; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0017247 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017247
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPentatricopeptide repeat
Genome locationchr12:3464529..3466648
RNA-Seq ExpressionPI0017247
SyntenyPI0017247
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055365.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 [Cucumis melo var. makuwa]3.5e-11691.43Show/hide
Query:  MQRIRQQLLTLQRLPLSPELLRFQIPAIYSPFSSSSSSISDSPSTSIATKPNTTLTHDELTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSI
        M+RIRQQLLTLQRLPLSPELLRFQIP I SPFSSSSS IS SPS SIAT+PNTTLTHDELTRINLLLPRLCLYNHLSTAI LLHATLLTNPSLQSL LS+
Subjt:  MQRIRQQLLTLQRLPLSPELLRFQIPAIYSPFSSSSSSISDSPSTSIATKPNTTLTHDELTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSI

Query:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNL
        LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVT+LISSYCKRRKSKEALK+FHWMLRPGSPCKP+ERVYKTLIAGL RKGMTFDALKVLRNMIDSNL
Subjt:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNL

Query:  VPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVGDQNTSDHLRRV
        VPDCDLRNWVFR LL+EAMI EAMEFNET N VGDQ+T DHLRRV
Subjt:  VPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVGDQNTSDHLRRV

KAG6584178.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.0e-9977.52Show/hide
Query:  MQRIRQQLLTLQRLPLSPELLRFQIPAIYSPFSSSSSSISDSPSTSIATKPNTTLTHDELTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSI
        M+ +RQ+LL L RLPL P+L+  QIPAI +PFSSSSS  S S   S A+K NTTLT DELT+I+LLLPRLC YNH STAI LL   LLTN SLQSLPLSI
Subjt:  MQRIRQQLLTLQRLPLSPELLRFQIPAIYSPFSSSSSSISDSPSTSIATKPNTTLTHDELTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSI

Query:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNL
        LSHSLASQSDFALTMSLLTRLKHH NALLYS+PI+T+LI SY ++RK KEALK+FHWMLRPGSPCKPDERVYKTLIAGLCRKGM  DALK+L+NMIDSNL
Subjt:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNL

Query:  VPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVGDQNTSDHLRRVSELLDRIITNWID
        VPD DLR+WVFR LL+EAMI EA E +ETLN +GD+NTSDHLRRVSELLDRIITNWI+
Subjt:  VPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVGDQNTSDHLRRVSELLDRIITNWID

TYJ99292.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X1 [Cucumis melo var. makuwa]3.5e-11691.43Show/hide
Query:  MQRIRQQLLTLQRLPLSPELLRFQIPAIYSPFSSSSSSISDSPSTSIATKPNTTLTHDELTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSI
        M+RIRQQLLTLQRLPLSPELLRFQIP I SPFSSSSS IS SPS SIAT+PNTTLTHDELTRINLLLPRLCLYNHLSTAI LLHATLLTNPSLQSL LS+
Subjt:  MQRIRQQLLTLQRLPLSPELLRFQIPAIYSPFSSSSSSISDSPSTSIATKPNTTLTHDELTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSI

Query:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNL
        LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVT+LISSYCKRRKSKEALK+FHWMLRPGSPCKP+ERVYKTLIAGL RKGMTFDALKVLRNMIDSNL
Subjt:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNL

Query:  VPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVGDQNTSDHLRRV
        VPDCDLRNWVFR LL+EAMI EAMEFNET N VGDQ+T DHLRRV
Subjt:  VPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVGDQNTSDHLRRV

XP_004154059.1 putative pentatricopeptide repeat-containing protein At5g59900 [Cucumis sativus]1.9e-12592.64Show/hide
Query:  MQRIRQQLLTLQRLPLSPELLRFQIPAIYSPFSSSSSSISDSPSTSIATKPNTTLTHDELTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSI
        M+RIRQQLLTLQRLPLSPELLRFQIPAI SPFSSSSS ISDSPS SIATKPNTTLTHDELTRINLLLPRLCL+NHLSTAI+LLHATLLTNPSL SL LS+
Subjt:  MQRIRQQLLTLQRLPLSPELLRFQIPAIYSPFSSSSSSISDSPSTSIATKPNTTLTHDELTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSI

