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PI0017187 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017187
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr02:16767583..16768830
RNA-Seq ExpressionPI0017187
SyntenyPI0017187
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025356.1 hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa]1.7e-5044.94Show/hide
Query:  MTPTHEREVKEHREQSDSSRSDRHWKRPSKKAKAS----------------------------------------GPHVVDSTLEEVGTSKTPVVRPVEQ
        M P  E EVKEH+++SDSS+SDRHWKRP KKA+ S                                        GPH VD   EEVGTSKTPV +P EQ
Subjt:  MTPTHEREVKEHREQSDSSRSDRHWKRPSKKAKAS----------------------------------------GPHVVDSTLEEVGTSKTPVVRPVEQ

Query:  PSRPPAVLEEICRDKM------------------------------------------------------------------------------------
          RP A+LEEI R KM                                                                                    
Subjt:  PSRPPAVLEEICRDKM------------------------------------------------------------------------------------

Query:  ----------KLLLMDKTRQLDEKTPAIKEALTLMDQLREDAKVIQERATKLSLEKKELEGRLQSINTESEQLSILSCEKNEAIDRKELEVAKLQDEAKA
                   LL  DKTRQL+EKT AIKEALTL+ QLR DAKVIQER  +LSLE+KELE RL+SINTESEQLSILSCEK EAID++ELEVAKLQDE   
Subjt:  ----------KLLLMDKTRQLDEKTPAIKEALTLMDQLREDAKVIQERATKLSLEKKELEGRLQSINTESEQLSILSCEKNEAIDRKELEVAKLQDEAKA

Query:  LESTPTITEEATEALATVRKSMEVAREEFRNFKWKL
        LESTP ITEEA EALA+VR+SME AREEF+NFKW+L
Subjt:  LESTPTITEEATEALATVRKSMEVAREEFRNFKWKL

KAA0046555.1 hypothetical protein E6C27_scaffold114G00780 [Cucumis melo var. makuwa]1.4e-4744.85Show/hide
Query:  MTPTHEREVKEHREQSDSSRSDRHWKRPSKKAKAS------------------------------------GPHVVDSTLEEVGTSKTPVVRPVEQPSRP
        M P  E EVKEH+++SDSS+SD HWKRP KKAK S                                    GPH V ST EEVGTSKTPV +  EQ  RP
Subjt:  MTPTHEREVKEHREQSDSSRSDRHWKRPSKKAKAS------------------------------------GPHVVDSTLEEVGTSKTPVVRPVEQPSRP

Query:  PAVLEEICRDKM----------------------------------------------------------------------------------------
         A+LEEI R KM                                                                                        
Subjt:  PAVLEEICRDKM----------------------------------------------------------------------------------------

Query:  ----KLLLMDKTRQLDEKTPAIKEALTLMDQLREDAKVIQERATKLSLEKKELEGRLQSINTESEQLSILSCEKNEAIDRKELEVAKLQDEAKALESTPT
            +LL  DKTRQL+EKT AIKEALTL+ +LR D KVIQER  +LSLE+KELE RL+SIN ESEQLSILSCEK EAID++ELEVAKLQDE   LESTP 
Subjt:  ----KLLLMDKTRQLDEKTPAIKEALTLMDQLREDAKVIQERATKLSLEKKELEGRLQSINTESEQLSILSCEKNEAIDRKELEVAKLQDEAKALESTPT

Query:  ITEEATEALATVRKSMEVAREEFRNFKWKL
        ITEEA EALATV +SME AREEF+NFKW+L
Subjt:  ITEEATEALATVRKSMEVAREEFRNFKWKL

KAA0054406.1 hypothetical protein E6C27_scaffold24G001560 [Cucumis melo var. makuwa]3.6e-4846.28Show/hide
Query:  MTPTHEREVKEHREQSDSSRSDRHWKRPSKKAKAS------------------------------------GPHVVDSTLEEVGTSKTPVVRPVEQPSRP
        M PT E EVKEH+++SDS++SD HWKR  KKAK S                                    GP+ VDS +EEVGT  TPV +P EQ  RP
Subjt:  MTPTHEREVKEHREQSDSSRSDRHWKRPSKKAKAS------------------------------------GPHVVDSTLEEVGTSKTPVVRPVEQPSRP

