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PI0017057 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017057
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionprotein CURVATURE THYLAKOID 1C, chloroplastic
Genome locationchr01:27751691..27754282
RNA-Seq ExpressionPI0017057
SyntenyPI0017057
Gene Ontology termsGO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR025564 - Cyanobacterial aminoacyl-tRNA synthetase, CAAD domain
IPR033344 - Protein CURVATURE THYLAKOID 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059311.1 protein CURVATURE THYLAKOID 1C [Cucumis melo var. makuwa]2.9e-6794.48Show/hide
Query:  MASIVATLPPPLLAPPKSFTILNTSQKLSVFSIANGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLP
        MASIVATLPPPLLAP KSFTILN SQKLSV S A GR GNVVVKAVGGSSESSTSLDI+KSVRNVWDQPEDR ALFGLGFAAVATAWTATNLVTAIDKLP
Subjt:  MASIVATLPPPLLAPPKSFTILNTSQKLSVFSIANGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLP

Query:  LLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ
        LLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ
Subjt:  LLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ

XP_004141763.1 protein CURVATURE THYLAKOID 1C, chloroplastic [Cucumis sativus]1.8e-6997.24Show/hide
Query:  MASIVATLPPPLLAPPKSFTILNTSQKLSVFSIANGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLP
        MASIVATLPPPLLAP KSFTILN SQKLSVFS ANGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATN+VTAIDKLP
Subjt:  MASIVATLPPPLLAPPKSFTILNTSQKLSVFSIANGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLP

Query:  LLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ
        LLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ
Subjt:  LLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ

XP_008462170.1 PREDICTED: protein CURVATURE THYLAKOID 1C, chloroplastic [Cucumis melo]1.4e-6693.79Show/hide
Query:  MASIVATLPPPLLAPPKSFTILNTSQKLSVFSIANGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLP
        MASIVATLPPPLLAP KSFTILN SQKLSV S A GR GNVVVKAVGGSSESSTSLDI+KSVRNVWDQPEDR ALFGLGFAAVATAWTATNLV AIDKLP
Subjt:  MASIVATLPPPLLAPPKSFTILNTSQKLSVFSIANGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLP

Query:  LLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ
        LLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ
Subjt:  LLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ

XP_023000405.1 protein CURVATURE THYLAKOID 1C, chloroplastic [Cucurbita maxima]8.5e-5982.76Show/hide
Query:  MASIVATLPPPLLAPPKSFTILNTSQKLSVFSIANGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLP
        MASI ATLPPPLLAP KSF  L T QK++VF IA GRS N +VKA+G SSESSTS+DI+KSVRNVWDQPEDRL LFGLGFAAV  AWTATNLVTA+DKLP
Subjt:  MASIVATLPPPLLAPPKSFTILNTSQKLSVFSIANGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLP

Query:  LLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ
        LLPGVLEFIG LVSWWFVYRYLLFKPNREELLQIINKS+ DV GQ
Subjt:  LLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ

XP_038897597.1 protein CURVATURE THYLAKOID 1C, chloroplastic [Benincasa hispida]1.0e-6793.79Show/hide
Query:  MASIVATLPPPLLAPPKSFTILNTSQKLSVFSIANGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLP
        MASIVATLPPPLLAP KSFT+LNTSQKL+ F IAN RSGNVVVKAVGGSSESSTSLDI+KSVRNVWDQPEDRLALFGLGFAAVAT WTATNLVTAIDKLP
Subjt:  MASIVATLPPPLLAPPKSFTILNTSQKLSVFSIANGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLP

Query:  LLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ
        LLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSI+DVFGQ
Subjt:  LLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ

TrEMBL top hitse value%identityAlignment
A0A0A0KC66 CAAD domain-containing protein8.8e-7097.24Show/hide
Query:  MASIVATLPPPLLAPPKSFTILNTSQKLSVFSIANGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLP
        MASIVATLPPPLLAP KSFTILN SQKLSVFS ANGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATN+VTAIDKLP
Subjt:  MASIVATLPPPLLAPPKSFTILNTSQKLSVFSIANGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLP

Query:  LLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ
        LLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ
Subjt:  LLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ

A0A1S3CHU0 protein CURVATURE THYLAKOID 1C, chloroplastic7.0e-6793.79Show/hide
Query:  MASIVATLPPPLLAPPKSFTILNTSQKLSVFSIANGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLP
        MASIVATLPPPLLAP KSFTILN SQKLSV S A GR GNVVVKAVGGSSESSTSLDI+KSVRNVWDQPEDR ALFGLGFAAVATAWTATNLV AIDKLP
Subjt:  MASIVATLPPPLLAPPKSFTILNTSQKLSVFSIANGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLP

Query:  LLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ
        LLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ
Subjt:  LLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ

