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PI0016901 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016901
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr01:14658179..14658742
RNA-Seq ExpressionPI0016901
SyntenyPI0016901
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026071.1 uncharacterized protein E6C27_scaffold581G00620 [Cucumis melo var. makuwa]3.4e-7674.59Show/hide
Query:  FGDTWSYSCSYSRSGVGRIWVMWKKDRFDFTPSVVDEQFVSGVLSYLHSGVTVEVLCVYASNSNMDRRVPWRRLVEITSSWSSPGVVMGDFNAIRVHSEA
        F ++W YSCSYS SGVGRIWVMWKK+RF F+  V+DEQFV+G L+ L SGV VEV CVYASNSN++RR+ W RLVEITS+WSSPGVVM DFNAIRVHSEA
Subjt:  FGDTWSYSCSYSRSGVGRIWVMWKKDRFDFTPSVVDEQFVSGVLSYLHSGVTVEVLCVYASNSNMDRRVPWRRLVEITSSWSSPGVVMGDFNAIRVHSEA

Query:  CRGSPVTGDMEEFDLAIRDADLVEPTVQGNWFTWTSKVRGSGWFRWLDRILVNEQGLMAWPTLHVTVLPWGISDHSPILFY
         RGSP+ G+ME+F+LAIRDADLVEP+VQGNWFTWTSKV+GSG  R LDR+LVN+  L  WPT+ V VLPWGISDH PILFY
Subjt:  CRGSPVTGDMEEFDLAIRDADLVEPTVQGNWFTWTSKVRGSGWFRWLDRILVNEQGLMAWPTLHVTVLPWGISDHSPILFY

KAA0046851.1 uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]1.7e-7274.43Show/hide
Query:  SYSCSYSRSGVGRIWVMWKKDRFDFTPSVVDEQFVSGVLSYLHSGVTVEVLCVYASNSNMDRRVPWRRLVEITSSWSSPGVVMGDFNAIRVHSEACRGSP
        +YSCSYS SGVGRIWVMWKK RF F   V+DE+FV G L+ L  GV VEV+CVYASNS+ +RR  WR L EITS+WSS GVVMGDFNAIRVHSEA  GSP
Subjt:  SYSCSYSRSGVGRIWVMWKKDRFDFTPSVVDEQFVSGVLSYLHSGVTVEVLCVYASNSNMDRRVPWRRLVEITSSWSSPGVVMGDFNAIRVHSEACRGSP

Query:  VTGDMEEFDLAIRDADLVEPTVQGNWFTWTSKVRGSGWFRWLDRILVNEQGLMAWPTLHVTVLPWGISDHSPILFY
        + G+MEEFDLAIRDADLVEP+VQGNWFTWTSKV+GSG  R LDR+LVN++ L AWPT+ + VLPWGISDHSPILFY
Subjt:  VTGDMEEFDLAIRDADLVEPTVQGNWFTWTSKVRGSGWFRWLDRILVNEQGLMAWPTLHVTVLPWGISDHSPILFY

KAA0059841.1 reverse transcriptase [Cucumis melo var. makuwa]1.5e-7176.02Show/hide
Query:  YSRSGVGRIWVMWKKDRFDFTPSVVDEQFVSGVLSYLHSGVTVEVLCVYASNSNMDRRVPWRRLVEITSSWSSPGVVMGDFNAIRVHSEACRGSPVTGDM
        YS SGVG+IWVMWKK+RF F+  VVDEQFV+G L+ L  GV VEV CVYASNSN++RR+ W RLVE TS+WSSPGVVMGDFNAIRVHSEA  GSP+ G+M
Subjt:  YSRSGVGRIWVMWKKDRFDFTPSVVDEQFVSGVLSYLHSGVTVEVLCVYASNSNMDRRVPWRRLVEITSSWSSPGVVMGDFNAIRVHSEACRGSPVTGDM

Query:  EEFDLAIRDADLVEPTVQGNWFTWTSKVRGSGWFRWLDRILVNEQGLMAWPTLHVTVLPWGISDHSPILFY
        E+FDLAIRDADLVEP+VQGNWFTWTSKV GSG  R LDR+LVN+  L AWPT+ V VLPWGISDHSPILFY
Subjt:  EEFDLAIRDADLVEPTVQGNWFTWTSKVRGSGWFRWLDRILVNEQGLMAWPTLHVTVLPWGISDHSPILFY

