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PI0017221 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017221
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTNFR/CD27/30/40/95 cysteine-rich region
Genome locationchr12:12597197..12597502
RNA-Seq ExpressionPI0017221
SyntenyPI0017221
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE9594738.1 hypothetical protein Lalb_Chr18g0056941 [Lupinus albus]5.1e-1856.76Show/hide
Query:  TVAC-PADGKVCGDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGSAWASLASCKQCIFKCKCKC
        T+ C PADG  C DCI N+M+ DCP+C P L CMA+CLWGG SRS C+N C+  +A+ +L+ CK+C+ KCKC C
Subjt:  TVAC-PADGKVCGDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGSAWASLASCKQCIFKCKCKC

KAG6573550.1 hypothetical protein SDJN03_27437, partial [Cucurbita argyrosperma subsp. sororia]1.8e-3172.04Show/hide
Query:  SLLFAAAILMTAVWMTVACPADGKVCGDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGSAWASLASCKQCIFKCKCKCSSSSS
        S + AA ILMTA+ +T  CPAD K+CGDCIR+RM   CPACAPPLRCMAQCLWGGGSRSRCV +CDSG AWA L SCK+C++ CKC C+SSSS
Subjt:  SLLFAAAILMTAVWMTVACPADGKVCGDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGSAWASLASCKQCIFKCKCKCSSSSS

KAG6573554.1 hypothetical protein SDJN03_27441, partial [Cucurbita argyrosperma subsp. sororia]6.4e-2967.74Show/hide
Query:  SLLFAAAILMTAVWMTVACPADGKVCGDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGSAWASLASCKQCIFKCKCKCSSSSS
        S + A  ILMT + +T  C AD K+CGDCIR+RM   CPACAPPLRCMAQCLWGGGSRSRCV +CD G AWA L SCK+C++ CKC C+SSSS
Subjt:  SLLFAAAILMTAVWMTVACPADGKVCGDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGSAWASLASCKQCIFKCKCKCSSSSS

KAG7012656.1 hypothetical protein SDJN02_25409, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-3071.91Show/hide
Query:  AAAILMTAVWMTVACPADGKVCGDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGSAWASLASCKQCIFKCKCKCSSSSS
        AA ILMTA+ +T  CP D K+CGDCIR+RM   CPACAPPLRCMAQCLWGGGSRSRCV +CD G AWA L SCK+C++ CKC C+SSSS
Subjt:  AAAILMTAVWMTVACPADGKVCGDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGSAWASLASCKQCIFKCKCKCSSSSS

XP_030471211.1 uncharacterized protein LOC115689343 [Syzygium oleosum]5.1e-1847.87Show/hide
Query:  SLLFAAAILMTAVWM------TVACPADGKVCGDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGSAWASLASCKQCIFKCKCKC
        S L    ++M  +W+       VACP+DG  C DCI NR+   CP+C P LRCM QCLWGG SR++C  RCD       L+ CK+C+ KCKC C
Subjt:  SLLFAAAILMTAVWM------TVACPADGKVCGDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGSAWASLASCKQCIFKCKCKC

TrEMBL top hitse value%identityAlignment
A0A0A0LW71 Uncharacterized protein7.3e-3983.51Show/hide
Query:  MAARSL-LFAAAILMTAVWMTVACPADGKVCGDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGSAWASLASCKQCIFKCKCKCSSSS
        MA RSL +    ILMTAVW+TV CPA+GKVC DCIRNRME+DCPACAPPLRCMAQCLWGG SRSRCVNRCDSG AWASLASCKQCI KCKC+CSSSS
Subjt:  MAARSL-LFAAAILMTAVWMTVACPADGKVCGDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGSAWASLASCKQCIFKCKCKCSSSS

