; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0017076 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017076
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCRM domain-containing protein
Genome locationchr01:1970790..1973042
RNA-Seq ExpressionPI0017076
SyntenyPI0017076
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001890 - RNA-binding, CRM domain
IPR035920 - YhbY-like superfamily
IPR040286 - CRM domain-containing protein At3g25440-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031492.1 putative CRM domain-containing protein [Cucumis melo var. makuwa]4.3e-16592.19Show/hide
Query:  SRGSLFGFISPIRNVSPLSLLSTPTSLGQSSYGSCEHQASSRIVKSLNESTSIDCPPGFSFTRRYSMWENSGGFKGWQSVRHFSNAVMELKTDSNTVRFS
        S GSLFGF S IRN SPLSLLS PTS GQSS+GSCEHQASSRIVKSLNESTS DCPPG S T RYSMWE+ GGFK WQSVRHFSNAV+ELKTDSNTVRFS
Subjt:  SRGSLFGFISPIRNVSPLSLLSTPTSLGQSSYGSCEHQASSRIVKSLNESTSIDCPPGFSFTRRYSMWENSGGFKGWQSVRHFSNAVMELKTDSNTVRFS

Query:  FGCPTSTNGSQLKQ-KVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILTEEEKHYLKRTGE
        FG P+STNGSQLKQ KVAKTK SKK KLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEIPK  VEKYDPEILTEEEKHYLKRTGE
Subjt:  FGCPTSTNGSQLKQ-KVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILTEEEKHYLKRTGE

Query:  KRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLSKDKALEKYRYEQ
        K+KNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEEL+RLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLSKDKALEKYRYEQ
Subjt:  KRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLSKDKALEKYRYEQ

Query:  SLEHTSQFIEKLEKELEDFHKHLAQFKRRKEDA
        SLEHTSQFIEKLEKELEDF KHLAQFKRRKEDA
Subjt:  SLEHTSQFIEKLEKELEDFHKHLAQFKRRKEDA

KAG7011409.1 putative CRM domain-containing protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.8e-15583Show/hide
Query:  MPRCRGLSVIAISRGSLFGFISPIRNVSPLSLLSTPTSLGQSSYGSCEHQASSRIVKSLNESTSIDCPPGFSFTRRYSMWENSGGFKGWQSVRHFSNAVM
        M R   LS IAISR SL+GFIS IRNVS LSL + P+S GQSSY SCE+Q S+ I KSL ESTSI  PPGF F +RYSM E+ GGF+ WQSVRHFSN  +
Subjt:  MPRCRGLSVIAISRGSLFGFISPIRNVSPLSLLSTPTSLGQSSYGSCEHQASSRIVKSLNESTSIDCPPGFSFTRRYSMWENSGGFKGWQSVRHFSNAVM

Query:  ELKTDSNTVRFSFGCPTSTNGSQLKQ-KVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILT
        ELKTDSN VRFSFG  +STNGS  KQ KVAK K SKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFE+PK  +E YDPEILT
Subjt:  ELKTDSNTVRFSFGCPTSTNGSQLKQ-KVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILT

Query:  EEEKHYLKRTGEKRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLS
        EEEKHYLKRTGEK+KNF+LLGRRGVFGGVVLNMH+HWKKHETVKVICKPCKPGQVHEYAEEL RLSKGIVIDIKPNNSI+FYRGKNYV+PEVMSPPDTLS
Subjt:  EEEKHYLKRTGEKRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLS

Query:  KDKALEKYRYEQSLEHTSQFIEKLEKELEDFHKHLAQFKRRKEDAALESMVNS
        KDKALEKY+YEQSLEHTSQFIEKLEKELEDF KHLAQFKR+KE+AALE MVNS
Subjt:  KDKALEKYRYEQSLEHTSQFIEKLEKELEDFHKHLAQFKRRKEDAALESMVNS

XP_008455218.1 PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucumis melo]8.1e-17291.88Show/hide
Query:  MPRCRGLSVIAISRGSLFGFISPIRNVSPLSLLSTPTSLGQSSYGSCEHQASSRIVKSLNESTSIDCPPGFSFTRRYSMWENSGGFKGWQSVRHFSNAVM
        MPRCRG S+I ISRGSLFGF S IRN SPLSLLS PTS GQSS+GSCEHQASSRIVKSLNESTS DCPPG S T RYSMWE+ GGFK WQSVRHFSNAV+
Subjt:  MPRCRGLSVIAISRGSLFGFISPIRNVSPLSLLSTPTSLGQSSYGSCEHQASSRIVKSLNESTSIDCPPGFSFTRRYSMWENSGGFKGWQSVRHFSNAVM

