; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0017053 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017053
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr03:7522617..7525809
RNA-Seq ExpressionPI0017053
SyntenyPI0017053
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034814.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.7e-10046.17Show/hide
Query:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVIYSTPEVLQKNDIRAVHPKEEGKHMENTDERWTLVTRRKKQKQNYFKKESRLYREYKRKG
        +E  D A+++H       D   + +   SLIQFGSLEPVVIYS+PE LQ ND RA  PKEE K ++N +E WTLV RRKK+KQ++ +KES   R Y+ KG
Subjt:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVIYSTPEVLQKNDIRAVHPKEEGKHMENTDERWTLVTRRKKQKQNYFKKESRLYREYKRKG

Query:  KSQRRKTRRDARKFQPITKEGEELPRPRQPITLKDFFPENFSFDIVSCHAVSIAEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELSSMDINDLLSLL
        KSQRR TR++ RKF PI +E E L RPR+PI LKDFFP+NF  +IVSCH  SI E+DA PSN               + E T K E+L  + INDLL+L 
Subjt:  KSQRRKTRRDARKFQPITKEGEELPRPRQPITLKDFFPENFSFDIVSCHAVSIAEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELSSMDINDLLSLL

Query:  REIKDTIIEILKNDDVSTIPASQTKAF-------------------------------------------------------------------------
        RE+KDTIIEILKNDDVSTI +S T+ +                                                                         
Subjt:  REIKDTIIEILKNDDVSTIPASQTKAF-------------------------------------------------------------------------

Query:  -------------------------------------------PVTKGTYKPEQGTITTKKSKEVNVLKDRENDKIATQTKPEVPTKESIAIPQEKASKP
                                                   PVTKGT+K EQ  IT+KKS + +    ++N +  T+TK +    E IA  Q++ S P
Subjt:  -------------------------------------------PVTKGTYKPEQGTITTKKSKEVNVLKDRENDKIATQTKPEVPTKESIAIPQEKASKP

Query:  LVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTERFDPKAYKLMAKAGYDFTTRTEFKS-KIFDER
         VLRYIPLSRRK GES FAE S+NL V   EILKE+F  PLTK++KG AK+IEK+ LEA LPE+RT E FD K YKLMAKAGYDFTTR E KS KIFDER
Subjt:  LVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTERFDPKAYKLMAKAGYDFTTRTEFKS-KIFDER

Query:  HGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRIT
          LSPTQ+KLQKQGY IPNSR  +GY+SS+PVRIT
Subjt:  HGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRIT

KAA0046253.1 uncharacterized protein E6C27_scaffold284G00560 [Cucumis melo var. makuwa]7.4e-10144.13Show/hide
Query:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVIYSTPEVLQKNDIRAVHPKEEGKHMENTDERWTLVTRRKKQKQNYFKKESRLYREYKRKG
        +E  D A+++H       D   + +   SLIQFGSLEPVVIYS+PE LQ ND +A  PKEE K ++N +E WTLVTRRKK+KQ++F+KES  YR Y  KG
Subjt:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVIYSTPEVLQKNDIRAVHPKEEGKHMENTDERWTLVTRRKKQKQNYFKKESRLYREYKRKG

Query:  KSQRRKTRRDARKFQPITKEGEELPRPRQPITLKDFFPENFSFDIVSCHAVSIAEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELSSMDINDLLSLL
        KSQRR TR++ RKF PI +E E L RPR+ I LKDFFP+NFS +IVSCH  S  ++DA P N               + + T + E++  + INDLLSL 
Subjt:  KSQRRKTRRDARKFQPITKEGEELPRPRQPITLKDFFPENFSFDIVSCHAVSIAEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELSSMDINDLLSLL

Query:  REIKDTIIEILKNDDVSTIPASQTKA--------------------------------------------------------------------------
        RE+KDTIIEILKNDDVST   S TKA                                                                          
Subjt:  REIKDTIIEILKNDDVSTIPASQTKA--------------------------------------------------------------------------