TYK28099.1 uncharacterized protein E5676_scaffold1467G00020 [Cucumis melo var. makuwa]3.4e-7674.59Show/hide
Query:  FGDTWSYSCSYSRSGVGRIWVMWKKDRFDFTPSVVDEQFVSGVLSYLHSGVTVEVLCVYASNSNMDRRVPWRRLVEITSSWSSPGVVMGDFNAIRVHSEA
        F ++W YSCSYS SGVGRIWVMWKK+RF F+  V+DEQFV+G L+ L SGV VEV CVYASNSN++RR+ W RLVEITS+WSSPGVVM DFNAIRVHSEA
Subjt:  FGDTWSYSCSYSRSGVGRIWVMWKKDRFDFTPSVVDEQFVSGVLSYLHSGVTVEVLCVYASNSNMDRRVPWRRLVEITSSWSSPGVVMGDFNAIRVHSEA

Query:  CRGSPVTGDMEEFDLAIRDADLVEPTVQGNWFTWTSKVRGSGWFRWLDRILVNEQGLMAWPTLHVTVLPWGISDHSPILFY
         RGSP+ G+ME+F+LAIRDADLVEP+VQGNWFTWTSKV+GSG  R LDR+LVN+  L  WPT+ V VLPWGISDH PILFY
Subjt:  CRGSPVTGDMEEFDLAIRDADLVEPTVQGNWFTWTSKVRGSGWFRWLDRILVNEQGLMAWPTLHVTVLPWGISDHSPILFY

XP_008466769.1 PREDICTED: uncharacterized protein LOC103504100 [Cucumis melo]1.5e-7176.02Show/hide
Query:  YSRSGVGRIWVMWKKDRFDFTPSVVDEQFVSGVLSYLHSGVTVEVLCVYASNSNMDRRVPWRRLVEITSSWSSPGVVMGDFNAIRVHSEACRGSPVTGDM
        YS SGVG+IWVMWKK+RF F+  VVDEQFV+G L+ L  GV VEV CVYASNSN++RR+ W RLVE TS+WSSPGVVMGDFNAIRVHSEA  GSP+ G+M
Subjt:  YSRSGVGRIWVMWKKDRFDFTPSVVDEQFVSGVLSYLHSGVTVEVLCVYASNSNMDRRVPWRRLVEITSSWSSPGVVMGDFNAIRVHSEACRGSPVTGDM

Query:  EEFDLAIRDADLVEPTVQGNWFTWTSKVRGSGWFRWLDRILVNEQGLMAWPTLHVTVLPWGISDHSPILFY
        E+FDLAIRDADLVEP+VQGNWFTWTSKV GSG  R LDR+LVN+  L AWPT+ V VLPWGISDHSPILFY
Subjt:  EEFDLAIRDADLVEPTVQGNWFTWTSKVRGSGWFRWLDRILVNEQGLMAWPTLHVTVLPWGISDHSPILFY

TrEMBL top hitse value%identityAlignment
A0A1S3CRZ6 uncharacterized protein LOC1035041007.1e-7276.02Show/hide
Query:  YSRSGVGRIWVMWKKDRFDFTPSVVDEQFVSGVLSYLHSGVTVEVLCVYASNSNMDRRVPWRRLVEITSSWSSPGVVMGDFNAIRVHSEACRGSPVTGDM
        YS SGVG+IWVMWKK+RF F+  VVDEQFV+G L+ L  GV VEV CVYASNSN++RR+ W RLVE TS+WSSPGVVMGDFNAIRVHSEA  GSP+ G+M
Subjt:  YSRSGVGRIWVMWKKDRFDFTPSVVDEQFVSGVLSYLHSGVTVEVLCVYASNSNMDRRVPWRRLVEITSSWSSPGVVMGDFNAIRVHSEACRGSPVTGDM

Query:  EEFDLAIRDADLVEPTVQGNWFTWTSKVRGSGWFRWLDRILVNEQGLMAWPTLHVTVLPWGISDHSPILFY
        E+FDLAIRDADLVEP+VQGNWFTWTSKV GSG  R LDR+LVN+  L AWPT+ V VLPWGISDHSPILFY
Subjt:  EEFDLAIRDADLVEPTVQGNWFTWTSKVRGSGWFRWLDRILVNEQGLMAWPTLHVTVLPWGISDHSPILFY