Query:  PAVLEEICRDKMK-----------------------------------------------------------------------LLLMDKTRQLDEKTPA
         A+L+EI R KMK                                                                       LL  DK RQLDEKT  
Subjt:  PAVLEEICRDKMK-----------------------------------------------------------------------LLLMDKTRQLDEKTPA

Query:  IKEALTLMDQLREDAKVIQERATKLSLEKKELEGRLQSINTESEQLSILSCEKNEAIDRKELEVAKLQDEAKALESTPTITEEATEALATVRKSMEVARE
        IKEALTLMDQLR D KVIQE   +LSLE KELE RLQSIN E EQLSIL CEK E ID+++LEVAKL DE   LESTP ITEEA E LA VRKSMEVA E
Subjt:  IKEALTLMDQLREDAKVIQERATKLSLEKKELEGRLQSINTESEQLSILSCEKNEAIDRKELEVAKLQDEAKALESTPTITEEATEALATVRKSMEVARE

Query:  EFRNFKWKL
        EF+NFKWKL
Subjt:  EFRNFKWKL

TYK02261.1 hypothetical protein E5676_scaffold18G00620 [Cucumis melo var. makuwa]4.4e-4640.88Show/hide
Query:  MTPTHEREVKEHREQSDSSRSDRHWKRPSKK--------------------------AKASGPHVVDSTLEEVGTSKTPVVRPVEQPSRPPAVLEEICRD
        M P  E EVKEH+++SDSS+SD HWKRP K+                             +GPH VDST EEVGTSKTPV +P EQ  RP A+LEEI R 
Subjt:  MTPTHEREVKEHREQSDSSRSDRHWKRPSKK--------------------------AKASGPHVVDSTLEEVGTSKTPVVRPVEQPSRPPAVLEEICRD

Query:  KM--------------------------------------------------------------------------------------------------
        KM                                                                                                  
Subjt:  KM--------------------------------------------------------------------------------------------------

Query:  ------------------------------------KLLLMDKTRQLDEKTPAIKEALTLMDQLREDAKVIQERATKLSLEKKELEGRLQSINTESEQLS
                                            +LL MDK RQL+EKT AIKEALTL+ QLR DAKVIQER  +LSLE+KELE RL+SIN ESEQLS
Subjt:  ------------------------------------KLLLMDKTRQLDEKTPAIKEALTLMDQLREDAKVIQERATKLSLEKKELEGRLQSINTESEQLS

Query:  ILSCEKNEAIDRKELEVAKLQDEAKALESTPTITEEATEALATVRKSMEVAREEFRNFKWKL
        ILSCEK EAID++ELEVAKL+DE   LESTP ITEEA EALATVR+SME AREEF+NFKW+L
Subjt:  ILSCEKNEAIDRKELEVAKLQDEAKALESTPTITEEATEALATVRKSMEVAREEFRNFKWKL

TYK15844.1 hypothetical protein E5676_scaffold637G00190 [Cucumis melo var. makuwa]1.4e-4747.8Show/hide
Query:  MTPTHEREVKEHREQSDSSRSDRHWKRPSKKAKASG------------------------------------PHVVDSTLEEVGTSKTPVVRPVEQPSRP
        M PT E E+KEH ++SDSS++D HWKRP KKA  SG                                    PH VDST+ EVGTSKT V +P +Q  R 
Subjt:  MTPTHEREVKEHREQSDSSRSDRHWKRPSKKAKASG------------------------------------PHVVDSTLEEVGTSKTPVVRPVEQPSRP

Query:  PAVLEEICRDKM----------------------------------------------------------KLLLMDKTRQLDEKTPAIKEALTLMDQLRE
          + EEI  DKM                                                          KLL  DK RQLDEKT  IKE LTLMDQL+ 
Subjt:  PAVLEEICRDKM----------------------------------------------------------KLLLMDKTRQLDEKTPAIKEALTLMDQLRE

