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PI0017296 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017296
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr02:5449675..5450416
RNA-Seq ExpressionPI0017296
SyntenyPI0017296
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025487.1 gag-pol polyprotein [Cucumis melo var. makuwa]3.1e-0829.73Show/hide
Query:  IEISNDVNNDQINTVEASQSEVQIKLEEITQKWQANLIIVDQQKKRILELVEDNHRLFQNISDIKKELKGAKNEVDRMSKFVCMLNLRTKDLNKILNSGK
        + I+   +ND+  + E +    ++  E++   W+ +      QK+RI +L+E+N RL   IS +K +LK  + + D+M KFV MLN  T++L+ ILNSG+
Subjt:  IEISNDVNNDQINTVEASQSEVQIKLEEITQKWQANLIIVDQQKKRILELVEDNHRLFQNISDIKKELKGAKNEVDRMSKFVCMLNLRTKDLNKILNSGK

Query:  PASNRQGISFENNKSTASKSSQTVFVP---------VQTSSIMDPKSR
         +S++ G+ F+ ++ +   +++T F+P         V T ++++P ++
Subjt:  PASNRQGISFENNKSTASKSSQTVFVP---------VQTSSIMDPKSR

KAA0033020.1 gag-pol polyprotein [Cucumis melo var. makuwa]7.0e-0833.86Show/hide
Query:  IEISNDVNNDQINTVEASQSEVQIKLEEITQKWQANLIIVDQQKKRILELVEDNHRLFQNISDIKKELKGAKNEVDRMSKFVCMLNLRTKDLNKILNSGK
        I I+  + +D+    E S+S+ ++ +E++   W+ +    + QK+RI +L+E+N  L   I+ +K ++K  +NE D++ K V MLNL TK+L  IL SG 
Subjt:  IEISNDVNNDQINTVEASQSEVQIKLEEITQKWQANLIIVDQQKKRILELVEDNHRLFQNISDIKKELKGAKNEVDRMSKFVCMLNLRTKDLNKILNSGK

Query:  PASNRQGISFENNKSTASKSSQTVFVP
          S R G+ F  +      +S+  FVP
Subjt:  PASNRQGISFENNKSTASKSSQTVFVP

KAA0053331.1 gag-pol polyprotein [Cucumis melo var. makuwa]9.1e-0843.53Show/hide
Query:  QKKRILELVEDNHRLFQNISDIKKELKGAKNEVDRMSKFVCMLNLRTKDLNKILNSGKPASNRQGISFENNKSTASKSSQTVFVP
        QK+RI +L+E+N +L   IS +K +LK  +N+ D+  KFV MLN  T++L+ ILNSG+ +S+R G+ F+ + S++  +S   FVP
Subjt:  QKKRILELVEDNHRLFQNISDIKKELKGAKNEVDRMSKFVCMLNLRTKDLNKILNSGKPASNRQGISFENNKSTASKSSQTVFVP

TYK00378.1 gag-pol polyprotein [Cucumis melo var. makuwa]3.1e-0829.73Show/hide
Query:  IEISNDVNNDQINTVEASQSEVQIKLEEITQKWQANLIIVDQQKKRILELVEDNHRLFQNISDIKKELKGAKNEVDRMSKFVCMLNLRTKDLNKILNSGK
        + I+   +ND+  + E +    ++  E++   W+ +      QK+RI +L+E+N RL   IS +K +LK  + + D+M KFV MLN  T++L+ ILNSG+
Subjt:  IEISNDVNNDQINTVEASQSEVQIKLEEITQKWQANLIIVDQQKKRILELVEDNHRLFQNISDIKKELKGAKNEVDRMSKFVCMLNLRTKDLNKILNSGK

Query:  PASNRQGISFENNKSTASKSSQTVFVP---------VQTSSIMDPKSR
         +S++ G+ F+ ++ +   +++T F+P         V T ++++P ++
Subjt:  PASNRQGISFENNKSTASKSSQTVFVP---------VQTSSIMDPKSR

