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PI0017223 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017223
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposable element Tf2
Genome locationchr05:14199876..14200511
RNA-Seq ExpressionPI0017223
SyntenyPI0017223
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025901.1 hypothetical protein E6C27_scaffold34G001890 [Cucumis melo var. makuwa]6.3e-2281.43Show/hide
Query:  DKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKS
        +KY+FQHATIKH+KEWF ENGYLQD+DQ KN +FLN+KSKLLA LAQATTDADFQRLL T VNAS+SSKS
Subjt:  DKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKS

KAA0034823.1 hypothetical protein E6C27_scaffold213G00570 [Cucumis melo var. makuwa]9.0e-2982.56Show/hide
Query:  KNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKSAVTTASLD
        KNLKIK W+KYNFQHATIKH+KEWFAEN YLQD+DQ+KN EFLNDKSKLL ALAQATTDADFQRLLSTAVNASSSSKS  ++   D
Subjt:  KNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKSAVTTASLD

KAA0059031.1 polyprotein [Cucumis melo var. makuwa]5.1e-2490.32Show/hide
Query:  KNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADF
        KNLKIKWW KYNFQHATIKH+KEWFA+NGYLQD+DQ+KN EFLNDKSKLLAALAQATTDADF
Subjt:  KNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADF

TYJ98361.1 hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]8.5e-1176.36Show/hide
Query:  FAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKSA
        + +NG LQD+DQ+KNA+FLNDK K LAAL QAT DADFQRLLSTAVN SSSSK A
Subjt:  FAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKSA

XP_031739746.1 uncharacterized protein LOC116403279 [Cucumis sativus]1.0e-1685.45Show/hide
Query:  QHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLST
        +HATIKHMKEWFAEN YLQD+DQ+KN EFLNDKSKLLA LAQATTD +FQRLLST
Subjt:  QHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLST

TrEMBL top hitse value%identityAlignment
A0A0A0KYU0 Uncharacterized protein5.0e-1785.45Show/hide
Query:  QHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLST
        +HATIKHMKEWFAEN YLQD+DQ+KN EFLNDKSKLLA LAQATTD +FQRLLST
Subjt:  QHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLST

A0A5A7SNT5 Uncharacterized protein3.0e-2281.43Show/hide
Query:  DKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKS
        +KY+FQHATIKH+KEWF ENGYLQD+DQ KN +FLN+KSKLLA LAQATTDADFQRLL T VNAS+SSKS
Subjt:  DKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKS

A0A5A7SWC0 Uncharacterized protein4.4e-2982.56Show/hide
Query:  KNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKSAVTTASLD
        KNLKIK W+KYNFQHATIKH+KEWFAEN YLQD+DQ+KN EFLNDKSKLL ALAQATTDADFQRLLSTAVNASSSSKS  ++   D
Subjt:  KNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKSAVTTASLD

A0A5A7UZX0 Polyprotein2.5e-2490.32Show/hide
Query:  KNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADF
        KNLKIKWW KYNFQHATIKH+KEWFA+NGYLQD+DQ+KN EFLNDKSKLLAALAQATTDADF
Subjt:  KNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADF

A0A5D3BI61 Uncharacterized protein4.1e-1176.36Show/hide
Query:  FAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKSA
        + +NG LQD+DQ+KNA+FLNDK K LAAL QAT DADFQRLLSTAVN SSSSK A
Subjt:  FAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAATTTGCTGGAGTTTCAACACAGCATCCTATCCTCAATACAAAATGCTTGTAAAAATCTCAAGATTAAATGGTGGGACAAATACAATTTCCAGCATGCCACCAT
TAAACACATGAAAGAGTGGTTCGCAGAGAATGGCTATCTTCAAGACCTCGATCAGAAAAAGAATGCAGAGTTCTTGAATGATAAATCAAAACTACTTGCAGCACTGGCAC
AGGCAACAACTGATGCCGATTTTCAAAGATTATTATCAACGGCAGTAAATGCCTCTTCAAGCTCAAAATCAGCTGTAACGACCGCAAGTTTGGATTCTTTAAGCTACCGA
AAAACCATCCTCCCCAAGTTTTCCTTCCTTTCCGCCGCGTTTCAGCTCCGCTGTTGTGGTTCTCAGTCGTTCTTGCCGCCGAAAGGAGCTTTAGAAGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATAATTTGCTGGAGTTTCAACACAGCATCCTATCCTCAATACAAAATGCTTGTAAAAATCTCAAGATTAAATGGTGGGACAAATACAATTTCCAGCATGCCACCAT
TAAACACATGAAAGAGTGGTTCGCAGAGAATGGCTATCTTCAAGACCTCGATCAGAAAAAGAATGCAGAGTTCTTGAATGATAAATCAAAACTACTTGCAGCACTGGCAC
AGGCAACAACTGATGCCGATTTTCAAAGATTATTATCAACGGCAGTAAATGCCTCTTCAAGCTCAAAATCAGCTGTAACGACCGCAAGTTTGGATTCTTTAAGCTACCGA
AAAACCATCCTCCCCAAGTTTTCCTTCCTTTCCGCCGCGTTTCAGCTCCGCTGTTGTGGTTCTCAGTCGTTCTTGCCGCCGAAAGGAGCTTTAGAAGTGTAG
Protein sequenceShow/hide protein sequence
MDNLLEFQHSILSSIQNACKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKSAVTTASLDSLSYR
KTILPKFSFLSAAFQLRCCGSQSFLPPKGALEV