016886 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016886
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr09:15630383..15630754
RNA-Seq ExpressionPI0016886
SyntenyPI0016886
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041444.1 retrotransposon protein [Cucumis melo var. makuwa]4.7e-2652.46Show/hide
Query:  MSLEDILGTRPDLSSECRTGSSRLKRKYGGHNVETVEVIRNVMEYANDQLKAIAEWPKEQREDENTTRATVVSQLQGIPKLSRLDRVHCMRILMRNVVDM
        MS +D++GTR     E R  SS  KRK  GH+ ++ ++IR ++EY N+QL  IAEWP  QR+D + TR  VV QL+ IP+L+ +DR   MRILMRNV DM
Subjt:  MSLEDILGTRPDLSSECRTGSSRLKRKYGGHNVETVEVIRNVMEYANDQLKAIAEWPKEQREDENTTRATVVSQLQGIPKLSRLDRVHCMRILMRNVVDM

Query:  KAFLEVPDELKLDYCMVILQDN
        KAFL+VP+ +K  YC +ILQ+N
Subjt:  KAFLEVPDELKLDYCMVILQDN

KAA0046363.1 retrotransposon protein [Cucumis melo var. makuwa]1.8e-2552.46Show/hide
Query:  MSLEDILGTRPDLSSECRTGSSRLKRKYGGHNVETVEVIRNVMEYANDQLKAIAEWPKEQREDENTTRATVVSQLQGIPKLSRLDRVHCMRILMRNVVDM
        MS +D++ TR    SE R  SSR KRK  GH  ++ +++R  +EY N+QL  IAEWP  QR+D   TR  +V QL+ IP+L+ +DR   MRILMRNV D+
Subjt:  MSLEDILGTRPDLSSECRTGSSRLKRKYGGHNVETVEVIRNVMEYANDQLKAIAEWPKEQREDENTTRATVVSQLQGIPKLSRLDRVHCMRILMRNVVDM

Query:  KAFLEVPDELKLDYCMVILQDN
        KAFLEVPD +K  YC +ILQ+N
Subjt:  KAFLEVPDELKLDYCMVILQDN

KAA0055439.1 retrotransposon protein [Cucumis melo var. makuwa]2.1e-2652.46Show/hide
Query:  MSLEDILGTRPDLSSECRTGSSRLKRKYGGHNVETVEVIRNVMEYANDQLKAIAEWPKEQREDENTTRATVVSQLQGIPKLSRLDRVHCMRILMRNVVDM
        MSL+D++GTR     E +  SS  KRK  GH+V++ ++IR  +EY N+QL  I EWP  Q +D + TR  VV QL+ IP+L+ +DR H MRILM NV DM
Subjt:  MSLEDILGTRPDLSSECRTGSSRLKRKYGGHNVETVEVIRNVMEYANDQLKAIAEWPKEQREDENTTRATVVSQLQGIPKLSRLDRVHCMRILMRNVVDM

Query:  KAFLEVPDELKLDYCMVILQDN
        KAFL+VPD +K  YC +ILQ+N
Subjt:  KAFLEVPDELKLDYCMVILQDN

KAA0060529.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-3364.23Show/hide
Query:  MSLEDILGTRPDLSSECRTGSSRLKRKYGGHNVETVEVIRNVMEYANDQLKAIAEWPKEQREDENTTRATVVSQLQGIPKLSRLDRVHCMRILMRNVVDM
        M  +DI+GTRPD S+E RTGSS  KRK GG  VET+E+IRNVME++ND+LKAI EW   QR+D +     VV QLQ IP+LSR DRV  M+ILM NV DM
Subjt:  MSLEDILGTRPDLSSECRTGSSRLKRKYGGHNVETVEVIRNVMEYANDQLKAIAEWPKEQREDENTTRATVVSQLQGIPKLSRLDRVHCMRILMRNVVDM