A0A5D3BWY3 Protein CURVATURE THYLAKOID 1C1.4e-6794.48Show/hide
Query:  MASIVATLPPPLLAPPKSFTILNTSQKLSVFSIANGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLP
        MASIVATLPPPLLAP KSFTILN SQKLSV S A GR GNVVVKAVGGSSESSTSLDI+KSVRNVWDQPEDR ALFGLGFAAVATAWTATNLVTAIDKLP
Subjt:  MASIVATLPPPLLAPPKSFTILNTSQKLSVFSIANGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLP

Query:  LLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ
        LLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ
Subjt:  LLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ

A0A6J1HLG0 protein CURVATURE THYLAKOID 1C, chloroplastic1.6e-5883.56Show/hide
Query:  MASIVATLPPPLLAPPKSFTILNTSQ-KLSVFSIANGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKL
        MASI ATLPPPLLAP KSFT L T Q KL+VF IA GRS N +VKA+G SSESSTS+DI+KSVRNVWDQPEDRL LFGLGFAAV  AWTATNLVTA+DKL
Subjt:  MASIVATLPPPLLAPPKSFTILNTSQ-KLSVFSIANGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKL

Query:  PLLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ
        PLLPGVLEFIG LVSWWFVYRYLLFKPNREELLQIINKS+ DV GQ
Subjt:  PLLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ

A0A6J1KFS9 protein CURVATURE THYLAKOID 1C, chloroplastic4.1e-5982.76Show/hide
Query:  MASIVATLPPPLLAPPKSFTILNTSQKLSVFSIANGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLP
        MASI ATLPPPLLAP KSF  L T QK++VF IA GRS N +VKA+G SSESSTS+DI+KSVRNVWDQPEDRL LFGLGFAAV  AWTATNLVTA+DKLP
Subjt:  MASIVATLPPPLLAPPKSFTILNTSQKLSVFSIANGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLP

Query:  LLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ
        LLPGVLEFIG LVSWWFVYRYLLFKPNREELLQIINKS+ DV GQ
Subjt:  LLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ

SwissProt top hitse value%identityAlignment
O04616 Protein CURVATURE THYLAKOID 1A, chloroplastic6.2e-1234.15Show/hide
Query:  PPKSFTILNTSQKLSVFSIANGRSGNVVVKAVGGSSESST--SLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLPLLPGVLEFIGAL
        PP+SF   + +  L + S  NG     ++K    S E+S+  + +++  ++  WD  E++  +   G  A+   W ++ +V AI+ +PLLP V+E +G  
Subjt:  PPKSFTILNTSQKLSVFSIANGRSGNVVVKAVGGSSESST--SLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLPLLPGVLEFIGAL

Query:  VSWWFVYRYLLFKPNREELLQII
         + WFVYRYLLFK +R+EL + I
Subjt:  VSWWFVYRYLLFKPNREELLQII

Q119Z5 Glutamate--tRNA ligase7.1e-0834.52Show/hide
Query:  VRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLPLLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ
        +  ++ Q + +L LFG     + T      ++ A+D +P+L  + E IG +   WFVYRYLL + NR+ELL  I     ++FG+
Subjt:  VRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLPLLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ

Q8LCA1 Protein CURVATURE THYLAKOID 1B, chloroplastic2.4e-1637.89Show/hide
Query:  SESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLPLLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFG
        +E++   +IVK+ +  W++ +D+ A+  L FA V   W +  +++AID+LPL+PGVLE +G   + WF Y+ L+FKP+RE L + +  +  D+ G
Subjt:  SESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLPLLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFG

Q8LDD3 Protein CURVATURE THYLAKOID 1D, chloroplastic8.6e-0628.71Show/hide
Query:  KAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLPLLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVF
        +A     E + +L+ +  ++   D+    + L+G G  A+   +  + +V++++ +PL P ++E +G   + WF  RYLLFK NREEL   +++    V 
Subjt:  KAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLPLLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVF

Query:  G
        G
Subjt:  G

Q9M812 Protein CURVATURE THYLAKOID 1C, chloroplastic2.2e-3348.72Show/hide
Query:  MASIVATLPPPLLAPPKS----------FTILNTSQKLSVFSIA-NGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTA
        MASI ATLP PLL   +           F++   +  LS  S+  N  S +++VKA G SS+SST LD+V +++NVWD+ EDRL L GLGFA +   W +
Subjt:  MASIVATLPPPLLAPPKS----------FTILNTSQKLSVFSIA-NGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTA

Query:  TNLVTAIDKLPLLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ
         NL+TAIDKLP++    E +G L S WF YRYLLFKP+R+EL +I+ KS+ D+ GQ
Subjt:  TNLVTAIDKLPLLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ

Arabidopsis top hitse value%identityAlignment
AT1G52220.1 FUNCTIONS IN: molecular_function unknown1.6e-3448.72Show/hide
Query:  MASIVATLPPPLLAPPKS----------FTILNTSQKLSVFSIA-NGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTA
        MASI ATLP PLL   +           F++   +  LS  S+  N  S +++VKA G SS+SST LD+V +++NVWD+ EDRL L GLGFA +   W +
Subjt:  MASIVATLPPPLLAPPKS----------FTILNTSQKLSVFSIA-NGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTA

Query:  TNLVTAIDKLPLLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ
         NL+TAIDKLP++    E +G L S WF YRYLLFKP+R+EL +I+ KS+ D+ GQ
Subjt:  TNLVTAIDKLPLLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ

AT1G52220.2 FUNCTIONS IN: molecular_function unknown1.1e-3248.08Show/hide
Query:  MASIVATLPPPLLAPPKS----------FTILNTSQKLSVFSIA-NGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTA
        MASI ATLP PLL   +           F++   +  LS  S+  N  S +++VKA G SS+SST LD+V +++N WD+ EDRL L GLGFA +   W +
Subjt:  MASIVATLPPPLLAPPKS----------FTILNTSQKLSVFSIA-NGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTA

Query:  TNLVTAIDKLPLLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ
         NL+TAIDKLP++    E +G L S WF YRYLLFKP+R+EL +I+ KS+ D+ GQ
Subjt:  TNLVTAIDKLPLLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ

AT1G52220.3 FUNCTIONS IN: molecular_function unknown1.6e-1838.46Show/hide
Query:  MASIVATLPPPLLAPPKS----------FTILNTSQKLSVFSIA-NGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTA
        MASI ATLP PLL   +           F++   +  LS  S+  N  S +++VKA G SS+SST LD+V +++NV                        
Subjt:  MASIVATLPPPLLAPPKS----------FTILNTSQKLSVFSIA-NGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTA

Query:  TNLVTAIDKLPLLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ
             AIDKLP++    E +G L S WF YRYLLFKP+R+EL +I+ KS+ D+ GQ
Subjt:  TNLVTAIDKLPLLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ

AT2G46820.1 photosystem I P subunit1.7e-1737.89Show/hide
Query:  SESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLPLLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFG
        +E++   +IVK+ +  W++ +D+ A+  L FA V   W +  +++AID+LPL+PGVLE +G   + WF Y+ L+FKP+RE L + +  +  D+ G
Subjt:  SESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLPLLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFG

AT2G46820.2 photosystem I P subunit1.7e-1737.89Show/hide
Query:  SESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLPLLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFG
        +E++   +IVK+ +  W++ +D+ A+  L FA V   W +  +++AID+LPL+PGVLE +G   + WF Y+ L+FKP+RE L + +  +  D+ G
Subjt:  SESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLPLLPGVLEFIGALVSWWFVYRYLLFKPNREELLQIINKSILDVFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATTGTTGCTACTTTACCTCCGCCATTGTTGGCGCCTCCCAAAAGCTTTACTATTCTGAACACTTCTCAGAAGCTCTCTGTTTTCTCCATTGCAAACGGACG
TTCTGGCAATGTTGTTGTAAAGGCTGTCGGAGGCAGCTCTGAGTCTTCTACTTCCCTTGATATTGTTAAGTCTGTTCGAAATGTTTGGGATCAACCCGAAGACCGACTGG
CGCTTTTTGGCCTGGGATTTGCAGCTGTAGCAACTGCATGGACAGCAACAAATCTTGTTACGGCCATTGACAAGCTACCACTGCTTCCAGGTGTATTAGAATTCATAGGA
GCACTGGTTTCTTGGTGGTTCGTGTATCGCTACCTCCTGTTCAAGCCAAATCGGGAAGAGCTTTTGCAGATAATCAACAAGTCAATATTAGATGTATTTGGACAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCATTGTTGCTACTTTACCTCCGCCATTGTTGGCGCCTCCCAAAAGCTTTACTATTCTGAACACTTCTCAGAAGCTCTCTGTTTTCTCCATTGCAAACGGACG
TTCTGGCAATGTTGTTGTAAAGGCTGTCGGAGGCAGCTCTGAGTCTTCTACTTCCCTTGATATTGTTAAGTCTGTTCGAAATGTTTGGGATCAACCCGAAGACCGACTGG
CGCTTTTTGGCCTGGGATTTGCAGCTGTAGCAACTGCATGGACAGCAACAAATCTTGTTACGGCCATTGACAAGCTACCACTGCTTCCAGGTGTATTAGAATTCATAGGA
GCACTGGTTTCTTGGTGGTTCGTGTATCGCTACCTCCTGTTCAAGCCAAATCGGGAAGAGCTTTTGCAGATAATCAACAAGTCAATATTAGATGTATTTGGACAGTAA
Protein sequenceShow/hide protein sequence
MASIVATLPPPLLAPPKSFTILNTSQKLSVFSIANGRSGNVVVKAVGGSSESSTSLDIVKSVRNVWDQPEDRLALFGLGFAAVATAWTATNLVTAIDKLPLLPGVLEFIG
ALVSWWFVYRYLLFKPNREELLQIINKSILDVFGQ