Query:  ELKTDSNTVRFSFGCPTSTNGSQLKQ-KVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILT
        ELKTDSNTVRFSFG P+STNGSQLKQ KVAKTK SKK KLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEIPK  VEKYDPEILT
Subjt:  ELKTDSNTVRFSFGCPTSTNGSQLKQ-KVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILT

Query:  EEEKHYLKRTGEKRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLS
        EEEKHYLKRTGEK+KNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEEL+RLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLS
Subjt:  EEEKHYLKRTGEKRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLS

Query:  KDKALEKYRYEQSLEHTSQFIEKLEKELEDFHKHLAQFKRRKEDA
        KDKALEKYRYEQSLEHTSQFIEKLEKELEDF KHLAQFKRRKEDA
Subjt:  KDKALEKYRYEQSLEHTSQFIEKLEKELEDFHKHLAQFKRRKEDA

XP_011658783.1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucumis sativus]2.6e-17892.33Show/hide
Query:  MPRCRGLSVIAISRGSLFGFISPIRNVSPLSLLSTPTSLGQSSYGSCEHQASSRIVKSLNESTSIDCPPGFSFTRRYSMWENSGGFKGWQSVRHFSNAVM
        MPRCRGLS+IA SRGSLFGFI  IRNVSPLSLLS PTS  QSS+GS EHQASS IVKSLNES S DCPPGFSFTRRYSM E+SGGFK WQSVRHFSNAV+
Subjt:  MPRCRGLSVIAISRGSLFGFISPIRNVSPLSLLSTPTSLGQSSYGSCEHQASSRIVKSLNESTSIDCPPGFSFTRRYSMWENSGGFKGWQSVRHFSNAVM

Query:  ELKTDSNTVRFSFGCPTSTNGSQLKQKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILTE
        ELKTD+NTVRFSFGCP+STNGS+LKQKVAKTK SKKAKLNELR YRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEIPKP VEKYDPEILTE
Subjt:  ELKTDSNTVRFSFGCPTSTNGSQLKQKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILTE

Query:  EEKHYLKRTGEKRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLSK
        EEKHYLKRTGEK+KNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPP+TLSK
Subjt:  EEKHYLKRTGEKRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLSK

Query:  DKALEKYRYEQSLEHTSQFIEKLEKELEDFHKHLAQFKRRKEDAALESMVNS
        DKALEKY+YEQSLEHTSQFIEKLEKELEDF KHLAQFKRRKEDAALESMVNS
Subjt:  DKALEKYRYEQSLEHTSQFIEKLEKELEDFHKHLAQFKRRKEDAALESMVNS

XP_022967603.1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita maxima]1.7e-15884.14Show/hide
Query:  MPRCRGLSVIAISRGSLFGFISPIRNVSPLSLLSTPTSLGQSSYGSCEHQASSRIVKSLNESTSIDCPPGFSFTRRYSMWENSGGFKGWQSVRHFSNAVM
        M R   LS IAISR SL+GFIS IRNVS LSL + PTS GQSSY SCEHQ S+ I KSL ESTSI  PPGF FT+RYSM E+ GGF+ WQSVRHFSN  +
Subjt:  MPRCRGLSVIAISRGSLFGFISPIRNVSPLSLLSTPTSLGQSSYGSCEHQASSRIVKSLNESTSIDCPPGFSFTRRYSMWENSGGFKGWQSVRHFSNAVM

Query:  ELKTDSNTVRFSFGCPTSTNGSQLKQ-KVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILT
        ELKTDSN VRFSFG  +STNGS  KQ KVAK K SKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFE+PK  +E YDPEILT
Subjt:  ELKTDSNTVRFSFGCPTSTNGSQLKQ-KVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILT

Query:  EEEKHYLKRTGEKRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLS
        EEEKHYLKRTGEK+KNFVLLGRRGVFGGVVLNMH+HWKKHETVKVICKPCKPGQVHEYAEEL RLSKGIVIDIKPNNSI+FYRGKNYVQPEVMSPPDTLS
Subjt:  EEEKHYLKRTGEKRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLS

Query:  KDKALEKYRYEQSLEHTSQFIEKLEKELEDFHKHLAQFKRRKEDAALESMVNS
        KDKALEKY+YEQSLEHTSQF+EKLEKELEDFHKHLAQFKR+KE+AA+E MVNS
Subjt:  KDKALEKYRYEQSLEHTSQFIEKLEKELEDFHKHLAQFKRRKEDAALESMVNS

TrEMBL top hitse value%identityAlignment
A0A0A0K5Y2 CRM domain-containing protein1.3e-17892.33Show/hide
Query:  MPRCRGLSVIAISRGSLFGFISPIRNVSPLSLLSTPTSLGQSSYGSCEHQASSRIVKSLNESTSIDCPPGFSFTRRYSMWENSGGFKGWQSVRHFSNAVM
        MPRCRGLS+IA SRGSLFGFI  IRNVSPLSLLS PTS  QSS+GS EHQASS IVKSLNES S DCPPGFSFTRRYSM E+SGGFK WQSVRHFSNAV+
Subjt:  MPRCRGLSVIAISRGSLFGFISPIRNVSPLSLLSTPTSLGQSSYGSCEHQASSRIVKSLNESTSIDCPPGFSFTRRYSMWENSGGFKGWQSVRHFSNAVM

Query:  ELKTDSNTVRFSFGCPTSTNGSQLKQKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILTE
        ELKTD+NTVRFSFGCP+STNGS+LKQKVAKTK SKKAKLNELR YRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEIPKP VEKYDPEILTE
Subjt:  ELKTDSNTVRFSFGCPTSTNGSQLKQKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILTE

Query:  EEKHYLKRTGEKRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLSK
        EEKHYLKRTGEK+KNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPP+TLSK
Subjt:  EEKHYLKRTGEKRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLSK

Query:  DKALEKYRYEQSLEHTSQFIEKLEKELEDFHKHLAQFKRRKEDAALESMVNS
        DKALEKY+YEQSLEHTSQFIEKLEKELEDF KHLAQFKRRKEDAALESMVNS
Subjt:  DKALEKYRYEQSLEHTSQFIEKLEKELEDFHKHLAQFKRRKEDAALESMVNS

A0A1S3C151 uncharacterized CRM domain-containing protein At3g25440, chloroplastic3.9e-17291.88Show/hide
Query:  MPRCRGLSVIAISRGSLFGFISPIRNVSPLSLLSTPTSLGQSSYGSCEHQASSRIVKSLNESTSIDCPPGFSFTRRYSMWENSGGFKGWQSVRHFSNAVM
        MPRCRG S+I ISRGSLFGF S IRN SPLSLLS PTS GQSS+GSCEHQASSRIVKSLNESTS DCPPG S T RYSMWE+ GGFK WQSVRHFSNAV+
Subjt:  MPRCRGLSVIAISRGSLFGFISPIRNVSPLSLLSTPTSLGQSSYGSCEHQASSRIVKSLNESTSIDCPPGFSFTRRYSMWENSGGFKGWQSVRHFSNAVM

Query:  ELKTDSNTVRFSFGCPTSTNGSQLKQ-KVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILT
        ELKTDSNTVRFSFG P+STNGSQLKQ KVAKTK SKK KLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEIPK  VEKYDPEILT
Subjt:  ELKTDSNTVRFSFGCPTSTNGSQLKQ-KVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILT

Query:  EEEKHYLKRTGEKRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLS
        EEEKHYLKRTGEK+KNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEEL+RLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLS
Subjt:  EEEKHYLKRTGEKRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLS

Query:  KDKALEKYRYEQSLEHTSQFIEKLEKELEDFHKHLAQFKRRKEDA
        KDKALEKYRYEQSLEHTSQFIEKLEKELEDF KHLAQFKRRKEDA
Subjt:  KDKALEKYRYEQSLEHTSQFIEKLEKELEDFHKHLAQFKRRKEDA

