; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0017301 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017301
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr01:12758412..12761035
RNA-Seq ExpressionPI0017301
SyntenyPI0017301
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042070.1 hypothetical protein E6C27_scaffold67G005320 [Cucumis melo var. makuwa]9.5e-4241.69Show/hide
Query:  MVPTLRKKAEDHKDESDSSSSNRHWKRPSNKAKTFNDDSYERYSLTI-----PEVTTLLQC-SDESLTGPHGVDSTLEVVDTSRSPVVKPPEQSLRLPAL
        M  TL ++  +HKDE+DSS S+RHWKRP  KAK  +DD  ER S  +       +  L++  +DESLTGPH VDST+E VDTS++PV KP EQSLR   L
Subjt:  MVPTLRKKAEDHKDESDSSSSNRHWKRPSNKAKTFNDDSYERYSLTI-----PEVTTLLQC-SDESLTGPHGVDSTLEVVDTSRSPVVKPPEQSLRLPAL

Query:  LEDIRRGKMKVN----VNHPSRGDTCPKVPLEKVTSTHALLKIPEPPLDTSKKQI---------------------------------------------
        LE+IRR KM V      N PS+GD CP+  L+KV+STHA LK  E PL  S +QI                                             
Subjt:  LEDIRRGKMKVN----VNHPSRGDTCPKVPLEKVTSTHALLKIPEPPLDTSKKQI---------------------------------------------

Query:  --------------------------------------------LSILSCEKNKAIDRKELEVAKLQDEVNTLESTLAITEEAIETLVTIRKSMEVVREE
                                                      +LS +K +AID++ELEVAKLQDEVNTLE T AITEEAIE L T+R+SME  R+E
Subjt:  --------------------------------------------LSILSCEKNKAIDRKELEVAKLQDEVNTLESTLAITEEAIETLVTIRKSMEVVREE

Query:  FKNFKWK
        FKNFKWK
Subjt:  FKNFKWK

KAA0048242.1 hypothetical protein E6C27_scaffold63G001580 [Cucumis melo var. makuwa]2.3e-4044.96Show/hide
Query:  MVPTLRKKAEDHKDESDSSSSNRHWKRPSNKAKTFNDDSYERYS--LTIPEVTTLLQCSD-----------ESLTGPHGVDSTLEVVDTSRSPVVKPPEQ
        M  TL ++ ++HKDESDSS S+ HWKRP  KAK   DD   + S  L +P+V +L   +D           ESL GPH VDST+E V TS++PV KP EQ
Subjt:  MVPTLRKKAEDHKDESDSSSSNRHWKRPSNKAKTFNDDSYERYS--LTIPEVTTLLQCSD-----------ESLTGPHGVDSTLEVVDTSRSPVVKPPEQ

Query:  SLRLPALLEDIRRGKMKVNV----NHPSRGDTCPKVPLEK---------------------------VTSTHA-------------LLKIPEPPLDTSKK
        SLR  ALLE+I RGKM V      + PS+GD CPK PL+K                           +   HA             L +     L   KK
Subjt:  SLRLPALLEDIRRGKMKVNV----NHPSRGDTCPKVPLEK---------------------------VTSTHA-------------LLKIPEPPLDTSKK

Query:  QI-------------LSILSCEKNKAIDRKELEVAKLQDEVNTLESTLAITEEAIETLVTIRKSMEVVREEFKNFKWK
        ++             LSILSCEK  AID+KELEV KLQ EVNTLE T  ITEEAI+ L T+R+SMEV +EEFKNFKWK
Subjt:  QI-------------LSILSCEKNKAIDRKELEVAKLQDEVNTLESTLAITEEAIETLVTIRKSMEVVREEFKNFKWK

KAA0052877.1 hypothetical protein E6C27_scaffold1184G00090 [Cucumis melo var. makuwa]3.0e-3548.39Show/hide
Query:  TLRKKAEDHKDESDSSSSNRHWKRPSNKAKTFNDDSYERYS--LTIPEVTTLLQC-----------SDESLTGPHGVDSTLEVVDTSRSPVVKPPEQSLR
        TL ++ ++HKD+SD S S+RHWKRP  K K  +DD   + S  L +P+V+ L              SDESL GP+ VDST+E V TS++P  KP +QSLR
Subjt:  TLRKKAEDHKDESDSSSSNRHWKRPSNKAKTFNDDSYERYS--LTIPEVTTLLQC-----------SDESLTGPHGVDSTLEVVDTSRSPVVKPPEQSLR