A0A166H086 Uncharacterized protein7.1e-1856.76Show/hide
Query:  VACPADGKVCGDCIRNRMERDCPACAPPLRCMAQCLWGGG-SRSRCVNRCDSGSAWASLASCKQCIFKCKCKCS
        +ACPADG  C DCI NRM+ DCPACAP +RCMAQCLW  G S+ +CV +CD    +  ++ CK+C+ +CKC CS
Subjt:  VACPADGKVCGDCIRNRMERDCPACAPPLRCMAQCLWGGG-SRSRCVNRCDSGSAWASLASCKQCIFKCKCKCS

A0A438FE46 Uncharacterized protein9.3e-1846.81Show/hide
Query:  SLLFAAAILMTAVWMTVA----CPADGKVCGDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGSAWASLASCKQCIFKCKCKCSS
        S + A  +L+   W+ ++    CP+DG  C DCI N+M   CP+CAP LRCMA+CLWGG S+S+CV RCD       L+ CK+C+ +CKC C +
Subjt:  SLLFAAAILMTAVWMTVA----CPADGKVCGDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGSAWASLASCKQCIFKCKCKCSS

A0A5E4FT66 PREDICTED: MIMGU_mgv11b015169mg9.3e-1848.94Show/hide
Query:  AARSLLFAAAILMTAVWMTVACPADGKVCGDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGSAW-ASLASCKQCIFKCKCKCSS
        AA  L+    +L   V+  +ACP+DG  CGDC+ N+M+  CP C P LRCMA+CLW G SR+ CV RC+ GS    +L+ CK+C+ +CKC C S
Subjt:  AARSLLFAAAILMTAVWMTVACPADGKVCGDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGSAW-ASLASCKQCIFKCKCKCSS

A0A6A4P6C6 Uncharacterized protein2.4e-1856.76Show/hide
Query:  TVAC-PADGKVCGDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGSAWASLASCKQCIFKCKCKC
        T+ C PADG  C DCI N+M+ DCP+C P L CMA+CLWGG SRS C+N C+  +A+ +L+ CK+C+ KCKC C
Subjt:  TVAC-PADGKVCGDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGSAWASLASCKQCIFKCKCKC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G12064.1 unknown protein4.0e-1340.82Show/hide
Query:  SLLFAAAILM----TAVWMTVAC--PADGKVCGDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVN--RCDSGSAWASLASCKQCIFKCKCKCSS
        SL+F   +L+     AV     C  P     C  C+  +M+ DCP C P LRCMA+CLWGG ++ +C    RCD+ +A  SL  CK+C+ +CKC C++
Subjt:  SLLFAAAILM----TAVWMTVAC--PADGKVCGDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVN--RCDSGSAWASLASCKQCIFKCKCKCSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCAGATCATTACTATTCGCGGCGGCGATTTTGATGACCGCCGTCTGGATGACGGTGGCTTGTCCAGCGGACGGCAAGGTGTGCGGCGACTGCATCAGGAACAG
GATGGAGCGGGACTGCCCGGCGTGTGCTCCGCCCCTGCGTTGCATGGCACAATGCCTTTGGGGCGGTGGTTCGAGGTCGAGGTGTGTTAATCGATGCGATTCCGGCAGCG
CGTGGGCGAGCTTGGCAAGCTGCAAGCAGTGCATTTTCAAATGCAAGTGCAAGTGCAGTTCTTCTTCTTCTTTGATGTGTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCAGATCATTACTATTCGCGGCGGCGATTTTGATGACCGCCGTCTGGATGACGGTGGCTTGTCCAGCGGACGGCAAGGTGTGCGGCGACTGCATCAGGAACAG
GATGGAGCGGGACTGCCCGGCGTGTGCTCCGCCCCTGCGTTGCATGGCACAATGCCTTTGGGGCGGTGGTTCGAGGTCGAGGTGTGTTAATCGATGCGATTCCGGCAGCG
CGTGGGCGAGCTTGGCAAGCTGCAAGCAGTGCATTTTCAAATGCAAGTGCAAGTGCAGTTCTTCTTCTTCTTTGATGTGTAATTAA
Protein sequenceShow/hide protein sequence
MAARSLLFAAAILMTAVWMTVACPADGKVCGDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGSAWASLASCKQCIFKCKCKCSSSSSLMCN