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PI0016921 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016921
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionZinc finger, CCHC-type
Genome locationchr06:14367947..14368574
RNA-Seq ExpressionPI0016921
SyntenyPI0016921
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036753.1 hypothetical protein E6C27_scaffold20G00320 [Cucumis melo var. makuwa]3.0e-0769.57Show/hide
Query:  SSKEENEAHAEHSWKNFPNQTNQETIIMPQGPMTRAKAKRLQDGLN
        +S+EENE HA +SW+N  +QTNQE IIM QG MT+A+AKRLQDGLN
Subjt:  SSKEENEAHAEHSWKNFPNQTNQETIIMPQGPMTRAKAKRLQDGLN

KAA0065903.1 reverse transcriptase [Cucumis melo var. makuwa]8.0e-2159.26Show/hide
Query:  DKMLNNKTEYEVENEAQQAYTNSSKEENEAHAEHSWKNFPNQTNQETIIMPQGPMTRAKAKRLQDGLN----AKFLAFNDKLQQLKYQESFGHPKVIMNL
        DKMLNN           +AYTNS+KEENE HAE+SW N   QTNQETIIM QG MT+A+AKR +D LN    A+F  FN   ++L+ QES GHP++IMNL
Subjt:  DKMLNNKTEYEVENEAQQAYTNSSKEENEAHAEHSWKNFPNQTNQETIIMPQGPMTRAKAKRLQDGLN----AKFLAFNDKLQQLKYQESFGHPKVIMNL

Query:  EIQIHSHL
        EI+IHSHL
Subjt:  EIQIHSHL

TYK01059.1 hypothetical protein E5676_scaffold264G00730 [Cucumis melo var. makuwa]6.2e-0556Show/hide
Query:  QQAYTNSSKEENEAHAEHSWKNFPNQTNQETIIMPQGPMTRAKAKRLQDG
        ++A+ NS++E+NEAHA + ++NF  QTNQ  +I  QG MT+A+AKRLQDG
Subjt:  QQAYTNSSKEENEAHAEHSWKNFPNQTNQETIIMPQGPMTRAKAKRLQDG

TYK15114.1 Zinc finger, CCHC-type [Cucumis melo var. makuwa]8.0e-2159.26Show/hide
Query:  DKMLNNKTEYEVENEAQQAYTNSSKEENEAHAEHSWKNFPNQTNQETIIMPQGPMTRAKAKRLQDGLN----AKFLAFNDKLQQLKYQESFGHPKVIMNL
        DKMLNN           +AYTNS+KEENE HAE+SW N   QTNQETIIM QG MT+A+AKR +D LN    A+F  FN   ++L+ QES GHP++IMNL
Subjt:  DKMLNNKTEYEVENEAQQAYTNSSKEENEAHAEHSWKNFPNQTNQETIIMPQGPMTRAKAKRLQDGLN----AKFLAFNDKLQQLKYQESFGHPKVIMNL

Query:  EIQIHSHL
        EI+IHSHL
Subjt:  EIQIHSHL

TYK19543.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]2.7e-0861.29Show/hide
Query:  EVENEA---QQAYTNSSKEENEAHAEHSWKNFPNQTNQETIIMPQGPMTRAKAKRLQDGLNA
        E EN+     +A+TNS++EENE HA +SW+N  +QTNQE IIM QG MT+A+AKRLQD LNA
Subjt:  EVENEA---QQAYTNSSKEENEAHAEHSWKNFPNQTNQETIIMPQGPMTRAKAKRLQDGLNA

TrEMBL top hitse value%identityAlignment
A0A5A7VCL9 Reverse transcriptase3.9e-2159.26Show/hide
Query:  DKMLNNKTEYEVENEAQQAYTNSSKEENEAHAEHSWKNFPNQTNQETIIMPQGPMTRAKAKRLQDGLN----AKFLAFNDKLQQLKYQESFGHPKVIMNL
        DKMLNN           +AYTNS+KEENE HAE+SW N   QTNQETIIM QG MT+A+AKR +D LN    A+F  FN   ++L+ QES GHP++IMNL
Subjt:  DKMLNNKTEYEVENEAQQAYTNSSKEENEAHAEHSWKNFPNQTNQETIIMPQGPMTRAKAKRLQDGLN----AKFLAFNDKLQQLKYQESFGHPKVIMNL

Query:  EIQIHSHL
        EI+IHSHL
Subjt:  EIQIHSHL

A0A5D3B744 Integrase catalytic domain-containing protein1.4e-0769.57Show/hide
Query:  SSKEENEAHAEHSWKNFPNQTNQETIIMPQGPMTRAKAKRLQDGLN
        +S+EENE HA +SW+N  +QTNQE IIM QG MT+A+AKRLQDGLN
Subjt:  SSKEENEAHAEHSWKNFPNQTNQETIIMPQGPMTRAKAKRLQDGLN