Query:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNL
        LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVT+LISSYCKRRKSKEALK+FHWMLRPGSPCKP+ERVYKTLIAGL RKGMTFDALKVLRNMIDSNL
Subjt:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNL

Query:  VPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVGDQNTSDHLRRVSELLDRIITNWID
        VPDCDLRNWVFRSLLKEAMI EAMEFN+ LN VGDQNT DHLRRVSELL+RIITNWID
Subjt:  VPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVGDQNTSDHLRRVSELLDRIITNWID

XP_038876976.1 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benincasa hispida]2.5e-10984.29Show/hide
Query:  MQRIRQQLLTLQRLPLSPELLRFQIPAIYSPFSSSSSSISDS--PSTSIATKPNTTLTHDEL-TRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLP
        M+RIRQ+LL L RLPL P+LL +QIPAI S  SSSSSSISDS   S SIA++PNTTLTHDEL T+INLLLPRLC YNH STAI LL ATLLTNPSLQSLP
Subjt:  MQRIRQQLLTLQRLPLSPELLRFQIPAIYSPFSSSSSSISDS--PSTSIATKPNTTLTHDEL-TRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLP

Query:  LSILSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMID
        LSILSHSLASQSDFALTMSLLTRL HH NALLYSTPI+T+LI SY KRRKSK+ALK+FHWMLRPGSPCKPDERVY TLIAGLCRKGMT DALKVLRNM++
Subjt:  LSILSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMID

Query:  SNLVPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVGDQNTSDHLRRVSELLDRIITNWID
        SNLVPDCDLRNWVFR LL+EAMI EAME NETLN VGDQNTSDHLR+VSELLDRIITNWID
Subjt:  SNLVPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVGDQNTSDHLRRVSELLDRIITNWID

TrEMBL top hitse value%identityAlignment
A0A0A0LRQ9 Uncharacterized protein9.0e-12692.64Show/hide
Query:  MQRIRQQLLTLQRLPLSPELLRFQIPAIYSPFSSSSSSISDSPSTSIATKPNTTLTHDELTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSI
        M+RIRQQLLTLQRLPLSPELLRFQIPAI SPFSSSSS ISDSPS SIATKPNTTLTHDELTRINLLLPRLCL+NHLSTAI+LLHATLLTNPSL SL LS+
Subjt:  MQRIRQQLLTLQRLPLSPELLRFQIPAIYSPFSSSSSSISDSPSTSIATKPNTTLTHDELTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSI

Query:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNL
        LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVT+LISSYCKRRKSKEALK+FHWMLRPGSPCKP+ERVYKTLIAGL RKGMTFDALKVLRNMIDSNL
Subjt:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNL

Query:  VPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVGDQNTSDHLRRVSELLDRIITNWID
        VPDCDLRNWVFRSLLKEAMI EAMEFN+ LN VGDQNT DHLRRVSELL+RIITNWID
Subjt:  VPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVGDQNTSDHLRRVSELLDRIITNWID

A0A5A7UP05 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X21.7e-11691.43Show/hide
Query:  MQRIRQQLLTLQRLPLSPELLRFQIPAIYSPFSSSSSSISDSPSTSIATKPNTTLTHDELTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSI
        M+RIRQQLLTLQRLPLSPELLRFQIP I SPFSSSSS IS SPS SIAT+PNTTLTHDELTRINLLLPRLCLYNHLSTAI LLHATLLTNPSLQSL LS+
Subjt:  MQRIRQQLLTLQRLPLSPELLRFQIPAIYSPFSSSSSSISDSPSTSIATKPNTTLTHDELTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSI

Query:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNL
        LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVT+LISSYCKRRKSKEALK+FHWMLRPGSPCKP+ERVYKTLIAGL RKGMTFDALKVLRNMIDSNL
Subjt:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNL

Query:  VPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVGDQNTSDHLRRV
        VPDCDLRNWVFR LL+EAMI EAMEFNET N VGDQ+T DHLRRV
Subjt:  VPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVGDQNTSDHLRRV

A0A5D3BHR6 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X11.7e-11691.43Show/hide
Query:  MQRIRQQLLTLQRLPLSPELLRFQIPAIYSPFSSSSSSISDSPSTSIATKPNTTLTHDELTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSI
        M+RIRQQLLTLQRLPLSPELLRFQIP I SPFSSSSS IS SPS SIAT+PNTTLTHDELTRINLLLPRLCLYNHLSTAI LLHATLLTNPSLQSL LS+
Subjt:  MQRIRQQLLTLQRLPLSPELLRFQIPAIYSPFSSSSSSISDSPSTSIATKPNTTLTHDELTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSI

Query:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNL
        LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVT+LISSYCKRRKSKEALK+FHWMLRPGSPCKP+ERVYKTLIAGL RKGMTFDALKVLRNMIDSNL
Subjt:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNL

Query:  VPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVGDQNTSDHLRRV
        VPDCDLRNWVFR LL+EAMI EAMEFNET N VGDQ+T DHLRRV
Subjt:  VPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVGDQNTSDHLRRV

A0A6J1E820 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like6.1e-9876.54Show/hide
Query:  MQRIRQQLLTLQRLPLSPELLRFQIPAIYSPFS--SSSSSISDSPSTSIATKPNTTLTHDELTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPL
        M+ I Q+LL L RLPL P+L+  QIPAI +PFS  SSSSS+ D    S A+K NTTLT DELT+I+LLLPRLC YNH STAI LL   LLTN SLQSLPL
Subjt:  MQRIRQQLLTLQRLPLSPELLRFQIPAIYSPFS--SSSSSISDSPSTSIATKPNTTLTHDELTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPL

Query:  SILSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDS
        SILSHSLASQSDFALTMSLLTRLKHH NALLYS+PI+T+LI SY K+RK KEALK+FHWMLRPGSPCKPDERVYKTLIAGLCRKGM  DALK+L+NMIDS
Subjt:  SILSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDS

Query:  NLVPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVGDQNTSDHLRRVSELLDRIITNWID
        NLVPD DLR+WVFR LL+EAMI EA E +ETLN +GD+NTSDHLRRVSELLD II NWI+
Subjt:  NLVPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVGDQNTSDHLRRVSELLDRIITNWID

A0A6J1KEJ7 pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like4.0e-9775.97Show/hide
Query:  MQRIRQQLLTLQRLPLSPELLRFQIPAIYSPFSSSSSSISDSPSTSIATKPNTTLTHDELTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSI
        M+ IRQ+LL L+RLPL P+L+  QIPAI +PFSSSSS  S S   S A+K NTTLT DELT+I+LLLPRLCLYNH STAI LL   LLTN SLQSLPLSI
Subjt:  MQRIRQQLLTLQRLPLSPELLRFQIPAIYSPFSSSSSSISDSPSTSIATKPNTTLTHDELTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSI

Query:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNL
        LSHSLASQSDFALTMSLLTRLKHH NALLYS+PI+T+LI SY K+RKSKEALK+FHWMLRPGSPCKPDE VYKTLIAGLCRKGM  DALK+L+NMIDSNL
Subjt:  LSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNL

Query:  VPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVGDQNTSDHLRRVSELLDRIITNWID
        VPD DLR+WV   LL+EAMI EA E +ETLN + D+N SDHLR+VSELLDR+I NWI+
Subjt:  VPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVGDQNTSDHLRRVSELLDRIITNWID