Query:  ------------------------------------------------------------------------------FPVTKGTYKPEQGTITTKKSKE
                                                                                       PVTKGT+K EQ  IT+KKS +
Subjt:  ------------------------------------------------------------------------------FPVTKGTYKPEQGTITTKKSKE

Query:  VNVLKDRENDKIATQTKPEVPTKESIAIPQEKASKPLVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEK
         N +  ++N +  T+TK   P  E +A  Q++ S P VLRYIPLSRRKKGESPFAE S+NL V   EILKE+FT PLTK++KG AK+IEK+ LEA LPE+
Subjt:  VNVLKDRENDKIATQTKPEVPTKESIAIPQEKASKPLVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEK

Query:  RTTERFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRIT
        RT E FDPKAYKLMAKAGYDFTTRTE KS KIFD+R  LSPTQ+KLQKQGY IPNSR  +GY+SSEPVRIT
Subjt:  RTTERFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRIT

KAA0046553.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.0e-10246.13Show/hide
Query:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVIYSTPEVLQKNDIRAVHPKEEGKHMENTDERWTLVTRRKKQKQNYFKKESRLYREYKRKG
        +E  D  +++H       +   + +   SLIQFGSLEPVVIYS+PE LQ ND RA   KEE K ++N +E WTLVTRRKK KQ++ +KES  YR Y  KG
Subjt:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVIYSTPEVLQKNDIRAVHPKEEGKHMENTDERWTLVTRRKKQKQNYFKKESRLYREYKRKG

Query:  KSQRRKTRRDARKFQPITKEGEELPRPRQPITLKDFFPENFSFDIVSCHAVSIAEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELSSMDINDLLSLL
        KSQRR TR++ RKF PI ++ E L RPR+PI LKDFFP+NF  +IVSCH  S  E+DA P N               + + T + E+L S+ INDLL+L 
Subjt:  KSQRRKTRRDARKFQPITKEGEELPRPRQPITLKDFFPENFSFDIVSCHAVSIAEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELSSMDINDLLSLL

Query:  REIKDTIIEILKNDDVSTIPASQTKA--------------------------------------------------------------------------
        RE+KDTIIEILKNDDVST   S TKA                                                                          
Subjt:  REIKDTIIEILKNDDVSTIPASQTKA--------------------------------------------------------------------------

Query:  --------------------------------------------------FPVTKGTYKPEQGTITTKKSKEVNVLKDRENDKIATQTKPEVPTKESIAI
                                                           PVTKGT+K EQ  IT+KK+ + + L  ++N ++ T+TK   P  E IA 
Subjt:  --------------------------------------------------FPVTKGTYKPEQGTITTKKSKEVNVLKDRENDKIATQTKPEVPTKESIAI

Query:  PQEKASKPLVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTERFDPKAYKLMAKAGYDFTTRTEFK
         Q++ S P VLRYIPLSRRKKGESPFAE S+NL +   EILKE+FTTPLTK++KG AK+IEK+ LEA LPE+RT E FDPKAYKLMAKAGYDFTTRTE K
Subjt:  PQEKASKPLVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTERFDPKAYKLMAKAGYDFTTRTEFK

Query:  S-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRI
        S KIFDER  LSPTQ+KLQKQGY IPNSR  +GY+SSEPVRI
Subjt:  S-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRI

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]6.3e-10043.12Show/hide
Query:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVIYSTPEVLQKNDIRAVHPKEEGKHMENTDERWTLVTRRKKQKQNYFKKESRLYREYKRKG
        +E  D A+++H       D   + +   SLIQFGSLEPVVIYS+PE LQ ND RA  PKEE K ++N +E WTLVTRRKK+KQ++ +KES  YR Y+ KG
Subjt:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVIYSTPEVLQKNDIRAVHPKEEGKHMENTDERWTLVTRRKKQKQNYFKKESRLYREYKRKG

