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PI0017279 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017279
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionS locus-related glycoprotein 1 binding pollen coat
Genome locationchr08:9464293..9464705
RNA-Seq ExpressionPI0017279
SyntenyPI0017279
Gene Ontology termsNA
InterPro domainsIPR010851 - Defensin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH07492.1 hypothetical protein Prudu_019451 [Prunus dulcis]3.3e-0645.61Show/hide
Query:  VPQGISAIKCQDRLYVGGCTQNDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC
        VPQ  +  +C ++LY  GCT +DC  KC + HH    KCI+ +   T YACYC +NC
Subjt:  VPQGISAIKCQDRLYVGGCTQNDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC

KAA0042348.1 S locus-related glycoprotein 1 binding pollen coat [Cucumis melo var. makuwa]3.9e-1554.22Show/hide
Query:  MANLSSSRVAIIIVIFAVSMILVPQGISAI-KCQDRLYVGGCTQNDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNCPEN
        M  L SS +  I +  AV+MILVPQG  A+ +CQD+LY  GCT  DC  KC + HH  + +CI TDP  T YACYCFYNC +N
Subjt:  MANLSSSRVAIIIVIFAVSMILVPQGISAI-KCQDRLYVGGCTQNDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNCPEN

KAE8649772.1 hypothetical protein Csa_012405, partial [Cucumis sativus]4.6e-0848.39Show/hide
Query:  SMILVPQGISAI-KCQDRLYVGGCTQNDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC
        +++L  Q +SA  +CQD LY  GC  NDC  KC + HH  + +CI T+P+ T YACYCF++C
Subjt:  SMILVPQGISAI-KCQDRLYVGGCTQNDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC

KGN52439.1 hypothetical protein Csa_009048 [Cucumis sativus]4.3e-0637.97Show/hide
Query:  MANLSSSRVAIIIVIFAVSMILVPQGISAIKCQDRLYVGGCTQNDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC
        MA  S S   I   + + + I+ P G+SA KC+ +LY  GC   DC  KCS  +   +++C++  P    Y+CYCFY+C
Subjt:  MANLSSSRVAIIIVIFAVSMILVPQGISAIKCQDRLYVGGCTQNDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC

KGN64987.1 hypothetical protein Csa_022748 [Cucumis sativus]1.5e-1453.16Show/hide
Query:  MANLSSSRVAIIIVIFAVSMILVPQGISAIKCQDRLYVGGCTQNDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC
        M  L SS +  I++I AV+MI +PQG  A +CQD LY  GCT  DC  KC + HH  + +CI TDP  T YACYCFY C
Subjt:  MANLSSSRVAIIIVIFAVSMILVPQGISAIKCQDRLYVGGCTQNDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC

TrEMBL top hitse value%identityAlignment
A0A0A0KYP7 Uncharacterized protein5.7e-4488.89Show/hide
Query:  MFLQFTQQNQACTYTKNMANLSSSRVAIIIVIFAVSMILVPQGISAIKCQDRLYVGGCTQNDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNCPEN
        MFLQFTQQNQACT TK MANLSS RVAIIIVIFAVSMILVPQG SA+KCQDRLYVGGC Q++C  KCSQLHHGGT+KCISTDPTFTKYACYCFYNCPEN
Subjt:  MFLQFTQQNQACTYTKNMANLSSSRVAIIIVIFAVSMILVPQGISAIKCQDRLYVGGCTQNDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNCPEN

A0A0A0L2R3 Uncharacterized protein1.3e-1148.05Show/hide
Query:  LSSSRVAIIIVIFAVSMILVPQGISAI-KCQDRLYVGGCTQNDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC
        + SSR+    +IFAV+++L  Q +SA  +CQD LY  GC  NDC  KC + HH  + +CI T+P+ T YACYCF++C
Subjt:  LSSSRVAIIIVIFAVSMILVPQGISAI-KCQDRLYVGGCTQNDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC

A0A0A0LVZ5 Uncharacterized protein7.2e-1553.16Show/hide
Query:  MANLSSSRVAIIIVIFAVSMILVPQGISAIKCQDRLYVGGCTQNDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC
        M  L SS +  I++I AV+MI +PQG  A +CQD LY  GCT  DC  KC + HH  + +CI TDP  T YACYCFY C
Subjt:  MANLSSSRVAIIIVIFAVSMILVPQGISAIKCQDRLYVGGCTQNDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC

A0A4Y1RT05 Uncharacterized protein1.6e-0645.61Show/hide
Query:  VPQGISAIKCQDRLYVGGCTQNDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC
        VPQ  +  +C ++LY  GCT +DC  KC + HH    KCI+ +   T YACYC +NC
Subjt:  VPQGISAIKCQDRLYVGGCTQNDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNC

A0A5A7THQ7 S locus-related glycoprotein 1 binding pollen coat1.9e-1554.22Show/hide
Query:  MANLSSSRVAIIIVIFAVSMILVPQGISAI-KCQDRLYVGGCTQNDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNCPEN
        M  L SS +  I +  AV+MILVPQG  A+ +CQD+LY  GCT  DC  KC + HH  + +CI TDP  T YACYCFYNC +N
Subjt:  MANLSSSRVAIIIVIFAVSMILVPQGISAI-KCQDRLYVGGCTQNDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNCPEN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTTGCAATTCACTCAGCAAAATCAGGCTTGCACTTACACCAAAAACATGGCAAACCTTTCTTCTTCTCGTGTCGCCATCATTATAGTTATCTTTGCAGTTTCAAT
GATTTTGGTACCTCAAGGAATCTCAGCTATAAAATGTCAAGACAGATTGTATGTTGGCGGGTGCACACAAAATGATTGTGCGCACAAATGTAGTCAGCTACACCATGGTG
GCACAGCTAAATGCATATCTACTGATCCTACGTTTACCAAGTATGCTTGTTATTGTTTCTATAATTGTCCTGAAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTTGCAATTCACTCAGCAAAATCAGGCTTGCACTTACACCAAAAACATGGCAAACCTTTCTTCTTCTCGTGTCGCCATCATTATAGTTATCTTTGCAGTTTCAAT
GATTTTGGTACCTCAAGGAATCTCAGCTATAAAATGTCAAGACAGATTGTATGTTGGCGGGTGCACACAAAATGATTGTGCGCACAAATGTAGTCAGCTACACCATGGTG
GCACAGCTAAATGCATATCTACTGATCCTACGTTTACCAAGTATGCTTGTTATTGTTTCTATAATTGTCCTGAAAATTGA
Protein sequenceShow/hide protein sequence
MFLQFTQQNQACTYTKNMANLSSSRVAIIIVIFAVSMILVPQGISAIKCQDRLYVGGCTQNDCAHKCSQLHHGGTAKCISTDPTFTKYACYCFYNCPEN