A0A5A7SPE5 Reverse transcriptase domain-containing protein1.6e-7674.59Show/hide
Query:  FGDTWSYSCSYSRSGVGRIWVMWKKDRFDFTPSVVDEQFVSGVLSYLHSGVTVEVLCVYASNSNMDRRVPWRRLVEITSSWSSPGVVMGDFNAIRVHSEA
        F ++W YSCSYS SGVGRIWVMWKK+RF F+  V+DEQFV+G L+ L SGV VEV CVYASNSN++RR+ W RLVEITS+WSSPGVVM DFNAIRVHSEA
Subjt:  FGDTWSYSCSYSRSGVGRIWVMWKKDRFDFTPSVVDEQFVSGVLSYLHSGVTVEVLCVYASNSNMDRRVPWRRLVEITSSWSSPGVVMGDFNAIRVHSEA

Query:  CRGSPVTGDMEEFDLAIRDADLVEPTVQGNWFTWTSKVRGSGWFRWLDRILVNEQGLMAWPTLHVTVLPWGISDHSPILFY
         RGSP+ G+ME+F+LAIRDADLVEP+VQGNWFTWTSKV+GSG  R LDR+LVN+  L  WPT+ V VLPWGISDH PILFY
Subjt:  CRGSPVTGDMEEFDLAIRDADLVEPTVQGNWFTWTSKVRGSGWFRWLDRILVNEQGLMAWPTLHVTVLPWGISDHSPILFY

A0A5A7TZS0 Reverse transcriptase domain-containing protein8.4e-7374.43Show/hide
Query:  SYSCSYSRSGVGRIWVMWKKDRFDFTPSVVDEQFVSGVLSYLHSGVTVEVLCVYASNSNMDRRVPWRRLVEITSSWSSPGVVMGDFNAIRVHSEACRGSP
        +YSCSYS SGVGRIWVMWKK RF F   V+DE+FV G L+ L  GV VEV+CVYASNS+ +RR  WR L EITS+WSS GVVMGDFNAIRVHSEA  GSP
Subjt:  SYSCSYSRSGVGRIWVMWKKDRFDFTPSVVDEQFVSGVLSYLHSGVTVEVLCVYASNSNMDRRVPWRRLVEITSSWSSPGVVMGDFNAIRVHSEACRGSP

Query:  VTGDMEEFDLAIRDADLVEPTVQGNWFTWTSKVRGSGWFRWLDRILVNEQGLMAWPTLHVTVLPWGISDHSPILFY
        + G+MEEFDLAIRDADLVEP+VQGNWFTWTSKV+GSG  R LDR+LVN++ L AWPT+ + VLPWGISDHSPILFY
Subjt:  VTGDMEEFDLAIRDADLVEPTVQGNWFTWTSKVRGSGWFRWLDRILVNEQGLMAWPTLHVTVLPWGISDHSPILFY

A0A5A7V275 Reverse transcriptase7.1e-7276.02Show/hide
Query:  YSRSGVGRIWVMWKKDRFDFTPSVVDEQFVSGVLSYLHSGVTVEVLCVYASNSNMDRRVPWRRLVEITSSWSSPGVVMGDFNAIRVHSEACRGSPVTGDM
        YS SGVG+IWVMWKK+RF F+  VVDEQFV+G L+ L  GV VEV CVYASNSN++RR+ W RLVE TS+WSSPGVVMGDFNAIRVHSEA  GSP+ G+M
Subjt:  YSRSGVGRIWVMWKKDRFDFTPSVVDEQFVSGVLSYLHSGVTVEVLCVYASNSNMDRRVPWRRLVEITSSWSSPGVVMGDFNAIRVHSEACRGSPVTGDM

Query:  EEFDLAIRDADLVEPTVQGNWFTWTSKVRGSGWFRWLDRILVNEQGLMAWPTLHVTVLPWGISDHSPILFY
        E+FDLAIRDADLVEP+VQGNWFTWTSKV GSG  R LDR+LVN+  L AWPT+ V VLPWGISDHSPILFY
Subjt:  EEFDLAIRDADLVEPTVQGNWFTWTSKVRGSGWFRWLDRILVNEQGLMAWPTLHVTVLPWGISDHSPILFY