Query:  KAFLEVPDELKLDYCMVILQDNA
        KAFL++ DELKLDYC +I QDNA
Subjt:  KAFLEVPDELKLDYCMVILQDNA

KAA0065737.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-2552.46Show/hide
Query:  MSLEDILGTRPDLSSECRTGSSRLKRKYGGHNVETVEVIRNVMEYANDQLKAIAEWPKEQREDENTTRATVVSQLQGIPKLSRLDRVHCMRILMRNVVDM
        MS +D++ TR    SE R  SS  KRK  GH  ++ +++R  +EY N+QL  IAEWP  QR+D   TR  +V QL+ IP+L+ +DR   MRILMRNV DM
Subjt:  MSLEDILGTRPDLSSECRTGSSRLKRKYGGHNVETVEVIRNVMEYANDQLKAIAEWPKEQREDENTTRATVVSQLQGIPKLSRLDRVHCMRILMRNVVDM

Query:  KAFLEVPDELKLDYCMVILQDN
        KAFLEVPD +K  YC +ILQ+N
Subjt:  KAFLEVPDELKLDYCMVILQDN

TrEMBL top hitse value%identityAlignment
A0A5A7SWD8 Retrotransposon protein8.7e-2652.46Show/hide
Query:  MSLEDILGTRPDLSSECRTGSSRLKRKYGGHNVETVEVIRNVMEYANDQLKAIAEWPKEQREDENTTRATVVSQLQGIPKLSRLDRVHCMRILMRNVVDM
        MS +D++ TR    SE R  SS  KRK  GH  ++ +++R  +EY N+QL  IAEWP  QR+D   TR  +V QL+ IP+L+ +DR   MRILMRNV DM
Subjt:  MSLEDILGTRPDLSSECRTGSSRLKRKYGGHNVETVEVIRNVMEYANDQLKAIAEWPKEQREDENTTRATVVSQLQGIPKLSRLDRVHCMRILMRNVVDM

Query:  KAFLEVPDELKLDYCMVILQDN
        KAFLEVPD +K  YC +ILQ+N
Subjt:  KAFLEVPDELKLDYCMVILQDN

A0A5A7TDD6 Retrotransposon protein2.3e-2652.46Show/hide
Query:  MSLEDILGTRPDLSSECRTGSSRLKRKYGGHNVETVEVIRNVMEYANDQLKAIAEWPKEQREDENTTRATVVSQLQGIPKLSRLDRVHCMRILMRNVVDM
        MS +D++GTR     E R  SS  KRK  GH+ ++ ++IR ++EY N+QL  IAEWP  QR+D + TR  VV QL+ IP+L+ +DR   MRILMRNV DM
Subjt:  MSLEDILGTRPDLSSECRTGSSRLKRKYGGHNVETVEVIRNVMEYANDQLKAIAEWPKEQREDENTTRATVVSQLQGIPKLSRLDRVHCMRILMRNVVDM

Query:  KAFLEVPDELKLDYCMVILQDN
        KAFL+VP+ +K  YC +ILQ+N
Subjt:  KAFLEVPDELKLDYCMVILQDN

A0A5A7UPP6 Retrotransposon protein1.0e-2652.46Show/hide
Query:  MSLEDILGTRPDLSSECRTGSSRLKRKYGGHNVETVEVIRNVMEYANDQLKAIAEWPKEQREDENTTRATVVSQLQGIPKLSRLDRVHCMRILMRNVVDM
        MSL+D++GTR     E +  SS  KRK  GH+V++ ++IR  +EY N+QL  I EWP  Q +D + TR  VV QL+ IP+L+ +DR H MRILM NV DM
Subjt:  MSLEDILGTRPDLSSECRTGSSRLKRKYGGHNVETVEVIRNVMEYANDQLKAIAEWPKEQREDENTTRATVVSQLQGIPKLSRLDRVHCMRILMRNVVDM