TYK01584.1 putative envelope-like protein [Cucumis melo var. makuwa]2.8e-0937.93Show/hide
Query:  QINTVEASQSEVQIKLEEITQKWQANLIIVDQQKKRILELVEDNHRLFQNISDIKKELKGAKNEVDRMSKFVCMLNLRTKDLNKILNSGKPASNRQGISF
        +INT + + S+    LEE+   W+ +  +++QQ+++I+ L ++N RL + IS++K ELK AK E D ++K V ML+L T  L++IL+  K  ++++GI +
Subjt:  QINTVEASQSEVQIKLEEITQKWQANLIIVDQQKKRILELVEDNHRLFQNISDIKKELKGAKNEVDRMSKFVCMLNLRTKDLNKILNSGKPASNRQGISF

Query:  ENNKSTASKSSQTVFV
          +K   SK+  TVFV
Subjt:  ENNKSTASKSSQTVFV

TrEMBL top hitse value%identityAlignment
A0A5A7SLA0 Gag-pol polyprotein1.5e-0829.73Show/hide
Query:  IEISNDVNNDQINTVEASQSEVQIKLEEITQKWQANLIIVDQQKKRILELVEDNHRLFQNISDIKKELKGAKNEVDRMSKFVCMLNLRTKDLNKILNSGK
        + I+   +ND+  + E +    ++  E++   W+ +      QK+RI +L+E+N RL   IS +K +LK  + + D+M KFV MLN  T++L+ ILNSG+
Subjt:  IEISNDVNNDQINTVEASQSEVQIKLEEITQKWQANLIIVDQQKKRILELVEDNHRLFQNISDIKKELKGAKNEVDRMSKFVCMLNLRTKDLNKILNSGK

Query:  PASNRQGISFENNKSTASKSSQTVFVP---------VQTSSIMDPKSR
         +S++ G+ F+ ++ +   +++T F+P         V T ++++P ++
Subjt:  PASNRQGISFENNKSTASKSSQTVFVP---------VQTSSIMDPKSR

A0A5D3BMP7 Gag-pol polyprotein1.5e-0829.73Show/hide
Query:  IEISNDVNNDQINTVEASQSEVQIKLEEITQKWQANLIIVDQQKKRILELVEDNHRLFQNISDIKKELKGAKNEVDRMSKFVCMLNLRTKDLNKILNSGK
        + I+   +ND+  + E +    ++  E++   W+ +      QK+RI +L+E+N RL   IS +K +LK  + + D+M KFV MLN  T++L+ ILNSG+
Subjt:  IEISNDVNNDQINTVEASQSEVQIKLEEITQKWQANLIIVDQQKKRILELVEDNHRLFQNISDIKKELKGAKNEVDRMSKFVCMLNLRTKDLNKILNSGK

Query:  PASNRQGISFENNKSTASKSSQTVFVP---------VQTSSIMDPKSR
         +S++ G+ F+ ++ +   +++T F+P         V T ++++P ++
Subjt:  PASNRQGISFENNKSTASKSSQTVFVP---------VQTSSIMDPKSR

A0A5D3BQY7 Putative envelope-like protein1.4e-0937.93Show/hide
Query:  QINTVEASQSEVQIKLEEITQKWQANLIIVDQQKKRILELVEDNHRLFQNISDIKKELKGAKNEVDRMSKFVCMLNLRTKDLNKILNSGKPASNRQGISF
        +INT + + S+    LEE+   W+ +  +++QQ+++I+ L ++N RL + IS++K ELK AK E D ++K V ML+L T  L++IL+  K  ++++GI +
Subjt:  QINTVEASQSEVQIKLEEITQKWQANLIIVDQQKKRILELVEDNHRLFQNISDIKKELKGAKNEVDRMSKFVCMLNLRTKDLNKILNSGKPASNRQGISF

Query:  ENNKSTASKSSQTVFV
          +K   SK+  TVFV
Subjt:  ENNKSTASKSSQTVFV

A0A5D3BVD8 Gag-pol polyprotein3.4e-0833.86Show/hide
Query:  IEISNDVNNDQINTVEASQSEVQIKLEEITQKWQANLIIVDQQKKRILELVEDNHRLFQNISDIKKELKGAKNEVDRMSKFVCMLNLRTKDLNKILNSGK
        I I+  + +D+    E S+S+ ++ +E++   W+ +    + QK+RI +L+E+N  L   I+ +K ++K  +NE D++ K V MLNL TK+L  IL SG 
Subjt:  IEISNDVNNDQINTVEASQSEVQIKLEEITQKWQANLIIVDQQKKRILELVEDNHRLFQNISDIKKELKGAKNEVDRMSKFVCMLNLRTKDLNKILNSGK