A0A5D3BSJ1 Uncharacterized protein3.0e-0556Show/hide
Query:  QQAYTNSSKEENEAHAEHSWKNFPNQTNQETIIMPQGPMTRAKAKRLQDG
        ++A+ NS++E+NEAHA + ++NF  QTNQ  +I  QG MT+A+AKRLQDG
Subjt:  QQAYTNSSKEENEAHAEHSWKNFPNQTNQETIIMPQGPMTRAKAKRLQDG

A0A5D3CW05 Zinc finger, CCHC-type3.9e-2159.26Show/hide
Query:  DKMLNNKTEYEVENEAQQAYTNSSKEENEAHAEHSWKNFPNQTNQETIIMPQGPMTRAKAKRLQDGLN----AKFLAFNDKLQQLKYQESFGHPKVIMNL
        DKMLNN           +AYTNS+KEENE HAE+SW N   QTNQETIIM QG MT+A+AKR +D LN    A+F  FN   ++L+ QES GHP++IMNL
Subjt:  DKMLNNKTEYEVENEAQQAYTNSSKEENEAHAEHSWKNFPNQTNQETIIMPQGPMTRAKAKRLQDGLN----AKFLAFNDKLQQLKYQESFGHPKVIMNL

Query:  EIQIHSHL
        EI+IHSHL
Subjt:  EIQIHSHL

A0A5D3D7R5 Transposon Ty3-G Gag-Pol polyprotein1.3e-0861.29Show/hide
Query:  EVENEA---QQAYTNSSKEENEAHAEHSWKNFPNQTNQETIIMPQGPMTRAKAKRLQDGLNA
        E EN+     +A+TNS++EENE HA +SW+N  +QTNQE IIM QG MT+A+AKRLQD LNA
Subjt:  EVENEA---QQAYTNSSKEENEAHAEHSWKNFPNQTNQETIIMPQGPMTRAKAKRLQDGLNA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTTGCCATTCTCTGCAATGACCCACCCACGGTTGCCACTGAGGTCGTTGAGGTGACCATGTTGATGACCCACACATTAAGGATAAAAAACCTATCCTTAATGAA
GCTGGCGAGACAGCTTCTTCGGCGCATACCCCCAACGCCCAACCTACTACCGCACCAGGAGAAGATGAAGACTTATGATAAGATGTTGAACAACAAAACAGAATATGAAG
TAGAAAATGAGGCTCAACAAGCTTACACCAATTCAAGTAAAGAGGAAAATGAAGCACATGCTGAACATTCGTGGAAGAACTTTCCAAATCAAACCAATCAAGAGACAATC
ATTATGCCTCAAGGCCCAATGACAAGAGCTAAAGCTAAAAGACTTCAAGATGGATTAAATGCTAAATTTTTAGCCTTTAATGACAAGTTGCAACAATTGAAATATCAAGA
GTCATTTGGACACCCAAAAGTCATAATGAATCTAGAAATTCAGATTCATTCACATCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAACTTGCCATTCTCTGCAATGACCCACCCACGGTTGCCACTGAGGTCGTTGAGGTGACCATGTTGATGACCCACACATTAAGGATAAAAAACCTATCCTTAATGAA
GCTGGCGAGACAGCTTCTTCGGCGCATACCCCCAACGCCCAACCTACTACCGCACCAGGAGAAGATGAAGACTTATGATAAGATGTTGAACAACAAAACAGAATATGAAG
TAGAAAATGAGGCTCAACAAGCTTACACCAATTCAAGTAAAGAGGAAAATGAAGCACATGCTGAACATTCGTGGAAGAACTTTCCAAATCAAACCAATCAAGAGACAATC
ATTATGCCTCAAGGCCCAATGACAAGAGCTAAAGCTAAAAGACTTCAAGATGGATTAAATGCTAAATTTTTAGCCTTTAATGACAAGTTGCAACAATTGAAATATCAAGA
GTCATTTGGACACCCAAAAGTCATAATGAATCTAGAAATTCAGATTCATTCACATCTTTAA
Protein sequenceShow/hide protein sequence
MELAILCNDPPTVATEVVEVTMLMTHTLRIKNLSLMKLARQLLRRIPPTPNLLPHQEKMKTYDKMLNNKTEYEVENEAQQAYTNSSKEENEAHAEHSWKNFPNQTNQETI
IMPQGPMTRAKAKRLQDGLNAKFLAFNDKLQQLKYQESFGHPKVIMNLEIQIHSHL