Query:  DAKVIQERATKLSLEKKELEGRLQSINTESEQLSILSCEKNEAIDRKELEVAKLQDEAKALESTPTITEEATEALATVRKSMEVAREEFRNFKWK
        DAKVIQ+RA +LSL KKELE RLQSIN +SEQLSILSCEK EAID+ +LEVAKLQDE   LESTPTIT+E  EALA VRKSME AREEF+NF  K
Subjt:  DAKVIQERATKLSLEKKELEGRLQSINTESEQLSILSCEKNEAIDRKELEVAKLQDEAKALESTPTITEEATEALATVRKSMEVAREEFRNFKWK

TrEMBL top hitse value%identityAlignment
A0A5A7SHN8 PMD domain-containing protein8.4e-5144.94Show/hide
Query:  MTPTHEREVKEHREQSDSSRSDRHWKRPSKKAKAS----------------------------------------GPHVVDSTLEEVGTSKTPVVRPVEQ
        M P  E EVKEH+++SDSS+SDRHWKRP KKA+ S                                        GPH VD   EEVGTSKTPV +P EQ
Subjt:  MTPTHEREVKEHREQSDSSRSDRHWKRPSKKAKAS----------------------------------------GPHVVDSTLEEVGTSKTPVVRPVEQ

Query:  PSRPPAVLEEICRDKM------------------------------------------------------------------------------------
          RP A+LEEI R KM                                                                                    
Subjt:  PSRPPAVLEEICRDKM------------------------------------------------------------------------------------

Query:  ----------KLLLMDKTRQLDEKTPAIKEALTLMDQLREDAKVIQERATKLSLEKKELEGRLQSINTESEQLSILSCEKNEAIDRKELEVAKLQDEAKA
                   LL  DKTRQL+EKT AIKEALTL+ QLR DAKVIQER  +LSLE+KELE RL+SINTESEQLSILSCEK EAID++ELEVAKLQDE   
Subjt:  ----------KLLLMDKTRQLDEKTPAIKEALTLMDQLREDAKVIQERATKLSLEKKELEGRLQSINTESEQLSILSCEKNEAIDRKELEVAKLQDEAKA

Query:  LESTPTITEEATEALATVRKSMEVAREEFRNFKWKL
        LESTP ITEEA EALA+VR+SME AREEF+NFKW+L
Subjt:  LESTPTITEEATEALATVRKSMEVAREEFRNFKWKL

A0A5A7TYW3 Uncharacterized protein6.6e-4844.85Show/hide
Query:  MTPTHEREVKEHREQSDSSRSDRHWKRPSKKAKAS------------------------------------GPHVVDSTLEEVGTSKTPVVRPVEQPSRP
        M P  E EVKEH+++SDSS+SD HWKRP KKAK S                                    GPH V ST EEVGTSKTPV +  EQ  RP
Subjt:  MTPTHEREVKEHREQSDSSRSDRHWKRPSKKAKAS------------------------------------GPHVVDSTLEEVGTSKTPVVRPVEQPSRP

Query:  PAVLEEICRDKM----------------------------------------------------------------------------------------
         A+LEEI R KM                                                                                        
Subjt:  PAVLEEICRDKM----------------------------------------------------------------------------------------

Query:  ----KLLLMDKTRQLDEKTPAIKEALTLMDQLREDAKVIQERATKLSLEKKELEGRLQSINTESEQLSILSCEKNEAIDRKELEVAKLQDEAKALESTPT
            +LL  DKTRQL+EKT AIKEALTL+ +LR D KVIQER  +LSLE+KELE RL+SIN ESEQLSILSCEK EAID++ELEVAKLQDE   LESTP 
Subjt:  ----KLLLMDKTRQLDEKTPAIKEALTLMDQLREDAKVIQERATKLSLEKKELEGRLQSINTESEQLSILSCEKNEAIDRKELEVAKLQDEAKALESTPT

Query:  ITEEATEALATVRKSMEVAREEFRNFKWKL
        ITEEA EALATV +SME AREEF+NFKW+L
Subjt:  ITEEATEALATVRKSMEVAREEFRNFKWKL

A0A5A7UJE9 Uncharacterized protein1.7e-4846.28Show/hide
Query:  MTPTHEREVKEHREQSDSSRSDRHWKRPSKKAKAS------------------------------------GPHVVDSTLEEVGTSKTPVVRPVEQPSRP
        M PT E EVKEH+++SDS++SD HWKR  KKAK S                                    GP+ VDS +EEVGT  TPV +P EQ  RP
Subjt:  MTPTHEREVKEHREQSDSSRSDRHWKRPSKKAKAS------------------------------------GPHVVDSTLEEVGTSKTPVVRPVEQPSRP

