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PI0017147 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017147
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr09:5965056..5965427
RNA-Seq ExpressionPI0017147
SyntenyPI0017147
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046928.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-3057.38Show/hide
Query:  MSPDDIMTPRSIRMFEARPGSSGSKRKHGGQALEAAEIIRSAMKYANDQLKAIAEWPKGQRQDASVTRAEVVRQLQGMPELSRLDRARCMRILMLNVDDM
        MSPDD+M  R+ R+ E R  SSGSKRK  G A ++ +I+R+A++Y N+QL  IAEWP  QRQDA+ TR E+VR L+ +PEL+ +DR R MRILM NVDDM
Subjt:  MSPDDIMTPRSIRMFEARPGSSGSKRKHGGQALEAAEIIRSAMKYANDQLKAIAEWPKGQRQDASVTRAEVVRQLQGMPELSRLDRARCMRILMLNVDDM

Query:  KAFLDIPDEVKLDYCTIVLQDD
        KAFL++PD +K  YCT++LQ++
Subjt:  KAFLDIPDEVKLDYCTIVLQDD

KAA0048280.1 retrotransposon protein [Cucumis melo var. makuwa]3.7e-3158.2Show/hide
Query:  MSPDDIMTPRSIRMFEARPGSSGSKRKHGGQALEAAEIIRSAMKYANDQLKAIAEWPKGQRQDASVTRAEVVRQLQGMPELSRLDRARCMRILMLNVDDM
        MSPDD+M  R+ R+ E R  SSGSKRK  G A ++ +I+R+AM+Y N+QL  IAEWP  QRQDA+ TR E+VRQL+ +PEL+ +DR R MRI+M NVDDM
Subjt:  MSPDDIMTPRSIRMFEARPGSSGSKRKHGGQALEAAEIIRSAMKYANDQLKAIAEWPKGQRQDASVTRAEVVRQLQGMPELSRLDRARCMRILMLNVDDM

Query:  KAFLDIPDEVKLDYCTIVLQDD
        KAFL++PD +K  YC+I+LQ++
Subjt:  KAFLDIPDEVKLDYCTIVLQDD

KAA0054687.1 retrotransposon protein [Cucumis melo var. makuwa]6.3e-3158.2Show/hide
Query:  MSPDDIMTPRSIRMFEARPGSSGSKRKHGGQALEAAEIIRSAMKYANDQLKAIAEWPKGQRQDASVTRAEVVRQLQGMPELSRLDRARCMRILMLNVDDM
        MSPDD+M  R+ R+ E R  SSGSKRK  G A ++ +I+R+A++Y N+QL  IAEWP  QRQDA+ TR E+VRQL+ +PEL+ +DR R MRILM NVDDM
Subjt:  MSPDDIMTPRSIRMFEARPGSSGSKRKHGGQALEAAEIIRSAMKYANDQLKAIAEWPKGQRQDASVTRAEVVRQLQGMPELSRLDRARCMRILMLNVDDM

Query:  KAFLDIPDEVKLDYCTIVLQDD
        KAFL++PD +K  YC I+LQ++
Subjt:  KAFLDIPDEVKLDYCTIVLQDD

KAA0060529.1 retrotransposon protein [Cucumis melo var. makuwa]2.1e-3467.48Show/hide
Query:  MSPDDIMTPRSIRMFEARPGSSGSKRKHGGQALEAAEIIRSAMKYANDQLKAIAEWPKGQRQDASVTRAEVVRQLQGMPELSRLDRARCMRILMLNVDDM
        M  DDIM  R  R  E R GSSGSKRK GGQA+E  EIIR+ M+++ND+LKAI EW   QRQDAS    EVVRQLQ +PELSR DR R M+ILM NVDDM
Subjt:  MSPDDIMTPRSIRMFEARPGSSGSKRKHGGQALEAAEIIRSAMKYANDQLKAIAEWPKGQRQDASVTRAEVVRQLQGMPELSRLDRARCMRILMLNVDDM