SwissProt top hitse value%identityAlignment
O49436 Pentatricopeptide repeat-containing protein At4g200906.7e-0927.59Show/hide
Query:  NLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSILSHSLASQ---SDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLR
        N L+  LCL   L  A++LL   + +      +    L + L  Q   +D    +S +    +H N  +YS     +LIS   K  K++EA+ ++  M  
Subjt:  NLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSILSHSLASQ---SDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLR

Query:  PGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVG
         G  CKP+  VY  L+ GLCR+G   +A ++L  MI S  +P+    + + +   K  +  EA++  + ++  G
Subjt:  PGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVG

Q6NQ83 Pentatricopeptide repeat-containing protein At3g22470, mitochondrial6.2e-0727.17Show/hide
Query:  ELTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSILSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWM
        +L  ++ L+  LCL   +S A+ L+   +        +    + + L    + AL + L  +++     +  S    +++I S CK     +AL +F+ M
Subjt:  ELTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSILSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWM

Query:  LRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIREAME-FNETL
           G   K D   Y +LI GLC  G   D  K+LR MI  N++PD    + +    +KE  + EA E +NE +
Subjt:  LRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIREAME-FNETL

Q8LDU5 Pentatricopeptide repeat-containing protein At4g01400, mitochondrial1.1e-0626.06Show/hide
Query:  LLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSILSHSLASQSDFALTMSLLTRLK---HHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRP
        +L+   C    ++ A+ LL   L        L  + L +SL  ++       LL R+K    +P+ + Y+T     +I  +C+  ++ +A K+   ML  
Subjt:  LLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSILSHSLASQSDFALTMSLLTRLK---HHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRP

Query:  GSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVGDQNTSDHLRRVSELL
        G  C P+   Y+TLI GLC +GM  +  K L  MI     P   + N + +       + EA +  E +   G+   SD    V  L+
Subjt:  GSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVGDQNTSDHLRRVSELL

Q9FND8 Pentatricopeptide repeat-containing protein At5g404001.9e-0829.69Show/hide
Query:  SILSHSLASQSDFALTMSLLTRLKH---HPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNM
        +IL++   + S+F      L +++     P+ + Y+T     L+SSYC+R + KEA  ++  M R      PD   Y +LI GLC+ G   +A +    M
Subjt:  SILSHSLASQSDFALTMSLLTRLKH---HPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNM

Query:  IDSNLVPDCDLRNWVFRSLLKEAMIREA
        +D  + PDC   N +  +  KE M++++
Subjt:  IDSNLVPDCDLRNWVFRSLLKEAMIREA

Q9T0D6 Pentatricopeptide repeat-containing protein At4g116901.4e-0624.56Show/hide
Query:  LTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSILSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWML
        L   N+L+   C     S A  ++            +  +IL  + A   +    + L  RL      L+      ++LI  +C + +  EA ++F  M+
Subjt:  LTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSILSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWML

Query:  RPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIREAMEFNETL
             C+P+E +Y T+I G C++G ++ ALK+L+ M +  L P+     ++   L KE   +EA    E +
Subjt:  RPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIREAMEFNETL

Arabidopsis top hitse value%identityAlignment
AT3G22470.1 Pentatricopeptide repeat (PPR) superfamily protein4.4e-0827.17Show/hide
Query:  ELTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSILSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWM
        +L  ++ L+  LCL   +S A+ L+   +        +    + + L    + AL + L  +++     +  S    +++I S CK     +AL +F+ M
Subjt:  ELTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSILSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWM

Query:  LRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIREAME-FNETL
           G   K D   Y +LI GLC  G   D  K+LR MI  N++PD    + +    +KE  + EA E +NE +
Subjt:  LRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIREAME-FNETL

AT4G01400.3 FUNCTIONS IN: molecular_function unknown7.6e-0826.06Show/hide
Query:  LLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSILSHSLASQSDFALTMSLLTRLK---HHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRP
        +L+   C    ++ A+ LL   L        L  + L +SL  ++       LL R+K    +P+ + Y+T     +I  +C+  ++ +A K+   ML  
Subjt:  LLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSILSHSLASQSDFALTMSLLTRLK---HHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRP

Query:  GSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVGDQNTSDHLRRVSELL
        G  C P+   Y+TLI GLC +GM  +  K L  MI     P   + N + +       + EA +  E +   G+   SD    V  L+
Subjt:  GSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVGDQNTSDHLRRVSELL

AT4G11690.1 Pentatricopeptide repeat (PPR-like) superfamily protein9.9e-0824.56Show/hide
Query:  LTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSILSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWML
        L   N+L+   C     S A  ++            +  +IL  + A   +    + L  RL      L+      ++LI  +C + +  EA ++F  M+
Subjt:  LTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSILSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWML

Query:  RPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIREAMEFNETL
             C+P+E +Y T+I G C++G ++ ALK+L+ M +  L P+     ++   L KE   +EA    E +
Subjt:  RPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIREAMEFNETL

AT4G20090.1 Pentatricopeptide repeat (PPR) superfamily protein4.7e-1027.59Show/hide
Query:  NLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSILSHSLASQ---SDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLR
        N L+  LCL   L  A++LL   + +      +    L + L  Q   +D    +S +    +H N  +YS     +LIS   K  K++EA+ ++  M  
Subjt:  NLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSILSHSLASQ---SDFALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLR

Query:  PGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVG
         G  CKP+  VY  L+ GLCR+G   +A ++L  MI S  +P+    + + +   K  +  EA++  + ++  G
Subjt:  PGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIREAMEFNETLNLVG

AT5G40400.1 Pentatricopeptide repeat (PPR) superfamily protein1.4e-0929.69Show/hide
Query:  SILSHSLASQSDFALTMSLLTRLKH---HPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNM
        +IL++   + S+F      L +++     P+ + Y+T     L+SSYC+R + KEA  ++  M R      PD   Y +LI GLC+ G   +A +    M
Subjt:  SILSHSLASQSDFALTMSLLTRLKH---HPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNM

Query:  IDSNLVPDCDLRNWVFRSLLKEAMIREA
        +D  + PDC   N +  +  KE M++++
Subjt:  IDSNLVPDCDLRNWVFRSLLKEAMIREA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAGAATAAGGCAACAGCTTCTTACCCTACAACGTCTTCCACTCTCACCAGAGCTCCTCCGCTTTCAAATTCCCGCCATTTATTCTCCATTTTCTTCTTCCTCCTC
CTCCATTTCTGATTCTCCATCAACTTCCATAGCCACCAAACCCAATACCACTCTGACCCACGACGAGCTCACAAGGATTAATCTCCTTCTTCCTCGTCTCTGTCTCTACA
ACCACCTTTCTACTGCTATAAATCTTCTCCATGCCACTCTCCTCACCAATCCTTCACTTCAATCTCTTCCCCTTTCAATTCTCTCCCATTCACTTGCTTCCCAGTCCGAT
TTTGCCCTCACAATGTCCCTCCTCACTCGTCTTAAGCACCATCCCAATGCCCTTCTCTATTCAACCCCTATCGTCACTCTGCTTATTTCCTCTTATTGTAAACGCCGGAA
ATCCAAGGAAGCCTTGAAGATGTTCCATTGGATGCTGAGACCGGGGTCGCCATGTAAGCCGGACGAGAGGGTTTATAAAACCCTAATTGCGGGACTTTGTAGGAAGGGTA
TGACATTTGATGCTTTGAAGGTTCTAAGGAATATGATTGATTCCAATTTGGTTCCGGATTGCGATTTGAGAAATTGGGTTTTTAGGTCTTTGCTGAAAGAAGCGATGATC
CGCGAAGCAATGGAGTTTAATGAGACTTTGAATCTCGTTGGCGATCAGAATACCAGTGACCATCTGAGAAGGGTGTCGGAATTGTTGGATCGTATCATCACCAATTGGAT
AGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGAGAATAAGGCAACAGCTTCTTACCCTACAACGTCTTCCACTCTCACCAGAGCTCCTCCGCTTTCAAATTCCCGCCATTTATTCTCCATTTTCTTCTTCCTCCTC
CTCCATTTCTGATTCTCCATCAACTTCCATAGCCACCAAACCCAATACCACTCTGACCCACGACGAGCTCACAAGGATTAATCTCCTTCTTCCTCGTCTCTGTCTCTACA
ACCACCTTTCTACTGCTATAAATCTTCTCCATGCCACTCTCCTCACCAATCCTTCACTTCAATCTCTTCCCCTTTCAATTCTCTCCCATTCACTTGCTTCCCAGTCCGAT
TTTGCCCTCACAATGTCCCTCCTCACTCGTCTTAAGCACCATCCCAATGCCCTTCTCTATTCAACCCCTATCGTCACTCTGCTTATTTCCTCTTATTGTAAACGCCGGAA
ATCCAAGGAAGCCTTGAAGATGTTCCATTGGATGCTGAGACCGGGGTCGCCATGTAAGCCGGACGAGAGGGTTTATAAAACCCTAATTGCGGGACTTTGTAGGAAGGGTA
TGACATTTGATGCTTTGAAGGTTCTAAGGAATATGATTGATTCCAATTTGGTTCCGGATTGCGATTTGAGAAATTGGGTTTTTAGGTCTTTGCTGAAAGAAGCGATGATC
CGCGAAGCAATGGAGTTTAATGAGACTTTGAATCTCGTTGGCGATCAGAATACCAGTGACCATCTGAGAAGGGTGTCGGAATTGTTGGATCGTATCATCACCAATTGGAT
AGACTAGAGAAGATCTTCTGCAGACAGAACTTATAATGCATATATAAGGATTCAGCAACTTTATCACGGGATAGTCTACTGCATGATTAAAGTGCATAGAAAGTTGGGAA
GCTTGGTATCGATTATCTGATTGGCAATGTTTAATTCTTTTTTACTTCTTTGTATTGTGTTGTATATATAGTTAATTAACTGAGTAGATCTGTGACATTTGCTGCCATTT
CATTTCAAAGGCTAGATCACACAAAGTAATTCCACACGAAAGTATTAGTATTTAAGCTAGTTAAACTAAAAGCTAAAAATAAAGGGCAAGCTTCTAAACCATATCATTCT
TCCTGTTTTTCTATCAGCCAAAACTTGTGCATTAGTTACCATTATGTGTGTTATAATTGTTTTCCCATCTTGCTACCACAAAGTGTAATTTCTGCATTCTTCTTGCAACT
TGAATTGATGTAAAGAAAGCTTAAAGCTTAAACAGCCTGTAGCTAGAAGGAGAAGAGAAAGAAGAACAACAAAAACAGATAGCGTGGATTGTTTATGTTTACTAGTGAGC
ATGAACATCGCGGTTAAAGTTGATGAATTACCATAAATTTTATGGTACTAAAGCAGAGTCATTTTCTCCCAAAATTAATATTGTTTCACTTATTGGGCTTCAACAAATTT
TTAAGTTTACAAGGGAGGGAGAATACTTCATAACTCTTCAACTTACGCTTATA
Protein sequenceShow/hide protein sequence
MQRIRQQLLTLQRLPLSPELLRFQIPAIYSPFSSSSSSISDSPSTSIATKPNTTLTHDELTRINLLLPRLCLYNHLSTAINLLHATLLTNPSLQSLPLSILSHSLASQSD
FALTMSLLTRLKHHPNALLYSTPIVTLLISSYCKRRKSKEALKMFHWMLRPGSPCKPDERVYKTLIAGLCRKGMTFDALKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMI
REAMEFNETLNLVGDQNTSDHLRRVSELLDRIITNWID