A0A5A7SK96 Putative CRM domain-containing protein2.1e-16592.19Show/hide
Query:  SRGSLFGFISPIRNVSPLSLLSTPTSLGQSSYGSCEHQASSRIVKSLNESTSIDCPPGFSFTRRYSMWENSGGFKGWQSVRHFSNAVMELKTDSNTVRFS
        S GSLFGF S IRN SPLSLLS PTS GQSS+GSCEHQASSRIVKSLNESTS DCPPG S T RYSMWE+ GGFK WQSVRHFSNAV+ELKTDSNTVRFS
Subjt:  SRGSLFGFISPIRNVSPLSLLSTPTSLGQSSYGSCEHQASSRIVKSLNESTSIDCPPGFSFTRRYSMWENSGGFKGWQSVRHFSNAVMELKTDSNTVRFS

Query:  FGCPTSTNGSQLKQ-KVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILTEEEKHYLKRTGE
        FG P+STNGSQLKQ KVAKTK SKK KLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEIPK  VEKYDPEILTEEEKHYLKRTGE
Subjt:  FGCPTSTNGSQLKQ-KVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILTEEEKHYLKRTGE

Query:  KRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLSKDKALEKYRYEQ
        K+KNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEEL+RLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLSKDKALEKYRYEQ
Subjt:  KRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLSKDKALEKYRYEQ

Query:  SLEHTSQFIEKLEKELEDFHKHLAQFKRRKEDA
        SLEHTSQFIEKLEKELEDF KHLAQFKRRKEDA
Subjt:  SLEHTSQFIEKLEKELEDFHKHLAQFKRRKEDA

A0A6J1HK68 uncharacterized CRM domain-containing protein At3g25440, chloroplastic5.7e-15583Show/hide
Query:  MPRCRGLSVIAISRGSLFGFISPIRNVSPLSLLSTPTSLGQSSYGSCEHQASSRIVKSLNESTSIDCPPGFSFTRRYSMWENSGGFKGWQSVRHFSNAVM
        M R   LS IAISR SL+GFIS IRNVS LSL + P+S GQSSY SCE+Q S+ I KSL ESTSI  PPGF F +RYSM E+ GGF+ WQSVRHFSN  +
Subjt:  MPRCRGLSVIAISRGSLFGFISPIRNVSPLSLLSTPTSLGQSSYGSCEHQASSRIVKSLNESTSIDCPPGFSFTRRYSMWENSGGFKGWQSVRHFSNAVM

Query:  ELKTDSNTVRFSFGCPTSTNGSQLKQ-KVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILT
        ELKTDSN VRFSFG  +STNGS  KQ KVAK K SKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFE+PK  +E YDPEILT
Subjt:  ELKTDSNTVRFSFGCPTSTNGSQLKQ-KVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILT

Query:  EEEKHYLKRTGEKRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLS
        EEEKHYLKRTGEK+KNF+LLGRRGVFGGVVLNMH+HWKKHETVKVICKPCKPGQVHEYAEEL RLSKGIVIDIKPNNSIIFYRGKNYV+PEVMSP DTLS
Subjt:  EEEKHYLKRTGEKRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLS

Query:  KDKALEKYRYEQSLEHTSQFIEKLEKELEDFHKHLAQFKRRKEDAALESMVNS
        KDKALEKY+YEQSLEHTSQFIEKLEKELEDF KHLAQFKR+KE+AALE MVNS
Subjt:  KDKALEKYRYEQSLEHTSQFIEKLEKELEDFHKHLAQFKRRKEDAALESMVNS

A0A6J1HVJ0 uncharacterized CRM domain-containing protein At3g25440, chloroplastic8.5e-15984.14Show/hide
Query:  MPRCRGLSVIAISRGSLFGFISPIRNVSPLSLLSTPTSLGQSSYGSCEHQASSRIVKSLNESTSIDCPPGFSFTRRYSMWENSGGFKGWQSVRHFSNAVM
        M R   LS IAISR SL+GFIS IRNVS LSL + PTS GQSSY SCEHQ S+ I KSL ESTSI  PPGF FT+RYSM E+ GGF+ WQSVRHFSN  +
Subjt:  MPRCRGLSVIAISRGSLFGFISPIRNVSPLSLLSTPTSLGQSSYGSCEHQASSRIVKSLNESTSIDCPPGFSFTRRYSMWENSGGFKGWQSVRHFSNAVM

Query:  ELKTDSNTVRFSFGCPTSTNGSQLKQ-KVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILT
        ELKTDSN VRFSFG  +STNGS  KQ KVAK K SKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFE+PK  +E YDPEILT
Subjt:  ELKTDSNTVRFSFGCPTSTNGSQLKQ-KVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILT

Query:  EEEKHYLKRTGEKRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLS
        EEEKHYLKRTGEK+KNFVLLGRRGVFGGVVLNMH+HWKKHETVKVICKPCKPGQVHEYAEEL RLSKGIVIDIKPNNSI+FYRGKNYVQPEVMSPPDTLS
Subjt:  EEEKHYLKRTGEKRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLS

Query:  KDKALEKYRYEQSLEHTSQFIEKLEKELEDFHKHLAQFKRRKEDAALESMVNS
        KDKALEKY+YEQSLEHTSQF+EKLEKELEDFHKHLAQFKR+KE+AA+E MVNS
Subjt:  KDKALEKYRYEQSLEHTSQFIEKLEKELEDFHKHLAQFKRRKEDAALESMVNS

SwissProt top hitse value%identityAlignment
F4J2U9 CRM-domain containing factor CFM3A, chloroplastic/mitochondrial6.7e-2038.8Show/hide
Query:  RIRYSLEKAKRKEVWLIEKLRKFEI-PKPAVEKYDPEILTEEEKHYLKRTGEKRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAE
        ++   L  A+RK +     L K E+  KPA ++ DPE +T+EE+   ++ G K K F+LLGRRGVF G V NMH+HWK  E VK+I K      V + A 
Subjt:  RIRYSLEKAKRKEVWLIEKLRKFEI-PKPAVEKYDPEILTEEEKHYLKRTGEKRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAE

Query:  ELTRLSKGIVIDI---KPNNSIIFYRGKNYVQPEVMSPPDTLSKDKAL----EKYRYEQSLEHTSQF---IEKLEKELEDFHK
         L   S GI++ I       +II YRG++Y +P ++ P + L+K KAL    E  R E  L+H S      ++L  E+E   K
Subjt:  ELTRLSKGIVIDI---KPNNSIIFYRGKNYVQPEVMSPPDTLSKDKAL----EKYRYEQSLEHTSQF---IEKLEKELEDFHK

Q2R1U8 CRM-domain containing factor CFM3, chloroplastic/mitochondrial2.6e-1934.03Show/hide
Query:  RIRYSLEKAKRKEVWLIEKLRKFEIP-KPAVEKYDPEILTEEEKHYLKRTGEKRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAE
        ++ + L+ A++K       L K E   KP      PE +T+EE+   ++ G + K F+LLGRRGVF G + NMH+HWK  E VK++ K    G V + A 
Subjt:  RIRYSLEKAKRKEVWLIEKLRKFEIP-KPAVEKYDPEILTEEEKHYLKRTGEKRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAE

Query:  ELTRLSKGIVID---IKPNNSIIFYRGKNYVQPEVMSPPDTLSKDKALEKYRYEQSLEHTSQFIEKLEKELEDFHKHLAQFKRRKEDAALE
         L   S GI++    +    +I+ +RGK+Y +P  + P + LSK KAL +    Q  E  S  I  L + ++     L Q +  KE+  +E
Subjt:  ELTRLSKGIVID---IKPNNSIIFYRGKNYVQPEVMSPPDTLSKDKALEKYRYEQSLEHTSQFIEKLEKELEDFHKHLAQFKRRKEDAALE

Q67XL4 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic1.3e-3945.45Show/hide
Query:  SQLKQKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILTEEEKHYLKRTGEKRKNFVLLGR
        ++LK+K  K    K+A +  L+ +R K KK+      E +I   L KA++KE  L+E ++K E  + A   +DPEILT EE  Y  + G K KN+V +GR
Subjt:  SQLKQKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILTEEEKHYLKRTGEKRKNFVLLGR

Query:  RGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQP--EVMSPPDTLSKDKALEKYRYEQSLEHTSQF
        RG++ GV+LNMH+HWKKH+T++V+ K   P +V E A EL RL+ GIV+D+   N+II YRGKNYVQP  E+MSP  TL + KAL+K +   +L    ++
Subjt:  RGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQP--EVMSPPDTLSKDKALEKYRYEQSLEHTSQF

