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PI0017307 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017307
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr11:9211542..9211949
RNA-Seq ExpressionPI0017307
SyntenyPI0017307
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025860.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]1.2e-1156.96Show/hide
Query:  TPSTGAEQALVACGDVVLESFKQLEEGEIEGSSVRQMLLVPSDGGKKDDFTPVTRKKRELVSLTDRGKRKSMQSLQNSF
        TPS   E A VACG VV+ESFKQLEEGEI+ S  R    +  + G++D+FT VTRKKRELVS+ DRGK   + ++ NSF
Subjt:  TPSTGAEQALVACGDVVLESFKQLEEGEIEGSSVRQMLLVPSDGGKKDDFTPVTRKKRELVSLTDRGKRKSMQSLQNSF

KAA0060724.1 hypothetical protein E6C27_scaffold72G00110 [Cucumis melo var. makuwa]1.4e-1058.33Show/hide
Query:  MSEATPSTGAEQALVACGDVVLESFKQLEEGEIEGSSVRQMLLVPSDGGKKDDFTPVTRKKRELVSLTDRGK
        +S+ +PS G       CG+VVLESFKQLEEGEI  S  R    V  + GK+DDFT VTRKKRELV + DRGK
Subjt:  MSEATPSTGAEQALVACGDVVLESFKQLEEGEIEGSSVRQMLLVPSDGGKKDDFTPVTRKKRELVSLTDRGK

TYK18951.1 uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa]4.4e-0960.94Show/hide
Query:  CGDVVLESFKQLEEGEIEGSSVRQMLLVPSDGGKKDDFTPVTRKKRELVSLTDRGKRKSMQSLQ
        CG+VVLESFKQLEEGEI  S  R    V    GK D+FT VTR+K ELVS+ DRGK+ S   LQ
Subjt:  CGDVVLESFKQLEEGEIEGSSVRQMLLVPSDGGKKDDFTPVTRKKRELVSLTDRGKRKSMQSLQ

TYK23423.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]3.0e-1051.72Show/hide
Query:  MSEATPSTGAEQALVACGDVVLESFKQLEEGEIEGSSVRQMLLVPSDGGKKDDFTPVTRKKRELVSLTDRGKRKSMQSLQNSFAVFL
        +S+  P  G       CG+VVLESFKQLEEGEI  S  R    V  + GK D+FT VTRKKRELVS+ DRGK   + ++ NSF   L
Subjt:  MSEATPSTGAEQALVACGDVVLESFKQLEEGEIEGSSVRQMLLVPSDGGKKDDFTPVTRKKRELVSLTDRGKRKSMQSLQNSFAVFL

TYK26642.1 uncharacterized protein E5676_scaffold313G002880 [Cucumis melo var. makuwa]6.8e-1057.75Show/hide
Query:  CGDVVLESFKQLEEGEIEGSSVRQMLLVPSDGGKKDDFTPVTRKKRELVSLTDRGKRKSMQSLQNSFAVFL
        CG+VVLESFKQLEEGEI  S  R    V  + GK D+FT VTRKK +LVS+ DRGKR  +  + NSF   L
Subjt:  CGDVVLESFKQLEEGEIEGSSVRQMLLVPSDGGKKDDFTPVTRKKRELVSLTDRGKRKSMQSLQNSFAVFL

TrEMBL top hitse value%identityAlignment
A0A5A7SI67 DUF4283 domain-containing protein6.0e-1256.96Show/hide
Query:  TPSTGAEQALVACGDVVLESFKQLEEGEIEGSSVRQMLLVPSDGGKKDDFTPVTRKKRELVSLTDRGKRKSMQSLQNSF
        TPS   E A VACG VV+ESFKQLEEGEI+ S  R    +  + G++D+FT VTRKKRELVS+ DRGK   + ++ NSF
Subjt:  TPSTGAEQALVACGDVVLESFKQLEEGEIEGSSVRQMLLVPSDGGKKDDFTPVTRKKRELVSLTDRGKRKSMQSLQNSF

A0A5A7TWG5 Reverse transcriptase domain-containing protein2.1e-0960.94Show/hide
Query:  CGDVVLESFKQLEEGEIEGSSVRQMLLVPSDGGKKDDFTPVTRKKRELVSLTDRGKRKSMQSLQ
        CG+VVLESFKQLEEGEI  S  R    V    GK D+FT VTR+K ELVS+ DRGK+ S   LQ
Subjt:  CGDVVLESFKQLEEGEIEGSSVRQMLLVPSDGGKKDDFTPVTRKKRELVSLTDRGKRKSMQSLQ

