; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0016916 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016916
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr10:11707431..11708045
RNA-Seq ExpressionPI0016916
SyntenyPI0016916
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN56173.1 hypothetical protein Csa_010893 [Cucumis sativus]1.4e-1644.68Show/hide
Query:  MLKKKMDSNENL----------FGRARRRWDKRSESRGNYAGPFVKDVGRSNGNKSLKSQKSFDRRGDLDKNGSSIQRIKDKFGRCHEYDGFKHFHVECP
        +LKKK +S ENL          FGRA +RWDKR + RGNY  P+VK+VG S GNK                                    FKHFHV+CP
Subjt:  MLKKKMDSNENL----------FGRARRRWDKRSESRGNYAGPFVKDVGRSNGNKSLKSQKSFDRRGDLDKNGSSIQRIKDKFGRCHEYDGFKHFHVECP

Query:  NYLQKQRWGHSVTLSDEETQSSSDFDDEVRASIGKLVTNDT
        NYL+KQ   + V LSDEET S  D DDEV A I KLV +DT
Subjt:  NYLQKQRWGHSVTLSDEETQSSSDFDDEVRASIGKLVTNDT

TrEMBL top hitse value%identityAlignment
A0A0A0L327 Uncharacterized protein6.8e-1744.68Show/hide
Query:  MLKKKMDSNENL----------FGRARRRWDKRSESRGNYAGPFVKDVGRSNGNKSLKSQKSFDRRGDLDKNGSSIQRIKDKFGRCHEYDGFKHFHVECP
        +LKKK +S ENL          FGRA +RWDKR + RGNY  P+VK+VG S GNK                                    FKHFHV+CP
Subjt:  MLKKKMDSNENL----------FGRARRRWDKRSESRGNYAGPFVKDVGRSNGNKSLKSQKSFDRRGDLDKNGSSIQRIKDKFGRCHEYDGFKHFHVECP

Query:  NYLQKQRWGHSVTLSDEETQSSSDFDDEVRASIGKLVTNDT
        NYL+KQ   + V LSDEET S  D DDEV A I KLV +DT
Subjt:  NYLQKQRWGHSVTLSDEETQSSSDFDDEVRASIGKLVTNDT

A0A5A7TCY4 Uncharacterized protein8.6e-0439.74Show/hide
Query:  DRRGDLDKNGSSIQRIK-DKFGRCHEYDGFKHFHVECPNYLQKQRWGHSVTLSDEETQSSSDFDDEVRASIGKLVTND
        ++R + +K   S    K ++  RCHE++GF HF VECP +L+ ++   SVTLSD+ET S S   +E R ++   V  D
Subjt:  DRRGDLDKNGSSIQRIK-DKFGRCHEYDGFKHFHVECPNYLQKQRWGHSVTLSDEETQSSSDFDDEVRASIGKLVTND

A0A5A7UD40 Gag-pol polyprotein8.6e-0434.26Show/hide
Query:  SRGNYAGPFVKDVGRSNGNKSL---KSQKSFDRRGDLDKNGSSIQRIKDKFGRCHEYDGFKHFHVECPNYLQKQRWGHSVTLSDEETQSSSDFDDEVRAS
        S+  Y   F  +   SN + +L   +  +  DR     KN  S + I     RCHEYDGF+H+  EC  +L+ +R    VTLSD+E  S S+ +   RA 
Subjt:  SRGNYAGPFVKDVGRSNGNKSL---KSQKSFDRRGDLDKNGSSIQRIKDKFGRCHEYDGFKHFHVECPNYLQKQRWGHSVTLSDEETQSSSDFDDEVRAS

Query:  IGKLVTND
           L+ N+
Subjt:  IGKLVTND

A0A5D3C778 Gag-pol polyprotein5.0e-0447.62Show/hide
Query:  DKFG---RCHEYDGFKHFHVECPNYLQKQRWGHSVTLSDEETQSSSDFDDEVRASIGKLVTND
        DKFG   RCHE +GF H   EC  YL++++ G   TLSDEE  S SD +D   A I     ND
Subjt:  DKFG---RCHEYDGFKHFHVECPNYLQKQRWGHSVTLSDEETQSSSDFDDEVRASIGKLVTND

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAAAAAGAAGATGGATTCAAACGAGAATTTATTTGGAAGAGCTCGTAGGAGATGGGATAAGAGATCAGAGTCAAGAGGAAATTATGCTGGCCCTTTTGTCAAAGA
TGTTGGTAGGAGTAATGGGAACAAGTCACTCAAATCTCAAAAATCTTTTGATCGAAGAGGTGATCTCGATAAAAATGGAAGTAGCATCCAAAGGATTAAGGATAAGTTTG
GAAGATGTCATGAATATGATGGGTTCAAACACTTTCACGTTGAATGTCCTAACTACTTACAGAAACAACGATGGGGGCATTCTGTCACGTTATCTGATGAAGAGACTCAG
TCAAGTAGTGATTTCGATGATGAAGTTCGTGCCTCGATAGGCAAACTTGTTACAAATGATACACATCAAGCTCTGATTGTTGAAGAATTTGACTCTATCAAGGTTGGCTC
TACTGTTGTTCCTCTAAAGAAGAAAGTTTTTCTATTAAAGAAATTCGACAATTATAGTTGGATGACTAAAAAAATTCGATTGTCCAAAAGGAAAAGATCGAGAGACTTAT
TATTGATATTGTTGTCTGTTGAGTACTATTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAAAAAGAAGATGGATTCAAACGAGAATTTATTTGGAAGAGCTCGTAGGAGATGGGATAAGAGATCAGAGTCAAGAGGAAATTATGCTGGCCCTTTTGTCAAAGA
TGTTGGTAGGAGTAATGGGAACAAGTCACTCAAATCTCAAAAATCTTTTGATCGAAGAGGTGATCTCGATAAAAATGGAAGTAGCATCCAAAGGATTAAGGATAAGTTTG
GAAGATGTCATGAATATGATGGGTTCAAACACTTTCACGTTGAATGTCCTAACTACTTACAGAAACAACGATGGGGGCATTCTGTCACGTTATCTGATGAAGAGACTCAG
TCAAGTAGTGATTTCGATGATGAAGTTCGTGCCTCGATAGGCAAACTTGTTACAAATGATACACATCAAGCTCTGATTGTTGAAGAATTTGACTCTATCAAGGTTGGCTC
TACTGTTGTTCCTCTAAAGAAGAAAGTTTTTCTATTAAAGAAATTCGACAATTATAGTTGGATGACTAAAAAAATTCGATTGTCCAAAAGGAAAAGATCGAGAGACTTAT
TATTGATATTGTTGTCTGTTGAGTACTATTTCTAA
Protein sequenceShow/hide protein sequence
MLKKKMDSNENLFGRARRRWDKRSESRGNYAGPFVKDVGRSNGNKSLKSQKSFDRRGDLDKNGSSIQRIKDKFGRCHEYDGFKHFHVECPNYLQKQRWGHSVTLSDEETQ
SSSDFDDEVRASIGKLVTNDTHQALIVEEFDSIKVGSTVVPLKKKVFLLKKFDNYSWMTKKIRLSKRKRSRDLLLILLSVEYYF