Query:  KAFLDIPDEVKLDYCTIVLQDDA
        KAFLDI DE+KLDYCTI+ QD+A
Subjt:  KAFLDIPDEVKLDYCTIVLQDDA

KAA0065892.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-3058.2Show/hide
Query:  MSPDDIMTPRSIRMFEARPGSSGSKRKHGGQALEAAEIIRSAMKYANDQLKAIAEWPKGQRQDASVTRAEVVRQLQGMPELSRLDRARCMRILMLNVDDM
        MSPDD+M  R+ R+ E R  SSGSKRK  G A ++ +I+R+A++Y N+QL  IAEWP  QRQDA+ TR E+VRQL+ +PEL+ +DR R MRILM NVDDM
Subjt:  MSPDDIMTPRSIRMFEARPGSSGSKRKHGGQALEAAEIIRSAMKYANDQLKAIAEWPKGQRQDASVTRAEVVRQLQGMPELSRLDRARCMRILMLNVDDM

Query:  KAFLDIPDEVKLDYCTIVLQDD
        KAFL++PD +K  YC+I+LQ++
Subjt:  KAFLDIPDEVKLDYCTIVLQDD

TrEMBL top hitse value%identityAlignment
A0A5A7TVM3 Retrotransposon protein5.2e-3157.38Show/hide
Query:  MSPDDIMTPRSIRMFEARPGSSGSKRKHGGQALEAAEIIRSAMKYANDQLKAIAEWPKGQRQDASVTRAEVVRQLQGMPELSRLDRARCMRILMLNVDDM
        MSPDD+M  R+ R+ E R  SSGSKRK  G A ++ +I+R+A++Y N+QL  IAEWP  QRQDA+ TR E+VR L+ +PEL+ +DR R MRILM NVDDM
Subjt:  MSPDDIMTPRSIRMFEARPGSSGSKRKHGGQALEAAEIIRSAMKYANDQLKAIAEWPKGQRQDASVTRAEVVRQLQGMPELSRLDRARCMRILMLNVDDM

Query:  KAFLDIPDEVKLDYCTIVLQDD
        KAFL++PD +K  YCT++LQ++
Subjt:  KAFLDIPDEVKLDYCTIVLQDD

A0A5A7TYQ6 Retrotransposon protein1.8e-3158.2Show/hide
Query:  MSPDDIMTPRSIRMFEARPGSSGSKRKHGGQALEAAEIIRSAMKYANDQLKAIAEWPKGQRQDASVTRAEVVRQLQGMPELSRLDRARCMRILMLNVDDM
        MSPDD+M  R+ R+ E R  SSGSKRK  G A ++ +I+R+AM+Y N+QL  IAEWP  QRQDA+ TR E+VRQL+ +PEL+ +DR R MRI+M NVDDM
Subjt:  MSPDDIMTPRSIRMFEARPGSSGSKRKHGGQALEAAEIIRSAMKYANDQLKAIAEWPKGQRQDASVTRAEVVRQLQGMPELSRLDRARCMRILMLNVDDM

Query:  KAFLDIPDEVKLDYCTIVLQDD
        KAFL++PD +K  YC+I+LQ++
Subjt:  KAFLDIPDEVKLDYCTIVLQDD

A0A5A7UJB1 Retrotransposon protein3.1e-3158.2Show/hide
Query:  MSPDDIMTPRSIRMFEARPGSSGSKRKHGGQALEAAEIIRSAMKYANDQLKAIAEWPKGQRQDASVTRAEVVRQLQGMPELSRLDRARCMRILMLNVDDM
        MSPDD+M  R+ R+ E R  SSGSKRK  G A ++ +I+R+A++Y N+QL  IAEWP  QRQDA+ TR E+VRQL+ +PEL+ +DR R MRILM NVDDM
Subjt:  MSPDDIMTPRSIRMFEARPGSSGSKRKHGGQALEAAEIIRSAMKYANDQLKAIAEWPKGQRQDASVTRAEVVRQLQGMPELSRLDRARCMRILMLNVDDM