Query:  KSQRRKTRRDARKFQPITKEGEELPRPRQPITLKDFFPENFSFDIVSCHAVSIAEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELSSMDINDLLSLL
        KSQRR TR++ RKF PI +E E L RPR+PI LKDFFP+NF  +IVSCH  S  E+DA PSN               + E T K E+L  + INDLL+L 
Subjt:  KSQRRKTRRDARKFQPITKEGEELPRPRQPITLKDFFPENFSFDIVSCHAVSIAEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELSSMDINDLLSLL

Query:  REIKDTIIEILKNDDVSTIPASQ-----------------------------------------------------------------------------
        RE+KDTIIEILKNDDVSTI  S                                                                              
Subjt:  REIKDTIIEILKNDDVSTIPASQ-----------------------------------------------------------------------------

Query:  -----------------------------------------------------------------------------TKA--------------------
                                                                                     TKA                    
Subjt:  -----------------------------------------------------------------------------TKA--------------------

Query:  ---FPVTKGTYKPEQGTITTKKSKEVNVLKDRENDKIATQTKPEVPTKESIAIPQEKASKPLVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTT
            PVTKGT+K EQ  IT+KKS + + L  ++N ++ T+TK   P  E IA  Q++ S P VLRYIPLSRRKKGESPF E S+NL V   EILKE+FT 
Subjt:  ---FPVTKGTYKPEQGTITTKKSKEVNVLKDRENDKIATQTKPEVPTKESIAIPQEKASKPLVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTT

Query:  PLTKMDKGGAKRIEKESLEACLPEKRTTERFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRIT
        PLTK++KG AK+IEK+ L+A LPE+RT E FDPKAYKLMAKAGYDFTTRTE KS KIFDER  LSPTQ+KLQKQGY IPNSR  +GY+SSEPVRIT
Subjt:  PLTKMDKGGAKRIEKESLEACLPEKRTTERFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRIT

TYK18947.1 uncharacterized protein E5676_scaffold418G00310 [Cucumis melo var. makuwa]7.4e-10144.13Show/hide
Query:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVIYSTPEVLQKNDIRAVHPKEEGKHMENTDERWTLVTRRKKQKQNYFKKESRLYREYKRKG
        +E  D A+++H       D   + +   SLIQFGSLEPVVIYS+PE LQ ND +A  PKEE K ++N +E WTLVTRRKK+KQ++F+KES  YR Y  KG
Subjt:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVIYSTPEVLQKNDIRAVHPKEEGKHMENTDERWTLVTRRKKQKQNYFKKESRLYREYKRKG

Query:  KSQRRKTRRDARKFQPITKEGEELPRPRQPITLKDFFPENFSFDIVSCHAVSIAEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELSSMDINDLLSLL
        KSQRR TR++ RKF PI +E E L RPR+ I LKDFFP+NFS +IVSCH  S  ++DA P N               + + T + E++  + INDLLSL 
Subjt:  KSQRRKTRRDARKFQPITKEGEELPRPRQPITLKDFFPENFSFDIVSCHAVSIAEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELSSMDINDLLSLL

Query:  REIKDTIIEILKNDDVSTIPASQTKA--------------------------------------------------------------------------
        RE+KDTIIEILKNDDVST   S TKA                                                                          
Subjt:  REIKDTIIEILKNDDVSTIPASQTKA--------------------------------------------------------------------------

Query:  ------------------------------------------------------------------------------FPVTKGTYKPEQGTITTKKSKE
                                                                                       PVTKGT+K EQ  IT+KKS +
Subjt:  ------------------------------------------------------------------------------FPVTKGTYKPEQGTITTKKSKE

