; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0017145 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017145
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRNA-binding protein 42-like
Genome locationchr05:15482433..15498565
RNA-Seq ExpressionPI0017145
SyntenyPI0017145
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0003729 - mRNA binding (molecular function)
GO:0017069 - snRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034215 - RBM42, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029895.1 RNA-binding protein 42 [Cucurbita argyrosperma subsp. argyrosperma]3.2e-12294.07Show/hide
Query:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
        MAGPSSAPS+ SSSS SQFTYSNGSYFPLPFHLQQ+APAPA PQYPSPYVA PGPP VPLPV  VYPAPA  PA YTLPQYQQAQQLFQRDAQTITPEAL
Subjt:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL

Query:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
        ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
Subjt:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA

Query:  GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK
         ALKEMNGKYVGNRPIKLRKSNWKERTDY+AL RHKNHTQKKSKLPKKSILHK
Subjt:  GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK

XP_004152823.1 RNA-binding protein 42 [Cucumis sativus]2.6e-13299.6Show/hide
Query:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
        MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQY SPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
Subjt:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL

Query:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
        ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
Subjt:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA

Query:  GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK
        GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK
Subjt:  GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK

XP_016899517.1 PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 42 [Cucumis melo]3.1e-133100Show/hide
Query:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
        MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
Subjt:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL

Query:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
        ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
Subjt:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA

Query:  GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK
        GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK
Subjt:  GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK

XP_023545858.1 RNA-binding protein 42-like [Cucurbita pepo subsp. pepo]1.5e-12294.47Show/hide
Query:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
        MAGPSSAPS+ SSSS SQFTYSNGSYFPLPFHLQQSAPAPA PQYPSPYVA PGPP VPLPV  VYPAPA  PA YTLPQYQQAQQLFQRDAQTITPEAL
Subjt:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL

Query:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
        ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
Subjt:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA

Query:  GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK
         ALKEMNGKYVGNRPIKLRKSNWKERTDY+AL RHKNHTQKKSKLPKKSILHK
Subjt:  GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK

XP_038890923.1 RNA-binding protein 42-like [Benincasa hispida]1.3e-12696.44Show/hide
Query:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
        MAGPSSAPS+ SSSS SQFTYSNGSYFPLPFHLQQSAPA A PQYPSPYVAPPGPP VPLPVA VYP PAP PAVYTLPQYQQAQQLFQRDAQTITPEAL
Subjt:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL

Query:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
        ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
Subjt:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA

Query:  GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK
        GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK
Subjt:  GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK

TrEMBL top hitse value%identityAlignment
A0A0A0LH39 RRM domain-containing protein1.3e-13299.6Show/hide
Query:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
        MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQY SPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
Subjt:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL

Query:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
        ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
Subjt:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA

Query:  GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK
        GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK
Subjt:  GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK

A0A1S4DU47 LOW QUALITY PROTEIN: RNA-binding protein 421.5e-133100Show/hide
Query:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
        MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
Subjt:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL

Query:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
        ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
Subjt:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA

Query:  GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK
        GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK
Subjt:  GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK

A0A6J1ET57 RNA-binding protein 42-like2.0e-12294.07Show/hide
Query:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
        MAGPSS PS+ SSSS SQFTYSNGSYFPLPFHLQQSAPAPA PQYPSPYVA PGPP VPLPV  VYPAPA  PA YTLPQYQQAQQLFQRDAQTITPEAL
Subjt:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL

Query:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
        ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
Subjt:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA

Query:  GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK
         ALKEMNGKYVGNRPIKLRKSNWKERTDY+AL RHKNHTQKKSKLPKKSILHK
Subjt:  GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK

A0A6J1FBP0 RNA-binding protein 42-like7.8e-12292.89Show/hide
Query:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
        MAGP SAPS+ASSSS +QFTYSNGSYFPLPFHLQQSAPA   PQYP+PYVA P PP VPLPVA VYP PAP PA Y LPQYQQAQQLFQRDAQTITPEAL
Subjt:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL

Query:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
        ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTL EWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
Subjt:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA

Query:  GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK
        GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGR+KNHTQKKSKLPKKSILHK
Subjt:  GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK

A0A6J1KCL6 RNA-binding protein 42-like5.9e-12294.07Show/hide
Query:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL
        MAGPSSAPS+ SSSS SQFTYSNGSYFPLPFHLQQSA APA PQYPSPYVA PGPP VPLPV  VYPAPA  PA YTLPQYQQAQQLFQRDAQTITPEAL
Subjt:  MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEAL

Query:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
        ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA
Subjt:  ESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLA

Query:  GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK
         ALKEMNGKYVGNRPIKLRKSNWKERTDY+AL RHKNHTQKKSKLPKKSILHK
Subjt:  GALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK

SwissProt top hitse value%identityAlignment
A2VDB3 RNA-binding protein 426.1e-3945.26Show/hide
Query:  PLPFHLQQSAPAPAPPQYPSPYVA-PPGPPPVPLPVAPVYPAP----AP---PPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSE--------
        PL  H     P P     P P +   PGPPP P+   P  P P    AP   P  +   P    A  + + + + + P  +   K +L+  E        
Subjt:  PLPFHLQQSAPAPAPPQYPSPYVA-PPGPPPVPLPVAPVYPAP----AP---PPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSE--------

Query:  ----------IEHKAETKKKAIPRK-------AAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFS
                  +E   E KKKA P K       AAG SWED +L EW  +D+R+FCGDLGNEVNDD+L++AFSR+PSF  A+V+RDKRTGKTKGYGFVSF 
Subjt:  ----------IEHKAETKKKAIPRK-------AAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFS

Query:  NPTDLAGALKEMNGKYVGNRPIKLRKSNWKER
        +P D   A +EMNGKYVG+RPIKLRKS WK+R
Subjt:  NPTDLAGALKEMNGKYVGNRPIKLRKSNWKER

Q66KL9 RNA-binding protein 426.1e-3946.49Show/hide
Query:  PFHLQQSAPAPAPPQYPSPYVAPPGP-PPVPLPVAPVYPAPAP-----PPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSE------------
        P  L +  P P       P  AP GP PP P PV P  P   P      P VYT P  ++ ++      + + P  L   K  L+  E            
Subjt:  PFHLQQSAPAPAPPQYPSPYVAPPGP-PPVPLPVAPVYPAPAP-----PPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASSE------------

Query:  ------IEHKAETKKKAIPRK-------AAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTD
              +E   E KKK  P K       AAG SWED +L EW  +D+R+FCGDLGNEVNDD+L++AFSR+PSF  A+V+RDKRTGKTKGYGFVSF +P D
Subjt:  ------IEHKAETKKKAIPRK-------AAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTD

Query:  LAGALKEMNGKYVGNRPIKLRKSNWKER
           A++EMNGKYVG+RPIKLRKS WK+R
Subjt:  LAGALKEMNGKYVGNRPIKLRKSNWKER

Q6AXT7 RNA-binding protein 422.3e-3852.08Show/hide
Query:  APPGP----PPVPLPVAPVYPAPAPPPAVY-----TLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAETKKKAIPRK-------AAGQSWED
        AP GP    P +PL +A   P P P P         LP  +  + L  R      P   E     +A    E   E KKK  P K       AAG SWED
Subjt:  APPGP----PPVPLPVAPVYPAPAPPPAVY-----TLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAETKKKAIPRK-------AAGQSWED

Query:  PTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKER
        P+L EW  +D+R+FCGDLGNEVNDD+L++AFSRFPSF  A+V+RDKRTGKTKGYGFVSF +P+D   A++EMNGKYVG+RPIKLRKS WK+R
Subjt:  PTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKER

Q91V81 RNA-binding protein 422.3e-3852.08Show/hide
Query:  APPGP----PPVPLPVAPVYPAPAPPPAVY-----TLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAETKKKAIPRK-------AAGQSWED
        AP GP    P +PL +A   P P P P         LP  +  + L  R      P   E     +A    E   E KKK  P K       AAG SWED
Subjt:  APPGP----PPVPLPVAPVYPAPAPPPAVY-----TLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAETKKKAIPRK-------AAGQSWED

Query:  PTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKER
        P+L EW  +D+R+FCGDLGNEVNDD+L++AFSRFPSF  A+V+RDKRTGKTKGYGFVSF +P+D   A++EMNGKYVG+RPIKLRKS WK+R
Subjt:  PTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKER

Q9BTD8 RNA-binding protein 422.3e-3852.08Show/hide
Query:  APPGP----PPVPLPVAPVYPAPAPPPAVY-----TLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAETKKKAIPRK-------AAGQSWED
        AP GP    P +PL +A   P P P P         LP  +  + L  R      P   E     +A    E   E KKK  P K       AAG SWED
Subjt:  APPGP----PPVPLPVAPVYPAPAPPPAVY-----TLPQYQQAQQLFQRDAQTITPEALESVKAALASSEIEHKAETKKKAIPRK-------AAGQSWED

Query:  PTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKER
        P+L EW  +D+R+FCGDLGNEVNDD+L++AFSRFPSF  A+V+RDKRTGKTKGYGFVSF +P+D   A++EMNGKYVG+RPIKLRKS WK+R
Subjt:  PTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRKSNWKER

Arabidopsis top hitse value%identityAlignment
AT1G11650.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.2e-1244.74Show/hide
Query:  DYRLFCGDLGNEVNDDVLSKAF-SRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKL
        DY +F GDL  +V D +L + F + +PS   A+VV D+ TG+TKGYGFV FS+ ++   A+ EMNG     RP+++
Subjt:  DYRLFCGDLGNEVNDDVLSKAF-SRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKL

AT1G11650.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.2e-1244.74Show/hide
Query:  DYRLFCGDLGNEVNDDVLSKAF-SRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKL
        DY +F GDL  +V D +L + F + +PS   A+VV D+ TG+TKGYGFV FS+ ++   A+ EMNG     RP+++
Subjt:  DYRLFCGDLGNEVNDDVLSKAF-SRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKL

AT3G04500.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-9072.94Show/hide
Query:  PSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGP----PPVPLPVAPVYPAP-APPPAVYTLPQYQQAQQLFQRDAQTITPE
        PSS   S+SSSS+SQ+TY+  SY+  P+            Q P PY A P P    P   +P A VYP P  P PAVY  PQYQQA QLFQRDAQTITPE
Subjt:  PSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGP----PPVPLPVAPVYPAP-APPPAVYTLPQYQQAQQLFQRDAQTITPE

Query:  ALESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTD
        ALE+VKAALASSE EHKAETKK+AIPRKAAGQSWEDPTL+EWPENDYRLFCGDLGNEVNDDVLSKAF+RFP+FNMA+V+RDKRTGKTKGYGFVSF NP D
Subjt:  ALESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTD

Query:  LAGALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK
        LA ALKEMNGKYVGNRPIKLRKS+WKERTD EA  R K+H+ KK K  KKSILHK
Subjt:  LAGALKEMNGKYVGNRPIKLRKSNWKERTDYEALGRHKNHTQKKSKLPKKSILHK

AT3G19130.1 RNA-binding protein 47B5.9e-1346.05Show/hide
Query:  DYRLFCGDLGNEVNDDVLSKAFS-RFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKL
        D  +F GDL  +V D +L + FS R+PS   A+VV D  TG++KGYGFV F +  + + AL EMNG Y  NR +++
Subjt:  DYRLFCGDLGNEVNDDVLSKAFS-RFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKL

AT5G54900.1 RNA-binding protein 45A2.9e-1243.42Show/hide
Query:  DYRLFCGDLGNEVNDDVLSKAFSR-FPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKL
        D+ +F GDL  EV D +LS  F   + S   A+VV D+ TG++KGYGFV F++  +   A+ EMNG+Y   RP+++
Subjt:  DYRLFCGDLGNEVNDDVLSKAFSR-FPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGTCCTTCCTCGGCTCCTTCATCAGCTTCTTCCTCTTCAGCTTCCCAATTTACGTATTCAAACGGTTCTTACTTTCCTTTACCTTTCCATCTCCAGCAGTCTGC
TCCAGCACCGGCACCCCCCCAGTATCCCTCTCCCTATGTCGCTCCTCCAGGTCCTCCCCCAGTTCCCCTCCCCGTCGCACCTGTTTATCCCGCTCCTGCTCCGCCTCCGG
CTGTCTATACTCTCCCTCAATACCAGCAGGCCCAACAATTGTTTCAAAGGGATGCTCAAACCATAACCCCGGAAGCTCTTGAGAGTGTTAAAGCTGCTCTTGCAAGTAGT
GAGATCGAGCATAAAGCAGAAACAAAAAAGAAAGCTATTCCTCGCAAAGCTGCCGGGCAATCGTGGGAGGATCCAACTCTTGCTGAGTGGCCTGAAAATGATTACCGTCT
ATTTTGTGGTGATCTTGGCAATGAAGTGAATGATGACGTGCTCTCTAAAGCATTCTCACGATTTCCTTCATTTAACATGGCAAGAGTTGTTAGAGATAAGCGAACTGGTA
AAACCAAAGGCTATGGATTTGTTAGCTTTTCCAATCCTACTGACCTTGCCGGAGCACTTAAAGAAATGAATGGCAAGTACGTCGGAAATAGGCCGATAAAACTAAGAAAG
AGCAATTGGAAGGAGAGGACAGACTACGAAGCCCTAGGAAGACACAAGAATCACACACAAAAGAAATCAAAGCTTCCAAAGAAGAGTATCTTGCACAAGTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAGTTGGGTAACCTGAATCCAAAAGTTCTCAAACTTGTTTTAATTTGTAGTTTTTTTTAGTGCGGTACCCGGCAAAGCTCGCGATTTCCAGATTGAAAATCGGAGCA
TTTTCTTAATTGTCGTTGCCCATGGCGGGTCCTTCCTCGGCTCCTTCATCAGCTTCTTCCTCTTCAGCTTCCCAATTTACGTATTCAAACGGTTCTTACTTTCCTTTACC
TTTCCATCTCCAGCAGTCTGCTCCAGCACCGGCACCCCCCCAGTATCCCTCTCCCTATGTCGCTCCTCCAGGTCCTCCCCCAGTTCCCCTCCCCGTCGCACCTGTTTATC
CCGCTCCTGCTCCGCCTCCGGCTGTCTATACTCTCCCTCAATACCAGCAGGCCCAACAATTGTTTCAAAGGGATGCTCAAACCATAACCCCGGAAGCTCTTGAGAGTGTT
AAAGCTGCTCTTGCAAGTAGTGAGATCGAGCATAAAGCAGAAACAAAAAAGAAAGCTATTCCTCGCAAAGCTGCCGGGCAATCGTGGGAGGATCCAACTCTTGCTGAGTG
GCCTGAAAATGATTACCGTCTATTTTGTGGTGATCTTGGCAATGAAGTGAATGATGACGTGCTCTCTAAAGCATTCTCACGATTTCCTTCATTTAACATGGCAAGAGTTG
TTAGAGATAAGCGAACTGGTAAAACCAAAGGCTATGGATTTGTTAGCTTTTCCAATCCTACTGACCTTGCCGGAGCACTTAAAGAAATGAATGGCAAGTACGTCGGAAAT
AGGCCGATAAAACTAAGAAAGAGCAATTGGAAGGAGAGGACAGACTACGAAGCCCTAGGAAGACACAAGAATCACACACAAAAGAAATCAAAGCTTCCAAAGAAGAGTAT
CTTGCACAAGTAAAGGTCACTCACATCCTTGAATCTCTGTTTATGCCTCGAATATAATCATCAATCAAGTGTTCGTACCGTATGTCTAACCAGTGATCACAAATTTCATG
AAGGTAGTAACTGATGGAGCCTTTCTGTTCTCTGTTCCAACTCTTCCGAAATTAATGATATTGTGCGTTAGAGAGGGGATGTTTACTTTGAAGGAATAGATCTTGTAAAG
TGTTATGCATTCTCCATTTTCTTTGGAAATTTAATGAAGGAATGGAAAATTAGTTCTGTTTGAAAAATGGTAGTTAACACAACTGGTTGGACATTACTCTTGTAACGGGA
AGTGGCCGGGTTTAAATCTATTCTTGACTCATGAGAATTGAGCTGATATTGAAACTCTTATATCTACACACTTAATGATGGAAGAACCTGATTTTTGCTACTTCTATATA
TAAACACATTTGATG
Protein sequenceShow/hide protein sequence
MAGPSSAPSSASSSSASQFTYSNGSYFPLPFHLQQSAPAPAPPQYPSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQQLFQRDAQTITPEALESVKAALASS
EIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDVLSKAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGALKEMNGKYVGNRPIKLRK
SNWKERTDYEALGRHKNHTQKKSKLPKKSILHK