Query:  PAVLEEICRDKMK-----------------------------------------------------------------------LLLMDKTRQLDEKTPA
         A+L+EI R KMK                                                                       LL  DK RQLDEKT  
Subjt:  PAVLEEICRDKMK-----------------------------------------------------------------------LLLMDKTRQLDEKTPA

Query:  IKEALTLMDQLREDAKVIQERATKLSLEKKELEGRLQSINTESEQLSILSCEKNEAIDRKELEVAKLQDEAKALESTPTITEEATEALATVRKSMEVARE
        IKEALTLMDQLR D KVIQE   +LSLE KELE RLQSIN E EQLSIL CEK E ID+++LEVAKL DE   LESTP ITEEA E LA VRKSMEVA E
Subjt:  IKEALTLMDQLREDAKVIQERATKLSLEKKELEGRLQSINTESEQLSILSCEKNEAIDRKELEVAKLQDEAKALESTPTITEEATEALATVRKSMEVARE

Query:  EFRNFKWKL
        EF+NFKWKL
Subjt:  EFRNFKWKL

A0A5A7V4F4 PMD domain-containing protein2.1e-4640.88Show/hide
Query:  MTPTHEREVKEHREQSDSSRSDRHWKRPSKK--------------------------AKASGPHVVDSTLEEVGTSKTPVVRPVEQPSRPPAVLEEICRD
        M P  E EVKEH+++SDSS+SD HWKRP K+                             +GPH VDST EEVGTSKTPV +P EQ  RP A+LEEI R 
Subjt:  MTPTHEREVKEHREQSDSSRSDRHWKRPSKK--------------------------AKASGPHVVDSTLEEVGTSKTPVVRPVEQPSRPPAVLEEICRD

Query:  KM--------------------------------------------------------------------------------------------------
        KM                                                                                                  
Subjt:  KM--------------------------------------------------------------------------------------------------

Query:  ------------------------------------KLLLMDKTRQLDEKTPAIKEALTLMDQLREDAKVIQERATKLSLEKKELEGRLQSINTESEQLS
                                            +LL MDK RQL+EKT AIKEALTL+ QLR DAKVIQER  +LSLE+KELE RL+SIN ESEQLS
Subjt:  ------------------------------------KLLLMDKTRQLDEKTPAIKEALTLMDQLREDAKVIQERATKLSLEKKELEGRLQSINTESEQLS

Query:  ILSCEKNEAIDRKELEVAKLQDEAKALESTPTITEEATEALATVRKSMEVAREEFRNFKWKL
        ILSCEK EAID++ELEVAKL+DE   LESTP ITEEA EALATVR+SME AREEF+NFKW+L
Subjt:  ILSCEKNEAIDRKELEVAKLQDEAKALESTPTITEEATEALATVRKSMEVAREEFRNFKWKL

A0A5D3CY14 Uncharacterized protein6.6e-4847.8Show/hide
Query:  MTPTHEREVKEHREQSDSSRSDRHWKRPSKKAKASG------------------------------------PHVVDSTLEEVGTSKTPVVRPVEQPSRP
        M PT E E+KEH ++SDSS++D HWKRP KKA  SG                                    PH VDST+ EVGTSKT V +P +Q  R 
Subjt:  MTPTHEREVKEHREQSDSSRSDRHWKRPSKKAKASG------------------------------------PHVVDSTLEEVGTSKTPVVRPVEQPSRP

Query:  PAVLEEICRDKM----------------------------------------------------------KLLLMDKTRQLDEKTPAIKEALTLMDQLRE
          + EEI  DKM                                                          KLL  DK RQLDEKT  IKE LTLMDQL+ 
Subjt:  PAVLEEICRDKM----------------------------------------------------------KLLLMDKTRQLDEKTPAIKEALTLMDQLRE