A0A5D3DXE4 Reverse transcriptase domain-containing protein1.6e-7674.59Show/hide
Query:  FGDTWSYSCSYSRSGVGRIWVMWKKDRFDFTPSVVDEQFVSGVLSYLHSGVTVEVLCVYASNSNMDRRVPWRRLVEITSSWSSPGVVMGDFNAIRVHSEA
        F ++W YSCSYS SGVGRIWVMWKK+RF F+  V+DEQFV+G L+ L SGV VEV CVYASNSN++RR+ W RLVEITS+WSSPGVVM DFNAIRVHSEA
Subjt:  FGDTWSYSCSYSRSGVGRIWVMWKKDRFDFTPSVVDEQFVSGVLSYLHSGVTVEVLCVYASNSNMDRRVPWRRLVEITSSWSSPGVVMGDFNAIRVHSEA

Query:  CRGSPVTGDMEEFDLAIRDADLVEPTVQGNWFTWTSKVRGSGWFRWLDRILVNEQGLMAWPTLHVTVLPWGISDHSPILFY
         RGSP+ G+ME+F+LAIRDADLVEP+VQGNWFTWTSKV+GSG  R LDR+LVN+  L  WPT+ V VLPWGISDH PILFY
Subjt:  CRGSPVTGDMEEFDLAIRDADLVEPTVQGNWFTWTSKVRGSGWFRWLDRILVNEQGLMAWPTLHVTVLPWGISDHSPILFY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGGGGACACTTGGAGTTACTCTTGTAGCTATAGCAGAAGTGGTGTGGGTCGGATTTGGGTGATGTGGAAGAAGGATAGGTTTGATTTTACTCCTAGCGTGGTGGA
TGAGCAGTTTGTTTCAGGTGTGCTTTCTTATTTGCATTCTGGTGTGACTGTGGAGGTGTTATGTGTTTATGCCTCTAATAGTAATATGGACCGTCGTGTGCCTTGGCGTC
GGTTAGTTGAGATCACTTCTAGTTGGTCAAGTCCAGGTGTGGTTATGGGAGATTTTAATGCAATTCGAGTGCACTCTGAAGCTTGTCGTGGGAGTCCGGTTACTGGTGAT
ATGGAGGAGTTTGATCTTGCTATTCGTGATGCTGACTTGGTTGAGCCAACTGTTCAGGGAAACTGGTTCACTTGGACTAGCAAGGTGCGAGGTTCAGGTTGGTTCCGTTG
GCTTGATCGTATTTTGGTTAATGAGCAAGGGTTAATGGCTTGGCCTACTCTACATGTTACTGTTTTGCCTTGGGGAATTTCAGACCATTCCCCTATTTTATTCTATCTTG
GTGTTGAGCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTGGGGACACTTGGAGTTACTCTTGTAGCTATAGCAGAAGTGGTGTGGGTCGGATTTGGGTGATGTGGAAGAAGGATAGGTTTGATTTTACTCCTAGCGTGGTGGA
TGAGCAGTTTGTTTCAGGTGTGCTTTCTTATTTGCATTCTGGTGTGACTGTGGAGGTGTTATGTGTTTATGCCTCTAATAGTAATATGGACCGTCGTGTGCCTTGGCGTC
GGTTAGTTGAGATCACTTCTAGTTGGTCAAGTCCAGGTGTGGTTATGGGAGATTTTAATGCAATTCGAGTGCACTCTGAAGCTTGTCGTGGGAGTCCGGTTACTGGTGAT
ATGGAGGAGTTTGATCTTGCTATTCGTGATGCTGACTTGGTTGAGCCAACTGTTCAGGGAAACTGGTTCACTTGGACTAGCAAGGTGCGAGGTTCAGGTTGGTTCCGTTG
GCTTGATCGTATTTTGGTTAATGAGCAAGGGTTAATGGCTTGGCCTACTCTACATGTTACTGTTTTGCCTTGGGGAATTTCAGACCATTCCCCTATTTTATTCTATCTTG
GTGTTGAGCAGTAG
Protein sequenceShow/hide protein sequence
MFGDTWSYSCSYSRSGVGRIWVMWKKDRFDFTPSVVDEQFVSGVLSYLHSGVTVEVLCVYASNSNMDRRVPWRRLVEITSSWSSPGVVMGDFNAIRVHSEACRGSPVTGD
MEEFDLAIRDADLVEPTVQGNWFTWTSKVRGSGWFRWLDRILVNEQGLMAWPTLHVTVLPWGISDHSPILFYLGVEQ