Query:  IEKLEKELE
        I +LE+EL+
Subjt:  IEKLEKELE

Q8L7C2 CRM-domain containing factor CFM2, chloroplastic1.4e-2030.17Show/hide
Query:  GCPTSTNGSQLKQKVAKTKFSKKAK--LNELRLYRLKAKKKKTS----PNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILTEEEKHYLK
        G   + N  ++K +  K     +AK   + ++ +++K++++ +         +++  +LEK    E  L +   +     P +   D E +T +EK+ L+
Subjt:  GCPTSTNGSQLKQKVAKTKFSKKAK--LNELRLYRLKAKKKKTS----PNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILTEEEKHYLK

Query:  RTGEKRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIK---PNNSIIFYRGKNYVQPEVMSPPDTLSKDKAL
        + G K K F+LLGRRGVF G + NMH+HWK  E VK+IC        H+ AE L   S GI++ ++      +II YRGKNY +P+ + P   LSK +AL
Subjt:  RTGEKRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIK---PNNSIIFYRGKNYVQPEVMSPPDTLSKDKAL

Query:  EKYRYEQSLEHTSQFIEKLEKELEDFHKHLAQ
        ++    Q  +     + KL   +E+ ++ L +
Subjt:  EKYRYEQSLEHTSQFIEKLEKELEDFHKHLAQ

Q9LT57 CRM-domain containing factor CFM9, mitochondrial1.9e-3542.18Show/hide
Query:  TSTNGSQLKQKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILTEEEKHYLKRTGEKRKNF
        +++ G  ++ KV      +  K   LR  R   K KK     E R+ Y+L++AK+K   L++KL+K+++P+     +DPE+ T E+    K+ G K KN+
Subjt:  TSTNGSQLKQKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILTEEEKHYLKRTGEKRKNF

Query:  VLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLSKDKALEKYRYEQSLEHT
        V +G RGVFGGVV NMHMHWK HETV+V C      ++ E A  + RLS G+VI+I    +II +RG+NY QP+ + P +TL+K KAL K R+EQ+LE  
Subjt:  VLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLSKDKALEKYRYEQSLEHT

Query:  SQFIEKLEKEL
           I+K E++L
Subjt:  SQFIEKLEKEL

Arabidopsis top hitse value%identityAlignment
AT2G28480.1 RNA-binding CRS1 / YhbY (CRM) domain protein3.0e-5554.63Show/hide
Query:  QLKQKVAKTKFSKK-AKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILTEEEKHYLKRTGEKRKNFVLLGR
        +LK K  K +  +  A   + R   +K KKKK   N E RI+Y LEKAK KE  LIE+L+++E+ K    +  P  +T EE+ YLK+ G+KR N+V +GR
Subjt:  QLKQKVAKTKFSKK-AKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILTEEEKHYLKRTGEKRKNFVLLGR

Query:  RGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLSKDKALEKYRYEQSLEHTSQFIE
        RGVFGGV+LNMH+HWKKHETVKVIC   KPGQV +YAEEL +LS G+ ++I  +++IIFYRGK YVQP+VMSP DTLSK +A EK +YEQSLE    FI 
Subjt:  RGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLSKDKALEKYRYEQSLEHTSQFIE

Query:  KLEKELEDFHKHLAQF
          EKELE +++H+A +
Subjt:  KLEKELEDFHKHLAQF

AT3G25440.1 RNA-binding CRS1 / YhbY (CRM) domain protein9.3e-4145.45Show/hide
Query:  SQLKQKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILTEEEKHYLKRTGEKRKNFVLLGR
        ++LK+K  K    K+A +  L+ +R K KK+      E +I   L KA++KE  L+E ++K E  + A   +DPEILT EE  Y  + G K KN+V +GR
Subjt:  SQLKQKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILTEEEKHYLKRTGEKRKNFVLLGR

Query:  RGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQP--EVMSPPDTLSKDKALEKYRYEQSLEHTSQF
        RG++ GV+LNMH+HWKKH+T++V+ K   P +V E A EL RL+ GIV+D+   N+II YRGKNYVQP  E+MSP  TL + KAL+K +   +L    ++
Subjt:  RGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQP--EVMSPPDTLSKDKALEKYRYEQSLEHTSQF

Query:  IEKLEKELE
        I +LE+EL+
Subjt:  IEKLEKELE

AT3G25440.2 RNA-binding CRS1 / YhbY (CRM) domain protein9.3e-4145.45Show/hide
Query:  SQLKQKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILTEEEKHYLKRTGEKRKNFVLLGR
        ++LK+K  K    K+A +  L+ +R K KK+      E +I   L KA++KE  L+E ++K E  + A   +DPEILT EE  Y  + G K KN+V +GR
Subjt:  SQLKQKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILTEEEKHYLKRTGEKRKNFVLLGR