Query:  DAKVIQERATKLSLEKKELEGRLQSINTESEQLSILSCEKNEAIDRKELEVAKLQDEAKALESTPTITEEATEALATVRKSMEVAREEFRNFKWK
        DAKVIQ+RA +LSL KKELE RLQSIN +SEQLSILSCEK EAID+ +LEVAKLQDE   LESTPTIT+E  EALA VRKSME AREEF+NF  K
Subjt:  DAKVIQERATKLSLEKKELEGRLQSINTESEQLSILSCEKNEAIDRKELEVAKLQDEAKALESTPTITEEATEALATVRKSMEVAREEFRNFKWK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCCTACCCACGAAAGGGAGGTCAAGGAGCATAGAGAGCAGAGCGATAGCAGCAGAAGCGACCGTCATTGGAAGAGACCTTCGAAGAAAGCAAAGGCATCAGGGCC
CCATGTCGTGGATTCGACTCTTGAAGAAGTTGGTACTTCAAAGACACCAGTTGTCAGACCAGTTGAACAACCCTCGCGTCCTCCTGCTGTTCTCGAGGAGATTTGTCGGG
ACAAGATGAAGCTGCTGTTGATGGATAAAACTCGTCAATTGGACGAGAAGACACCTGCCATCAAAGAAGCCTTGACTTTGATGGACCAACTACGAGAAGATGCCAAAGTT
ATTCAGGAGAGGGCTACGAAGTTATCCTTGGAAAAGAAAGAACTGGAGGGCAGACTTCAGAGTATAAATACTGAGTCTGAACAACTATCCATCTTATCTTGTGAGAAAAA
TGAGGCTATAGATAGGAAGGAACTAGAGGTTGCTAAGCTCCAAGATGAAGCCAAGGCTCTTGAAAGCACCCCTACTATTACCGAAGAAGCCACTGAGGCCTTGGCTACGG
TTCGTAAGAGTATGGAGGTCGCACGCGAAGAATTCAGGAACTTTAAGTGGAAGCTTAGACTTTGCCCCCCCTTTGCCCCCATTTTATTTCTTTATTGTCTTTGCTGTAAA
TGCGACATTTTAGTGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGACTCCTACCCACGAAAGGGAGGTCAAGGAGCATAGAGAGCAGAGCGATAGCAGCAGAAGCGACCGTCATTGGAAGAGACCTTCGAAGAAAGCAAAGGCATCAGGGCC
CCATGTCGTGGATTCGACTCTTGAAGAAGTTGGTACTTCAAAGACACCAGTTGTCAGACCAGTTGAACAACCCTCGCGTCCTCCTGCTGTTCTCGAGGAGATTTGTCGGG
ACAAGATGAAGCTGCTGTTGATGGATAAAACTCGTCAATTGGACGAGAAGACACCTGCCATCAAAGAAGCCTTGACTTTGATGGACCAACTACGAGAAGATGCCAAAGTT
ATTCAGGAGAGGGCTACGAAGTTATCCTTGGAAAAGAAAGAACTGGAGGGCAGACTTCAGAGTATAAATACTGAGTCTGAACAACTATCCATCTTATCTTGTGAGAAAAA
TGAGGCTATAGATAGGAAGGAACTAGAGGTTGCTAAGCTCCAAGATGAAGCCAAGGCTCTTGAAAGCACCCCTACTATTACCGAAGAAGCCACTGAGGCCTTGGCTACGG
TTCGTAAGAGTATGGAGGTCGCACGCGAAGAATTCAGGAACTTTAAGTGGAAGCTTAGACTTTGCCCCCCCTTTGCCCCCATTTTATTTCTTTATTGTCTTTGCTGTAAA
TGCGACATTTTAGTGGAATGA
Protein sequenceShow/hide protein sequence
MTPTHEREVKEHREQSDSSRSDRHWKRPSKKAKASGPHVVDSTLEEVGTSKTPVVRPVEQPSRPPAVLEEICRDKMKLLLMDKTRQLDEKTPAIKEALTLMDQLREDAKV
IQERATKLSLEKKELEGRLQSINTESEQLSILSCEKNEAIDRKELEVAKLQDEAKALESTPTITEEATEALATVRKSMEVAREEFRNFKWKLRLCPPFAPILFLYCLCCK
CDILVE