Query:  KAFLDIPDEVKLDYCTIVLQDD
        KAFL++PD +K  YC I+LQ++
Subjt:  KAFLDIPDEVKLDYCTIVLQDD

A0A5A7V469 Retrotransposon protein1.0e-3467.48Show/hide
Query:  MSPDDIMTPRSIRMFEARPGSSGSKRKHGGQALEAAEIIRSAMKYANDQLKAIAEWPKGQRQDASVTRAEVVRQLQGMPELSRLDRARCMRILMLNVDDM
        M  DDIM  R  R  E R GSSGSKRK GGQA+E  EIIR+ M+++ND+LKAI EW   QRQDAS    EVVRQLQ +PELSR DR R M+ILM NVDDM
Subjt:  MSPDDIMTPRSIRMFEARPGSSGSKRKHGGQALEAAEIIRSAMKYANDQLKAIAEWPKGQRQDASVTRAEVVRQLQGMPELSRLDRARCMRILMLNVDDM

Query:  KAFLDIPDEVKLDYCTIVLQDDA
        KAFLDI DE+KLDYCTI+ QD+A
Subjt:  KAFLDIPDEVKLDYCTIVLQDDA

A0A5A7VB43 Retrotransposon protein5.2e-3157.38Show/hide
Query:  MSPDDIMTPRSIRMFEARPGSSGSKRKHGGQALEAAEIIRSAMKYANDQLKAIAEWPKGQRQDASVTRAEVVRQLQGMPELSRLDRARCMRILMLNVDDM
        MSPDD+M  R+ R+ E R  SSGSKRK  G A ++ +I+R+A++Y N+QL  IAEWP  QRQDA+ TR E+VR L+ +PEL+ +DR R MRILM NVDDM
Subjt:  MSPDDIMTPRSIRMFEARPGSSGSKRKHGGQALEAAEIIRSAMKYANDQLKAIAEWPKGQRQDASVTRAEVVRQLQGMPELSRLDRARCMRILMLNVDDM

Query:  KAFLDIPDEVKLDYCTIVLQDD
        KAFL++PD +K  YCT++LQ++
Subjt:  KAFLDIPDEVKLDYCTIVLQDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACCTGACGACATAATGACTCCAAGATCGATTCGTATGTTTGAGGCTAGGCCTGGTTCGAGCGGGTCGAAGAGGAAACATGGAGGGCAGGCATTGGAGGCGGCTGA
AATTATTCGCAGTGCCATGAAATATGCCAATGACCAACTTAAGGCCATTGCAGAATGGCCCAAGGGACAACGGCAAGATGCAAGTGTGACACGTGCGGAAGTCGTTAGAC
AGCTACAAGGAATGCCGGAGCTGAGTCGACTAGATAGGGCTCGTTGTATGCGCATATTGATGCTCAACGTGGATGACATGAAAGCATTTTTAGACATCCCGGACGAGGTT
AAGTTGGATTACTGCACGATCGTACTCCAAGATGACGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCACCTGACGACATAATGACTCCAAGATCGATTCGTATGTTTGAGGCTAGGCCTGGTTCGAGCGGGTCGAAGAGGAAACATGGAGGGCAGGCATTGGAGGCGGCTGA
AATTATTCGCAGTGCCATGAAATATGCCAATGACCAACTTAAGGCCATTGCAGAATGGCCCAAGGGACAACGGCAAGATGCAAGTGTGACACGTGCGGAAGTCGTTAGAC
AGCTACAAGGAATGCCGGAGCTGAGTCGACTAGATAGGGCTCGTTGTATGCGCATATTGATGCTCAACGTGGATGACATGAAAGCATTTTTAGACATCCCGGACGAGGTT
AAGTTGGATTACTGCACGATCGTACTCCAAGATGACGCTTGA
Protein sequenceShow/hide protein sequence
MSPDDIMTPRSIRMFEARPGSSGSKRKHGGQALEAAEIIRSAMKYANDQLKAIAEWPKGQRQDASVTRAEVVRQLQGMPELSRLDRARCMRILMLNVDDMKAFLDIPDEV
KLDYCTIVLQDDA