Query:  RGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQP--EVMSPPDTLSKDKALEKYRYEQSLEHTSQF
        RG++ GV+LNMH+HWKKH+T++V+ K   P +V E A EL RL+ GIV+D+   N+II YRGKNYVQP  E+MSP  TL + KAL+K +   +L    ++
Subjt:  RGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQP--EVMSPPDTLSKDKALEKYRYEQSLEHTSQF

Query:  IEKLEKELE
        I +LE+EL+
Subjt:  IEKLEKELE

AT3G27550.1 RNA-binding CRS1 / YhbY (CRM) domain protein1.4e-3642.18Show/hide
Query:  TSTNGSQLKQKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILTEEEKHYLKRTGEKRKNF
        +++ G  ++ KV      +  K   LR  R   K KK     E R+ Y+L++AK+K   L++KL+K+++P+     +DPE+ T E+    K+ G K KN+
Subjt:  TSTNGSQLKQKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILTEEEKHYLKRTGEKRKNF

Query:  VLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLSKDKALEKYRYEQSLEHT
        V +G RGVFGGVV NMHMHWK HETV+V C      ++ E A  + RLS G+VI+I    +II +RG+NY QP+ + P +TL+K KAL K R+EQ+LE  
Subjt:  VLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLSKDKALEKYRYEQSLEHT

Query:  SQFIEKLEKEL
           I+K E++L
Subjt:  SQFIEKLEKEL

AT4G13070.1 RNA-binding CRS1 / YhbY (CRM) domain protein4.1e-10571.38Show/hide
Query:  NSGGFKGWQSVRHFSNAVMELKTDSNTVRFSFGCPTSTNG----SQLKQKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLI
        N   + G  S R+ SN+ +EL+TD N VRF+F   +S+      ++ ++K  + K S+KAK+NELR YRLKAKKK  SPNPEVRIRY LEKAKRKE WLI
Subjt:  NSGGFKGWQSVRHFSNAVMELKTDSNTVRFSFGCPTSTNG----SQLKQKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLI

Query:  EKLRKFEIPKPAVEKYDPEILTEEEKHYLKRTGEKRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPC-KPGQVHEYAEELTRLSKGIVIDIKPNN
        EKLRK+++PK   E YDPE LTEEE+HYLKRTGEKRKNFVL+GRRGVFGGVVLN+H+HWKKHETVKVICKPC KPGQVHEYAEEL RLSKGIVID+KPNN
Subjt:  EKLRKFEIPKPAVEKYDPEILTEEEKHYLKRTGEKRKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPC-KPGQVHEYAEELTRLSKGIVIDIKPNN