A0A5A7V084 Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein6.6e-1158.33Show/hide
Query:  MSEATPSTGAEQALVACGDVVLESFKQLEEGEIEGSSVRQMLLVPSDGGKKDDFTPVTRKKRELVSLTDRGK
        +S+ +PS G       CG+VVLESFKQLEEGEI  S  R    V  + GK+DDFT VTRKKRELV + DRGK
Subjt:  MSEATPSTGAEQALVACGDVVLESFKQLEEGEIEGSSVRQMLLVPSDGGKKDDFTPVTRKKRELVSLTDRGK

A0A5D3DIK9 DUF4283 domain-containing protein1.5e-1051.72Show/hide
Query:  MSEATPSTGAEQALVACGDVVLESFKQLEEGEIEGSSVRQMLLVPSDGGKKDDFTPVTRKKRELVSLTDRGKRKSMQSLQNSFAVFL
        +S+  P  G       CG+VVLESFKQLEEGEI  S  R    V  + GK D+FT VTRKKRELVS+ DRGK   + ++ NSF   L
Subjt:  MSEATPSTGAEQALVACGDVVLESFKQLEEGEIEGSSVRQMLLVPSDGGKKDDFTPVTRKKRELVSLTDRGKRKSMQSLQNSFAVFL

A0A5D3DT40 DUF4283 domain-containing protein3.3e-1057.75Show/hide
Query:  CGDVVLESFKQLEEGEIEGSSVRQMLLVPSDGGKKDDFTPVTRKKRELVSLTDRGKRKSMQSLQNSFAVFL
        CG+VVLESFKQLEEGEI  S  R    V  + GK D+FT VTRKK +LVS+ DRGKR  +  + NSF   L
Subjt:  CGDVVLESFKQLEEGEIEGSSVRQMLLVPSDGGKKDDFTPVTRKKRELVSLTDRGKRKSMQSLQNSFAVFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGAGGCTACCCCTAGTACGGGTGCTGAGCAGGCTCTTGTGGCTTGTGGGGATGTGGTGTTAGAATCCTTTAAGCAGTTAGAGGAAGGTGAGATTGAGGGTTCTTC
GGTTCGGCAGATGTTATTAGTTCCTAGTGATGGGGGTAAGAAGGATGATTTCACTCCTGTGACTCGTAAGAAGAGGGAGTTGGTTTCGTTGACAGATAGAGGGAAAAGAA
AGAGTATGCAGTCTCTGCAGAACTCTTTTGCAGTCTTTCTGATATGGGTGAGAAAGATAATTGGGCGTTGGCCTTATGGGTTAGTACTCCTCCACCCTTACAAATTGTGG
GCAGTGATGGTGGCATGTATATTGAGTCTAGATGGTGGTCCTATGGGGTCAATATGTGATGGTAGTTCCCATGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTGAGGCTACCCCTAGTACGGGTGCTGAGCAGGCTCTTGTGGCTTGTGGGGATGTGGTGTTAGAATCCTTTAAGCAGTTAGAGGAAGGTGAGATTGAGGGTTCTTC
GGTTCGGCAGATGTTATTAGTTCCTAGTGATGGGGGTAAGAAGGATGATTTCACTCCTGTGACTCGTAAGAAGAGGGAGTTGGTTTCGTTGACAGATAGAGGGAAAAGAA
AGAGTATGCAGTCTCTGCAGAACTCTTTTGCAGTCTTTCTGATATGGGTGAGAAAGATAATTGGGCGTTGGCCTTATGGGTTAGTACTCCTCCACCCTTACAAATTGTGG
GCAGTGATGGTGGCATGTATATTGAGTCTAGATGGTGGTCCTATGGGGTCAATATGTGATGGTAGTTCCCATGATTAG
Protein sequenceShow/hide protein sequence
MSEATPSTGAEQALVACGDVVLESFKQLEEGEIEGSSVRQMLLVPSDGGKKDDFTPVTRKKRELVSLTDRGKRKSMQSLQNSFAVFLIWVRKIIGRWPYGLVLLHPYKLW
AVMVACILSLDGGPMGSICDGSSHD