Query:  VNVLKDRENDKIATQTKPEVPTKESIAIPQEKASKPLVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEK
         N +  ++N +  T+TK   P  E +A  Q++ S P VLRYIPLSRRKKGESPFAE S+NL V   EILKE+FT PLTK++KG AK+IEK+ LEA LPE+
Subjt:  VNVLKDRENDKIATQTKPEVPTKESIAIPQEKASKPLVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEK

Query:  RTTERFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRIT
        RT E FDPKAYKLMAKAGYDFTTRTE KS KIFD+R  LSPTQ+KLQKQGY IPNSR  +GY+SSEPVRIT
Subjt:  RTTERFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRIT

TrEMBL top hitse value%identityAlignment
A0A5A7SUA1 Ty3-gypsy retrotransposon protein1.8e-10046.17Show/hide
Query:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVIYSTPEVLQKNDIRAVHPKEEGKHMENTDERWTLVTRRKKQKQNYFKKESRLYREYKRKG
        +E  D A+++H       D   + +   SLIQFGSLEPVVIYS+PE LQ ND RA  PKEE K ++N +E WTLV RRKK+KQ++ +KES   R Y+ KG
Subjt:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVIYSTPEVLQKNDIRAVHPKEEGKHMENTDERWTLVTRRKKQKQNYFKKESRLYREYKRKG

Query:  KSQRRKTRRDARKFQPITKEGEELPRPRQPITLKDFFPENFSFDIVSCHAVSIAEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELSSMDINDLLSLL
        KSQRR TR++ RKF PI +E E L RPR+PI LKDFFP+NF  +IVSCH  SI E+DA PSN               + E T K E+L  + INDLL+L 
Subjt:  KSQRRKTRRDARKFQPITKEGEELPRPRQPITLKDFFPENFSFDIVSCHAVSIAEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELSSMDINDLLSLL

Query:  REIKDTIIEILKNDDVSTIPASQTKAF-------------------------------------------------------------------------
        RE+KDTIIEILKNDDVSTI +S T+ +                                                                         
Subjt:  REIKDTIIEILKNDDVSTIPASQTKAF-------------------------------------------------------------------------

Query:  -------------------------------------------PVTKGTYKPEQGTITTKKSKEVNVLKDRENDKIATQTKPEVPTKESIAIPQEKASKP
                                                   PVTKGT+K EQ  IT+KKS + +    ++N +  T+TK +    E IA  Q++ S P
Subjt:  -------------------------------------------PVTKGTYKPEQGTITTKKSKEVNVLKDRENDKIATQTKPEVPTKESIAIPQEKASKP

Query:  LVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTERFDPKAYKLMAKAGYDFTTRTEFKS-KIFDER
         VLRYIPLSRRK GES FAE S+NL V   EILKE+F  PLTK++KG AK+IEK+ LEA LPE+RT E FD K YKLMAKAGYDFTTR E KS KIFDER
Subjt:  LVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTERFDPKAYKLMAKAGYDFTTRTEFKS-KIFDER

Query:  HGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRIT
          LSPTQ+KLQKQGY IPNSR  +GY+SS+PVRIT
Subjt:  HGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRIT

A0A5A7TRQ6 RNase H domain-containing protein3.6e-10144.13Show/hide
Query:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVIYSTPEVLQKNDIRAVHPKEEGKHMENTDERWTLVTRRKKQKQNYFKKESRLYREYKRKG
        +E  D A+++H       D   + +   SLIQFGSLEPVVIYS+PE LQ ND +A  PKEE K ++N +E WTLVTRRKK+KQ++F+KES  YR Y  KG
Subjt:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVIYSTPEVLQKNDIRAVHPKEEGKHMENTDERWTLVTRRKKQKQNYFKKESRLYREYKRKG

Query:  KSQRRKTRRDARKFQPITKEGEELPRPRQPITLKDFFPENFSFDIVSCHAVSIAEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELSSMDINDLLSLL
        KSQRR TR++ RKF PI +E E L RPR+ I LKDFFP+NFS +IVSCH  S  ++DA P N               + + T + E++  + INDLLSL 
Subjt:  KSQRRKTRRDARKFQPITKEGEELPRPRQPITLKDFFPENFSFDIVSCHAVSIAEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELSSMDINDLLSLL

Query:  REIKDTIIEILKNDDVSTIPASQTKA--------------------------------------------------------------------------
        RE+KDTIIEILKNDDVST   S TKA                                                                          
Subjt:  REIKDTIIEILKNDDVSTIPASQTKA--------------------------------------------------------------------------

Query:  ------------------------------------------------------------------------------FPVTKGTYKPEQGTITTKKSKE
                                                                                       PVTKGT+K EQ  IT+KKS +
Subjt:  ------------------------------------------------------------------------------FPVTKGTYKPEQGTITTKKSKE

Query:  VNVLKDRENDKIATQTKPEVPTKESIAIPQEKASKPLVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEK
         N +  ++N +  T+TK   P  E +A  Q++ S P VLRYIPLSRRKKGESPFAE S+NL V   EILKE+FT PLTK++KG AK+IEK+ LEA LPE+
Subjt:  VNVLKDRENDKIATQTKPEVPTKESIAIPQEKASKPLVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEK

Query:  RTTERFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRIT
        RT E FDPKAYKLMAKAGYDFTTRTE KS KIFD+R  LSPTQ+KLQKQGY IPNSR  +GY+SSEPVRIT
Subjt:  RTTERFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRIT

A0A5A7TSN4 Ty3-gypsy retrotransposon protein5.0e-10346.13Show/hide
Query:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVIYSTPEVLQKNDIRAVHPKEEGKHMENTDERWTLVTRRKKQKQNYFKKESRLYREYKRKG
        +E  D  +++H       +   + +   SLIQFGSLEPVVIYS+PE LQ ND RA   KEE K ++N +E WTLVTRRKK KQ++ +KES  YR Y  KG
Subjt:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVIYSTPEVLQKNDIRAVHPKEEGKHMENTDERWTLVTRRKKQKQNYFKKESRLYREYKRKG

Query:  KSQRRKTRRDARKFQPITKEGEELPRPRQPITLKDFFPENFSFDIVSCHAVSIAEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELSSMDINDLLSLL
        KSQRR TR++ RKF PI ++ E L RPR+PI LKDFFP+NF  +IVSCH  S  E+DA P N               + + T + E+L S+ INDLL+L 
Subjt:  KSQRRKTRRDARKFQPITKEGEELPRPRQPITLKDFFPENFSFDIVSCHAVSIAEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELSSMDINDLLSLL

Query:  REIKDTIIEILKNDDVSTIPASQTKA--------------------------------------------------------------------------
        RE+KDTIIEILKNDDVST   S TKA                                                                          
Subjt:  REIKDTIIEILKNDDVSTIPASQTKA--------------------------------------------------------------------------

Query:  --------------------------------------------------FPVTKGTYKPEQGTITTKKSKEVNVLKDRENDKIATQTKPEVPTKESIAI
                                                           PVTKGT+K EQ  IT+KK+ + + L  ++N ++ T+TK   P  E IA 
Subjt:  --------------------------------------------------FPVTKGTYKPEQGTITTKKSKEVNVLKDRENDKIATQTKPEVPTKESIAI

Query:  PQEKASKPLVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTERFDPKAYKLMAKAGYDFTTRTEFK
         Q++ S P VLRYIPLSRRKKGESPFAE S+NL +   EILKE+FTTPLTK++KG AK+IEK+ LEA LPE+RT E FDPKAYKLMAKAGYDFTTRTE K
Subjt:  PQEKASKPLVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTERFDPKAYKLMAKAGYDFTTRTEFK

Query:  S-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRI
        S KIFDER  LSPTQ+KLQKQGY IPNSR  +GY+SSEPVRI
Subjt:  S-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRI

A0A5A7TZU9 Ribonuclease H3.0e-10043.12Show/hide
Query:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVIYSTPEVLQKNDIRAVHPKEEGKHMENTDERWTLVTRRKKQKQNYFKKESRLYREYKRKG
        +E  D A+++H       D   + +   SLIQFGSLEPVVIYS+PE LQ ND RA  PKEE K ++N +E WTLVTRRKK+KQ++ +KES  YR Y+ KG
Subjt:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVIYSTPEVLQKNDIRAVHPKEEGKHMENTDERWTLVTRRKKQKQNYFKKESRLYREYKRKG

Query:  KSQRRKTRRDARKFQPITKEGEELPRPRQPITLKDFFPENFSFDIVSCHAVSIAEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELSSMDINDLLSLL
        KSQRR TR++ RKF PI +E E L RPR+PI LKDFFP+NF  +IVSCH  S  E+DA PSN               + E T K E+L  + INDLL+L 
Subjt:  KSQRRKTRRDARKFQPITKEGEELPRPRQPITLKDFFPENFSFDIVSCHAVSIAEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELSSMDINDLLSLL

Query:  REIKDTIIEILKNDDVSTIPASQ-----------------------------------------------------------------------------
        RE+KDTIIEILKNDDVSTI  S                                                                              
Subjt:  REIKDTIIEILKNDDVSTIPASQ-----------------------------------------------------------------------------

Query:  -----------------------------------------------------------------------------TKA--------------------
                                                                                     TKA                    
Subjt:  -----------------------------------------------------------------------------TKA--------------------

Query:  ---FPVTKGTYKPEQGTITTKKSKEVNVLKDRENDKIATQTKPEVPTKESIAIPQEKASKPLVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTT
            PVTKGT+K EQ  IT+KKS + + L  ++N ++ T+TK   P  E IA  Q++ S P VLRYIPLSRRKKGESPF E S+NL V   EILKE+FT 
Subjt:  ---FPVTKGTYKPEQGTITTKKSKEVNVLKDRENDKIATQTKPEVPTKESIAIPQEKASKPLVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTT

Query:  PLTKMDKGGAKRIEKESLEACLPEKRTTERFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRIT
        PLTK++KG AK+IEK+ L+A LPE+RT E FDPKAYKLMAKAGYDFTTRTE KS KIFDER  LSPTQ+KLQKQGY IPNSR  +GY+SSEPVRIT
Subjt:  PLTKMDKGGAKRIEKESLEACLPEKRTTERFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRIT

A0A5D3D5V8 RNase H domain-containing protein3.6e-10144.13Show/hide
Query:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVIYSTPEVLQKNDIRAVHPKEEGKHMENTDERWTLVTRRKKQKQNYFKKESRLYREYKRKG
        +E  D A+++H       D   + +   SLIQFGSLEPVVIYS+PE LQ ND +A  PKEE K ++N +E WTLVTRRKK+KQ++F+KES  YR Y  KG
Subjt:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVIYSTPEVLQKNDIRAVHPKEEGKHMENTDERWTLVTRRKKQKQNYFKKESRLYREYKRKG

Query:  KSQRRKTRRDARKFQPITKEGEELPRPRQPITLKDFFPENFSFDIVSCHAVSIAEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELSSMDINDLLSLL
        KSQRR TR++ RKF PI +E E L RPR+ I LKDFFP+NFS +IVSCH  S  ++DA P N               + + T + E++  + INDLLSL 
Subjt:  KSQRRKTRRDARKFQPITKEGEELPRPRQPITLKDFFPENFSFDIVSCHAVSIAEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELSSMDINDLLSLL

Query:  REIKDTIIEILKNDDVSTIPASQTKA--------------------------------------------------------------------------
        RE+KDTIIEILKNDDVST   S TKA                                                                          
Subjt:  REIKDTIIEILKNDDVSTIPASQTKA--------------------------------------------------------------------------