Query:  SIIFYRGKNYVQPEVMSPPDTLSKDKALEKYRYEQSLEHTSQFIEKLEKELEDFHKHLAQFKRRKEDAA
        +I+ YRGKNYV+PEVMSP DTLSKDKALEKYRYEQSLEHTS+FIEKLEKELE++HK++A+ K++K++ A
Subjt:  SIIFYRGKNYVQPEVMSPPDTLSKDKALEKYRYEQSLEHTSQFIEKLEKELEDFHKHLAQFKRRKEDAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGCTGCCGCGGTCTATCTGTCATCGCCATTTCAAGGGGTTCATTGTTTGGATTCATTTCTCCGATTAGAAATGTATCACCTCTATCTTTATTGAGCACACCCAC
ATCACTTGGGCAGTCCTCATATGGAAGTTGTGAGCATCAAGCAAGTAGTCGTATAGTGAAGTCTCTCAACGAATCAACATCTATAGACTGTCCGCCTGGGTTCTCTTTTA
CTAGGAGATACAGTATGTGGGAGAACAGTGGTGGGTTTAAAGGATGGCAATCTGTTAGGCATTTTAGCAATGCCGTTATGGAGCTTAAAACAGACAGCAATACTGTCAGG
TTTTCTTTTGGTTGTCCTACTAGTACTAACGGTTCCCAACTGAAACAAAAGGTGGCAAAAACCAAATTTTCTAAGAAGGCTAAATTGAATGAACTCAGACTCTATCGTCT
TAAGGCGAAAAAGAAGAAGACATCTCCCAATCCAGAAGTTAGGATCAGATATTCCCTTGAAAAGGCCAAAAGAAAAGAAGTGTGGCTAATTGAGAAGTTGAGGAAATTTG
AGATTCCAAAACCTGCTGTAGAAAAGTATGATCCTGAAATTCTTACTGAGGAAGAGAAGCACTACTTGAAGCGTACAGGGGAGAAAAGGAAGAACTTTGTTCTGTTGGGG
AGGCGAGGAGTCTTTGGCGGAGTTGTCCTCAATATGCATATGCATTGGAAGAAGCATGAAACTGTTAAAGTTATTTGCAAACCTTGCAAGCCTGGGCAGGTTCATGAATA
TGCCGAAGAACTTACTCGATTGAGCAAAGGCATTGTGATTGACATAAAACCCAACAACAGCATAATTTTCTATCGGGGAAAGAACTATGTGCAGCCCGAAGTAATGTCAC
CTCCAGATACGCTATCAAAAGACAAGGCCTTGGAAAAATATAGGTATGAACAATCACTTGAACATACAAGCCAGTTCATTGAAAAGTTGGAGAAAGAACTTGAAGATTTT
CATAAGCATCTAGCTCAGTTCAAGAGGAGAAAGGAAGATGCTGCTTTAGAATCCATGGTTAACTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCGCTGCCGCGGTCTATCTGTCATCGCCATTTCAAGGGGTTCATTGTTTGGATTCATTTCTCCGATTAGAAATGTATCACCTCTATCTTTATTGAGCACACCCAC
ATCACTTGGGCAGTCCTCATATGGAAGTTGTGAGCATCAAGCAAGTAGTCGTATAGTGAAGTCTCTCAACGAATCAACATCTATAGACTGTCCGCCTGGGTTCTCTTTTA
CTAGGAGATACAGTATGTGGGAGAACAGTGGTGGGTTTAAAGGATGGCAATCTGTTAGGCATTTTAGCAATGCCGTTATGGAGCTTAAAACAGACAGCAATACTGTCAGG
TTTTCTTTTGGTTGTCCTACTAGTACTAACGGTTCCCAACTGAAACAAAAGGTGGCAAAAACCAAATTTTCTAAGAAGGCTAAATTGAATGAACTCAGACTCTATCGTCT
TAAGGCGAAAAAGAAGAAGACATCTCCCAATCCAGAAGTTAGGATCAGATATTCCCTTGAAAAGGCCAAAAGAAAAGAAGTGTGGCTAATTGAGAAGTTGAGGAAATTTG
AGATTCCAAAACCTGCTGTAGAAAAGTATGATCCTGAAATTCTTACTGAGGAAGAGAAGCACTACTTGAAGCGTACAGGGGAGAAAAGGAAGAACTTTGTTCTGTTGGGG
AGGCGAGGAGTCTTTGGCGGAGTTGTCCTCAATATGCATATGCATTGGAAGAAGCATGAAACTGTTAAAGTTATTTGCAAACCTTGCAAGCCTGGGCAGGTTCATGAATA
TGCCGAAGAACTTACTCGATTGAGCAAAGGCATTGTGATTGACATAAAACCCAACAACAGCATAATTTTCTATCGGGGAAAGAACTATGTGCAGCCCGAAGTAATGTCAC
CTCCAGATACGCTATCAAAAGACAAGGCCTTGGAAAAATATAGGTATGAACAATCACTTGAACATACAAGCCAGTTCATTGAAAAGTTGGAGAAAGAACTTGAAGATTTT
CATAAGCATCTAGCTCAGTTCAAGAGGAGAAAGGAAGATGCTGCTTTAGAATCCATGGTTAACTCTTGA
Protein sequenceShow/hide protein sequence
MPRCRGLSVIAISRGSLFGFISPIRNVSPLSLLSTPTSLGQSSYGSCEHQASSRIVKSLNESTSIDCPPGFSFTRRYSMWENSGGFKGWQSVRHFSNAVMELKTDSNTVR
FSFGCPTSTNGSQLKQKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEIPKPAVEKYDPEILTEEEKHYLKRTGEKRKNFVLLG
RRGVFGGVVLNMHMHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLSKDKALEKYRYEQSLEHTSQFIEKLEKELEDF
HKHLAQFKRRKEDAALESMVNS