Query:  LPALLEDIRRGKMKVNVNH----PSRGDTCPKVPLEKVTSTHALLKIPEPPLDTSKKQI------LSILSCEKNKAIDRKELEVAKLQDEVNTLESTLAI
           LLE+IRRGK+ V   +    PS+GD CPK PL+K  +    L + +  L+   + I      LSILS +K +AID++EL+VAK QDEVNTLESTL I
Subjt:  LPALLEDIRRGKMKVNVNH----PSRGDTCPKVPLEKVTSTHALLKIPEPPLDTSKKQI------LSILSCEKNKAIDRKELEVAKLQDEVNTLESTLAI

Query:  TEEAIETLVTIRKSMEV
         EEAIE L  +R+SMEV
Subjt:  TEEAIETLVTIRKSMEV

KAA0057699.1 hypothetical protein E6C27_scaffold126G00510 [Cucumis melo var. makuwa]9.2e-4551.02Show/hide
Query:  MVPTLRKKAEDHKDESDSSSSNRHWKRPSNKAKTFND--DSYERYSLTIPEVTTLLQC-----------SDESLTGPHGVDSTLEVVDTSRSPVVKPPEQ
        M P L ++  +HKDESDSS S+RHWKRP  KAK   D  D     +L +P+V  L              SDESL GPH VDS  E V TS++PV KP EQ
Subjt:  MVPTLRKKAEDHKDESDSSSSNRHWKRPSNKAKTFND--DSYERYSLTIPEVTTLLQC-----------SDESLTGPHGVDSTLEVVDTSRSPVVKPPEQ

Query:  SLRLPALLEDIRRGKMKV---NVNHP-SRGDTCPKVPLEKVTSTHALLKIPEPPLDTSK---------KQILSIL-----------SCEKNKAIDRKELE
        SLR  ALLE+IRRGKM V   ++  P S+   CPK  L+KV+S HA LK  E PLD ++         K+ L+++              + KAID++ELE
Subjt:  SLRLPALLEDIRRGKMKV---NVNHP-SRGDTCPKVPLEKVTSTHALLKIPEPPLDTSK---------KQILSIL-----------SCEKNKAIDRKELE

Query:  VAKLQDEVNTLESTLAITEEAIETLVTIRKSMEVVREEFKNFKWK
        +AKLQDEVNTLE+T AITEEAIE L T+RKSME  REEFKNFKWK
Subjt:  VAKLQDEVNTLESTLAITEEAIETLVTIRKSMEVVREEFKNFKWK

TYK15844.1 hypothetical protein E5676_scaffold637G00190 [Cucumis melo var. makuwa]6.0e-3641.36Show/hide
Query:  MVPTLRKKAEDHKDESDSSSSNRHWKRPSNKAKTFNDDSYER--YSLTIPE------VTTLLQC-SDESLTGPHGVDSTLEVVDTSRSPVVKPPEQSLRL
        M PTL  + ++H+DESDSS ++ HWKRP  KA    DD  ER    + +P+      +  L++  SDESLT PH VDST+  V TS++ V KP +QSLR 
Subjt:  MVPTLRKKAEDHKDESDSSSSNRHWKRPSNKAKTFNDDSYER--YSLTIPE------VTTLLQC-SDESLTGPHGVDSTLEVVDTSRSPVVKPPEQSLRL

Query:  PALLEDIRRGKMKV---NVNHP-SRGDTCPKVPLEKVTSTHALLKIPEPPLDTSKKQI------------------------------------------
          L E+I   KMKV   ++  P S+GD  PK  L+KV STHA LKI E PLDTSK+Q                                           
Subjt:  PALLEDIRRGKMKV---NVNHP-SRGDTCPKVPLEKVTSTHALLKIPEPPLDTSKKQI------------------------------------------