Query:  KAFLEVPDELKLDYCMVILQDN
        KAFL+VPD +K  YC +ILQ+N
Subjt:  KAFLEVPDELKLDYCMVILQDN

A0A5A7V469 Retrotransposon protein6.6e-3464.23Show/hide
Query:  MSLEDILGTRPDLSSECRTGSSRLKRKYGGHNVETVEVIRNVMEYANDQLKAIAEWPKEQREDENTTRATVVSQLQGIPKLSRLDRVHCMRILMRNVVDM
        M  +DI+GTRPD S+E RTGSS  KRK GG  VET+E+IRNVME++ND+LKAI EW   QR+D +     VV QLQ IP+LSR DRV  M+ILM NV DM
Subjt:  MSLEDILGTRPDLSSECRTGSSRLKRKYGGHNVETVEVIRNVMEYANDQLKAIAEWPKEQREDENTTRATVVSQLQGIPKLSRLDRVHCMRILMRNVVDM

Query:  KAFLEVPDELKLDYCMVILQDNA
        KAFL++ DELKLDYC +I QDNA
Subjt:  KAFLEVPDELKLDYCMVILQDNA

A0A5A7VF53 Retrotransposon protein6.6e-2652.46Show/hide
Query:  MSLEDILGTRPDLSSECRTGSSRLKRKYGGHNVETVEVIRNVMEYANDQLKAIAEWPKEQREDENTTRATVVSQLQGIPKLSRLDRVHCMRILMRNVVDM
        MS +D++ TR    SE R  SS  KRK  GH  ++ +++R  +EY N+QL  IAEWP  QR+D   TR  +V QL+ IP+L+ +DR   MRILMRNV DM
Subjt:  MSLEDILGTRPDLSSECRTGSSRLKRKYGGHNVETVEVIRNVMEYANDQLKAIAEWPKEQREDENTTRATVVSQLQGIPKLSRLDRVHCMRILMRNVVDM

Query:  KAFLEVPDELKLDYCMVILQDN
        KAFLEVPD +K  YC +ILQ+N
Subjt:  KAFLEVPDELKLDYCMVILQDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACTCGAGGACATACTGGGAACACGACCTGATCTGTCGAGTGAGTGTAGGACGGGTTCAAGCAGATTAAAGAGGAAGTATGGAGGCCATAATGTGGAAACTGTGGA
AGTCATTCGCAACGTCATGGAATATGCCAATGACCAGCTCAAGGCAATTGCAGAATGGCCGAAGGAACAACGGGAAGACGAAAATACAACCCGTGCGACAGTCGTTAGTC
AATTACAGGGAATCCCTAAACTATCAAGACTCGATAGGGTGCACTGTATGCGGATACTTATGCGAAACGTGGTTGATATGAAAGCGTTCTTGGAGGTACCCGACGAGCTT
AAGTTGGACTACTGTATGGTCATTCTGCAAGATAACGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCACTCGAGGACATACTGGGAACACGACCTGATCTGTCGAGTGAGTGTAGGACGGGTTCAAGCAGATTAAAGAGGAAGTATGGAGGCCATAATGTGGAAACTGTGGA
AGTCATTCGCAACGTCATGGAATATGCCAATGACCAGCTCAAGGCAATTGCAGAATGGCCGAAGGAACAACGGGAAGACGAAAATACAACCCGTGCGACAGTCGTTAGTC
AATTACAGGGAATCCCTAAACTATCAAGACTCGATAGGGTGCACTGTATGCGGATACTTATGCGAAACGTGGTTGATATGAAAGCGTTCTTGGAGGTACCCGACGAGCTT
AAGTTGGACTACTGTATGGTCATTCTGCAAGATAACGCTTGA
Protein sequenceShow/hide protein sequence
MSLEDILGTRPDLSSECRTGSSRLKRKYGGHNVETVEVIRNVMEYANDQLKAIAEWPKEQREDENTTRATVVSQLQGIPKLSRLDRVHCMRILMRNVVDMKAFLEVPDEL
KLDYCMVILQDNA