Query:  ------------------------------------------------------------------------------FPVTKGTYKPEQGTITTKKSKE
                                                                                       PVTKGT+K EQ  IT+KKS +
Subjt:  ------------------------------------------------------------------------------FPVTKGTYKPEQGTITTKKSKE

Query:  VNVLKDRENDKIATQTKPEVPTKESIAIPQEKASKPLVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEK
         N +  ++N +  T+TK   P  E +A  Q++ S P VLRYIPLSRRKKGESPFAE S+NL V   EILKE+FT PLTK++KG AK+IEK+ LEA LPE+
Subjt:  VNVLKDRENDKIATQTKPEVPTKESIAIPQEKASKPLVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEK

Query:  RTTERFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRIT
        RT E FDPKAYKLMAKAGYDFTTRTE KS KIFD+R  LSPTQ+KLQKQGY IPNSR  +GY+SSEPVRIT
Subjt:  RTTERFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRIT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGCTTGAAAAGAAGGTTAACATGCTCCTGAAAGCGGTTGAAGAAAGGGATTATGAGATTGCATCCCTGAGAAATCACATTGAAAGTCGTGACGCTGCTGAATC
AAGTCACACATATACCACCAAGAATAAGGACAAAGGGAAGGCAATTTTACAGGAAAGTAGTCTAATCCAATTTGGATCTTTGGAGCCTGTTGTTATATATTCTACACCAG
AGGTCTTACAGAAAAATGACATCCGAGCTGTTCACCCAAAAGAAGAAGGAAAGCACATGGAGAATACTGACGAGAGATGGACGCTAGTCACGCGTCGAAAAAAACAAAAA
CAAAATTACTTTAAAAAAGAGTCTCGCTTGTACCGAGAGTATAAAAGAAAGGGTAAGTCTCAGAGAAGAAAAACAAGGAGGGATGCAAGGAAGTTTCAACCAATCACTAA
AGAAGGTGAGGAGCTTCCTCGACCACGACAACCAATAACTTTGAAAGACTTTTTCCCCGAGAACTTTTCATTCGATATTGTTTCGTGCCATGCTGTCAGTATAGCTGAAG
ATGATGCTTCTCCCTCAAATTCACCAGAAGTCAATACAACTGGGGATGACACTTCTCCCTCAAAGTCTGCAGAAGCAACAACCAAGCTAGAGGAATTGTCTTCTATGGAC
ATAAATGATTTGTTGTCACTCCTACGAGAAATCAAAGATACAATTATCGAGATATTAAAAAATGATGATGTCTCGACTATTCCTGCGTCACAAACGAAGGCATTTCCCGT
AACCAAAGGCACTTATAAGCCCGAGCAAGGAACGATCACAACAAAAAAGTCAAAGGAAGTGAATGTACTCAAGGATCGAGAGAATGATAAAATAGCGACCCAAACTAAGC
CTGAAGTGCCGACAAAAGAAAGTATAGCGATTCCTCAAGAAAAAGCCTCAAAACCTCTCGTTTTACGTTACATTCCACTATCTCGACGCAAGAAGGGAGAATCGCCATTT
GCAGAAAATTCACAAAATTTGGCGGTTGGAGGTGTCGAAATATTAAAGGAAAGTTTTACCACGCCACTTACCAAGATGGATAAAGGAGGGGCGAAAAGGATTGAGAAAGA
GAGCCTAGAAGCATGCCTTCCAGAAAAACGAACGACGGAAAGATTCGATCCAAAAGCATATAAGTTGATGGCAAAGGCGGGTTATGACTTTACAACCCGTACCGAGTTCA