Query:  --------------------------------LSILSCEKNKAIDRKELEVAKLQDEVNTLESTLAITEEAIETLVTIRKSMEVVREEFKNFKWK
                                        LSILSCEK +AID+ +LEVAKLQDEVNTLEST  IT+E +E L  +RKSME  REEFKNF  K
Subjt:  --------------------------------LSILSCEKNKAIDRKELEVAKLQDEVNTLESTLAITEEAIETLVTIRKSMEVVREEFKNFKWK

TrEMBL top hitse value%identityAlignment
A0A5A7UVX0 PMD domain-containing protein4.5e-4551.02Show/hide
Query:  MVPTLRKKAEDHKDESDSSSSNRHWKRPSNKAKTFND--DSYERYSLTIPEVTTLLQC-----------SDESLTGPHGVDSTLEVVDTSRSPVVKPPEQ
        M P L ++  +HKDESDSS S+RHWKRP  KAK   D  D     +L +P+V  L              SDESL GPH VDS  E V TS++PV KP EQ
Subjt:  MVPTLRKKAEDHKDESDSSSSNRHWKRPSNKAKTFND--DSYERYSLTIPEVTTLLQC-----------SDESLTGPHGVDSTLEVVDTSRSPVVKPPEQ

Query:  SLRLPALLEDIRRGKMKV---NVNHP-SRGDTCPKVPLEKVTSTHALLKIPEPPLDTSK---------KQILSIL-----------SCEKNKAIDRKELE
        SLR  ALLE+IRRGKM V   ++  P S+   CPK  L+KV+S HA LK  E PLD ++         K+ L+++              + KAID++ELE
Subjt:  SLRLPALLEDIRRGKMKV---NVNHP-SRGDTCPKVPLEKVTSTHALLKIPEPPLDTSK---------KQILSIL-----------SCEKNKAIDRKELE

Query:  VAKLQDEVNTLESTLAITEEAIETLVTIRKSMEVVREEFKNFKWK
        +AKLQDEVNTLE+T AITEEAIE L T+RKSME  REEFKNFKWK
Subjt:  VAKLQDEVNTLESTLAITEEAIETLVTIRKSMEVVREEFKNFKWK

A0A5D3C961 Uncharacterized protein1.1e-4044.96Show/hide
Query:  MVPTLRKKAEDHKDESDSSSSNRHWKRPSNKAKTFNDDSYERYS--LTIPEVTTLLQCSD-----------ESLTGPHGVDSTLEVVDTSRSPVVKPPEQ
        M  TL ++ ++HKDESDSS S+ HWKRP  KAK   DD   + S  L +P+V +L   +D           ESL GPH VDST+E V TS++PV KP EQ
Subjt:  MVPTLRKKAEDHKDESDSSSSNRHWKRPSNKAKTFNDDSYERYS--LTIPEVTTLLQCSD-----------ESLTGPHGVDSTLEVVDTSRSPVVKPPEQ

Query:  SLRLPALLEDIRRGKMKVNV----NHPSRGDTCPKVPLEK---------------------------VTSTHA-------------LLKIPEPPLDTSKK
        SLR  ALLE+I RGKM V      + PS+GD CPK PL+K                           +   HA             L +     L   KK
Subjt:  SLRLPALLEDIRRGKMKVNV----NHPSRGDTCPKVPLEK---------------------------VTSTHA-------------LLKIPEPPLDTSKK

Query:  QI-------------LSILSCEKNKAIDRKELEVAKLQDEVNTLESTLAITEEAIETLVTIRKSMEVVREEFKNFKWK
        ++             LSILSCEK  AID+KELEV KLQ EVNTLE T  ITEEAI+ L T+R+SMEV +EEFKNFKWK
Subjt:  QI-------------LSILSCEKNKAIDRKELEVAKLQDEVNTLESTLAITEEAIETLVTIRKSMEVVREEFKNFKWK

A0A5D3CRJ3 Uncharacterized protein1.4e-3548.39Show/hide
Query:  TLRKKAEDHKDESDSSSSNRHWKRPSNKAKTFNDDSYERYS--LTIPEVTTLLQC-----------SDESLTGPHGVDSTLEVVDTSRSPVVKPPEQSLR
        TL ++ ++HKD+SD S S+RHWKRP  K K  +DD   + S  L +P+V+ L              SDESL GP+ VDST+E V TS++P  KP +QSLR
Subjt:  TLRKKAEDHKDESDSSSSNRHWKRPSNKAKTFNDDSYERYS--LTIPEVTTLLQC-----------SDESLTGPHGVDSTLEVVDTSRSPVVKPPEQSLR