Query:  PASNRQGISFENNKSTASKSSQTVFVP
          S R G+ F  +      +S+  FVP
Subjt:  PASNRQGISFENNKSTASKSSQTVFVP

A0A5D3E0I8 Gag-pol polyprotein4.4e-0843.53Show/hide
Query:  QKKRILELVEDNHRLFQNISDIKKELKGAKNEVDRMSKFVCMLNLRTKDLNKILNSGKPASNRQGISFENNKSTASKSSQTVFVP
        QK+RI +L+E+N +L   IS +K +LK  +N+ D+  KFV MLN  T++L+ ILNSG+ +S+R G+ F+ + S++  +S   FVP
Subjt:  QKKRILELVEDNHRLFQNISDIKKELKGAKNEVDRMSKFVCMLNLRTKDLNKILNSGKPASNRQGISFENNKSTASKSSQTVFVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCCAGAAGTATTTATCACCCTAGAGGAAGAAGAGAGAATGAAAGAAAAAATGATAGTACACAAGTCAGAAATGATAGAGATTTCAAACGACGTGAATAATGATCA
AATCAATACAGTGGAAGCTTCCCAAAGTGAAGTGCAAATCAAGCTGGAGGAAATTACGCAAAAATGGCAAGCTAACCTAATTATTGTTGATCAACAGAAAAAGAGGATTC
TCGAACTTGTTGAAGATAATCATCGATTGTTTCAAAATATTTCTGATATAAAGAAAGAATTAAAAGGTGCTAAAAATGAGGTTGATCGAATGTCTAAATTTGTTTGTATG
CTTAACTTAAGAACTAAAGATCTGAATAAAATTTTGAACTCTGGCAAACCTGCTTCCAACAGACAAGGAATAAGTTTTGAGAATAACAAAAGTACTGCAAGCAAATCTTC
TCAAACTGTTTTTGTTCCTGTTCAGACTTCTAGTATAATGGACCCAAAGTCAAGAGCTTTGTGTTCATTTGGTTCTTCTAGTTTATGTTTACTGATTAATGAGTGTTACA
TCAGTTGTTCAAGATATCTTGTTCAACATTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCCAGAAGTATTTATCACCCTAGAGGAAGAAGAGAGAATGAAAGAAAAAATGATAGTACACAAGTCAGAAATGATAGAGATTTCAAACGACGTGAATAATGATCA
AATCAATACAGTGGAAGCTTCCCAAAGTGAAGTGCAAATCAAGCTGGAGGAAATTACGCAAAAATGGCAAGCTAACCTAATTATTGTTGATCAACAGAAAAAGAGGATTC
TCGAACTTGTTGAAGATAATCATCGATTGTTTCAAAATATTTCTGATATAAAGAAAGAATTAAAAGGTGCTAAAAATGAGGTTGATCGAATGTCTAAATTTGTTTGTATG
CTTAACTTAAGAACTAAAGATCTGAATAAAATTTTGAACTCTGGCAAACCTGCTTCCAACAGACAAGGAATAAGTTTTGAGAATAACAAAAGTACTGCAAGCAAATCTTC
TCAAACTGTTTTTGTTCCTGTTCAGACTTCTAGTATAATGGACCCAAAGTCAAGAGCTTTGTGTTCATTTGGTTCTTCTAGTTTATGTTTACTGATTAATGAGTGTTACA
TCAGTTGTTCAAGATATCTTGTTCAACATTATTGA
Protein sequenceShow/hide protein sequence
MVPEVFITLEEEERMKEKMIVHKSEMIEISNDVNNDQINTVEASQSEVQIKLEEITQKWQANLIIVDQQKKRILELVEDNHRLFQNISDIKKELKGAKNEVDRMSKFVCM
LNLRTKDLNKILNSGKPASNRQGISFENNKSTASKSSQTVFVPVQTSSIMDPKSRALCSFGSSSLCLLINECYISCSRYLVQHY