AAAGCAAGATATTTGATGAAAGGCATGGGCTTTCTCCTACGCAAAGGAAGCTTCAAAAGCAAGGATATTTTATACCAAATTCAAGACCAGAAGTTGGGTATAAGTCTTCC
GAGCCTGTTCGAATAACTGATATTGAATGTACCGACAAGGAAGGACAAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAGCTTGAAAAGAAGGTTAACATGCTCCTGAAAGCGGTTGAAGAAAGGGATTATGAGATTGCATCCCTGAGAAATCACATTGAAAGTCGTGACGCTGCTGAATC
AAGTCACACATATACCACCAAGAATAAGGACAAAGGGAAGGCAATTTTACAGGAAAGTAGTCTAATCCAATTTGGATCTTTGGAGCCTGTTGTTATATATTCTACACCAG
AGGTCTTACAGAAAAATGACATCCGAGCTGTTCACCCAAAAGAAGAAGGAAAGCACATGGAGAATACTGACGAGAGATGGACGCTAGTCACGCGTCGAAAAAAACAAAAA
CAAAATTACTTTAAAAAAGAGTCTCGCTTGTACCGAGAGTATAAAAGAAAGGGTAAGTCTCAGAGAAGAAAAACAAGGAGGGATGCAAGGAAGTTTCAACCAATCACTAA
AGAAGGTGAGGAGCTTCCTCGACCACGACAACCAATAACTTTGAAAGACTTTTTCCCCGAGAACTTTTCATTCGATATTGTTTCGTGCCATGCTGTCAGTATAGCTGAAG
ATGATGCTTCTCCCTCAAATTCACCAGAAGTCAATACAACTGGGGATGACACTTCTCCCTCAAAGTCTGCAGAAGCAACAACCAAGCTAGAGGAATTGTCTTCTATGGAC
ATAAATGATTTGTTGTCACTCCTACGAGAAATCAAAGATACAATTATCGAGATATTAAAAAATGATGATGTCTCGACTATTCCTGCGTCACAAACGAAGGCATTTCCCGT
AACCAAAGGCACTTATAAGCCCGAGCAAGGAACGATCACAACAAAAAAGTCAAAGGAAGTGAATGTACTCAAGGATCGAGAGAATGATAAAATAGCGACCCAAACTAAGC
CTGAAGTGCCGACAAAAGAAAGTATAGCGATTCCTCAAGAAAAAGCCTCAAAACCTCTCGTTTTACGTTACATTCCACTATCTCGACGCAAGAAGGGAGAATCGCCATTT
GCAGAAAATTCACAAAATTTGGCGGTTGGAGGTGTCGAAATATTAAAGGAAAGTTTTACCACGCCACTTACCAAGATGGATAAAGGAGGGGCGAAAAGGATTGAGAAAGA
GAGCCTAGAAGCATGCCTTCCAGAAAAACGAACGACGGAAAGATTCGATCCAAAAGCATATAAGTTGATGGCAAAGGCGGGTTATGACTTTACAACCCGTACCGAGTTCA
AAAGCAAGATATTTGATGAAAGGCATGGGCTTTCTCCTACGCAAAGGAAGCTTCAAAAGCAAGGATATTTTATACCAAATTCAAGACCAGAAGTTGGGTATAAGTCTTCC
GAGCCTGTTCGAATAACTGATATTGAATGTACCGACAAGGAAGGACAAAAATGA
Protein sequenceShow/hide protein sequence
MAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVIYSTPEVLQKNDIRAVHPKEEGKHMENTDERWTLVTRRKKQK
QNYFKKESRLYREYKRKGKSQRRKTRRDARKFQPITKEGEELPRPRQPITLKDFFPENFSFDIVSCHAVSIAEDDASPSNSPEVNTTGDDTSPSKSAEATTKLEELSSMD
INDLLSLLREIKDTIIEILKNDDVSTIPASQTKAFPVTKGTYKPEQGTITTKKSKEVNVLKDRENDKIATQTKPEVPTKESIAIPQEKASKPLVLRYIPLSRRKKGESPF
AENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTERFDPKAYKLMAKAGYDFTTRTEFKSKIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSS
EPVRITDIECTDKEGQK