Query:  LPALLEDIRRGKMKVNVNH----PSRGDTCPKVPLEKVTSTHALLKIPEPPLDTSKKQI------LSILSCEKNKAIDRKELEVAKLQDEVNTLESTLAI
           LLE+IRRGK+ V   +    PS+GD CPK PL+K  +    L + +  L+   + I      LSILS +K +AID++EL+VAK QDEVNTLESTL I
Subjt:  LPALLEDIRRGKMKVNVNH----PSRGDTCPKVPLEKVTSTHALLKIPEPPLDTSKKQI------LSILSCEKNKAIDRKELEVAKLQDEVNTLESTLAI

Query:  TEEAIETLVTIRKSMEV
         EEAIE L  +R+SMEV
Subjt:  TEEAIETLVTIRKSMEV

A0A5D3CY14 Uncharacterized protein2.9e-3641.36Show/hide
Query:  MVPTLRKKAEDHKDESDSSSSNRHWKRPSNKAKTFNDDSYER--YSLTIPE------VTTLLQC-SDESLTGPHGVDSTLEVVDTSRSPVVKPPEQSLRL
        M PTL  + ++H+DESDSS ++ HWKRP  KA    DD  ER    + +P+      +  L++  SDESLT PH VDST+  V TS++ V KP +QSLR 
Subjt:  MVPTLRKKAEDHKDESDSSSSNRHWKRPSNKAKTFNDDSYER--YSLTIPE------VTTLLQC-SDESLTGPHGVDSTLEVVDTSRSPVVKPPEQSLRL

Query:  PALLEDIRRGKMKV---NVNHP-SRGDTCPKVPLEKVTSTHALLKIPEPPLDTSKKQI------------------------------------------
          L E+I   KMKV   ++  P S+GD  PK  L+KV STHA LKI E PLDTSK+Q                                           
Subjt:  PALLEDIRRGKMKV---NVNHP-SRGDTCPKVPLEKVTSTHALLKIPEPPLDTSKKQI------------------------------------------

Query:  --------------------------------LSILSCEKNKAIDRKELEVAKLQDEVNTLESTLAITEEAIETLVTIRKSMEVVREEFKNFKWK
                                        LSILSCEK +AID+ +LEVAKLQDEVNTLEST  IT+E +E L  +RKSME  REEFKNF  K
Subjt:  --------------------------------LSILSCEKNKAIDRKELEVAKLQDEVNTLESTLAITEEAIETLVTIRKSMEVVREEFKNFKWK

A0A5D3D2A0 PMD domain-containing protein4.6e-4241.69Show/hide
Query:  MVPTLRKKAEDHKDESDSSSSNRHWKRPSNKAKTFNDDSYERYSLTI-----PEVTTLLQC-SDESLTGPHGVDSTLEVVDTSRSPVVKPPEQSLRLPAL
        M  TL ++  +HKDE+DSS S+RHWKRP  KAK  +DD  ER S  +       +  L++  +DESLTGPH VDST+E VDTS++PV KP EQSLR   L
Subjt:  MVPTLRKKAEDHKDESDSSSSNRHWKRPSNKAKTFNDDSYERYSLTI-----PEVTTLLQC-SDESLTGPHGVDSTLEVVDTSRSPVVKPPEQSLRLPAL

Query:  LEDIRRGKMKVN----VNHPSRGDTCPKVPLEKVTSTHALLKIPEPPLDTSKKQI---------------------------------------------
        LE+IRR KM V      N PS+GD CP+  L+KV+STHA LK  E PL  S +QI                                             
Subjt:  LEDIRRGKMKVN----VNHPSRGDTCPKVPLEKVTSTHALLKIPEPPLDTSKKQI---------------------------------------------

Query:  --------------------------------------------LSILSCEKNKAIDRKELEVAKLQDEVNTLESTLAITEEAIETLVTIRKSMEVVREE
                                                      +LS +K +AID++ELEVAKLQDEVNTLE T AITEEAIE L T+R+SME  R+E
Subjt:  --------------------------------------------LSILSCEKNKAIDRKELEVAKLQDEVNTLESTLAITEEAIETLVTIRKSMEVVREE

Query:  FKNFKWK
        FKNFKWK
Subjt:  FKNFKWK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCCTACCCTCCGAAAGAAGGCCGAGGATCACAAAGATGAGAGTGATAGTAGTAGTAGTAATCGTCACTGGAAAAGGCCATCGAACAAAGCAAAGACGTTCAATGA
TGATTCCTATGAGAGGTATTCTTTGACAATTCCTGAAGTTACAACACTACTGCAATGTAGTGATGAATCTTTGACAGGGCCTCATGGTGTGGATTCGACCCTTGAAGTGG
TCGATACCTCAAGATCACCAGTAGTTAAACCACCTGAACAATCTTTACGGCTCCCTGCCCTTCTTGAAGATATTCGACGTGGCAAGATGAAAGTGAATGTGAATCATCCA
TCTAGAGGAGATACCTGCCCCAAAGTGCCTTTAGAGAAGGTCACATCCACACATGCTCTTCTCAAGATTCCCGAGCCGCCTTTAGACACTTCTAAGAAGCAGATACTATC
GATCTTATCTTGTGAGAAAAATAAGGCCATAGATAGGAAAGAACTAGAAGTTGCCAAGCTCCAAGACGAAGTCAACACTCTTGAAAGCACCCTTGCTATCACTGAAGAAG
CCATCGAGACCCTAGTTACGATTCGTAAAAGTATGGAGGTTGTGCGTGAAGAATTCAAGAACTTCAAGTGGAAGAAAGACGAAGAGAGGAAAAGTAGGCGAGCCACAGTG
CAATTAGGCGTTCAAAAGAGCATCTGGCGAACAACCAGTACAACACTACGCGATGCTGACTCGCTAAAAGACAAGAATGATAGTTGGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCCTACCCTCCGAAAGAAGGCCGAGGATCACAAAGATGAGAGTGATAGTAGTAGTAGTAATCGTCACTGGAAAAGGCCATCGAACAAAGCAAAGACGTTCAATGA
TGATTCCTATGAGAGGTATTCTTTGACAATTCCTGAAGTTACAACACTACTGCAATGTAGTGATGAATCTTTGACAGGGCCTCATGGTGTGGATTCGACCCTTGAAGTGG
TCGATACCTCAAGATCACCAGTAGTTAAACCACCTGAACAATCTTTACGGCTCCCTGCCCTTCTTGAAGATATTCGACGTGGCAAGATGAAAGTGAATGTGAATCATCCA
TCTAGAGGAGATACCTGCCCCAAAGTGCCTTTAGAGAAGGTCACATCCACACATGCTCTTCTCAAGATTCCCGAGCCGCCTTTAGACACTTCTAAGAAGCAGATACTATC
GATCTTATCTTGTGAGAAAAATAAGGCCATAGATAGGAAAGAACTAGAAGTTGCCAAGCTCCAAGACGAAGTCAACACTCTTGAAAGCACCCTTGCTATCACTGAAGAAG
CCATCGAGACCCTAGTTACGATTCGTAAAAGTATGGAGGTTGTGCGTGAAGAATTCAAGAACTTCAAGTGGAAGAAAGACGAAGAGAGGAAAAGTAGGCGAGCCACAGTG
CAATTAGGCGTTCAAAAGAGCATCTGGCGAACAACCAGTACAACACTACGCGATGCTGACTCGCTAAAAGACAAGAATGATAGTTGGAGATGA
Protein sequenceShow/hide protein sequence
MVPTLRKKAEDHKDESDSSSSNRHWKRPSNKAKTFNDDSYERYSLTIPEVTTLLQCSDESLTGPHGVDSTLEVVDTSRSPVVKPPEQSLRLPALLEDIRRGKMKVNVNHP
SRGDTCPKVPLEKVTSTHALLKIPEPPLDTSKKQILSILSCEKNKAIDRKELEVAKLQDEVNTLESTLAITEEAIETLVTIRKSMEVVREEFKNFKWKKDEERKSRRATV
QLGVQKSIWRTTSTTLRDADSLKDKNDSWR