; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0017342 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017342
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr08:161935..163044
RNA-Seq ExpressionPI0017342
SyntenyPI0017342
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025724.1 uncharacterized protein E6C27_scaffold653G00030 [Cucumis melo var. makuwa]5.7e-6470.98Show/hide
Query:  IGGTSKPMAKPEGYDPALTHSENSRTPVGATTVTISSLVIKESPQRVKGTKSIATFEISHFCADNLITDLRRQTAITLWKNLRQKIICTPFERLGNLEPE
        I GTSKPMA PE     L  SENS+TP+GAT ++I  LV K SPQRV GTK I TFEISHFC DNLI+DLRR+TAITL ++LRQKIICTPFER+ +L+PE
Subjt:  IGGTSKPMAKPEGYDPALTHSENSRTPVGATTVTISSLVIKESPQRVKGTKSIATFEISHFCADNLITDLRRQTAITLWKNLRQKIICTPFERLGNLEPE

Query:  MHKIFDAIATSGSNNLTRLRELVDGYFRGVKNHNQIHSSISIQSMKDTQLKEAKDFVKTLGLDENRISKEAGTFKHRLARLSTKEAKLEAKLE
        M KIF AIATS SNNLT L+ELVDGYF+GV+NHNQ+ SSI +QS KD QL E K FVKTL LDENRI KE  T + RLARLS KEAKLEAKL+
Subjt:  MHKIFDAIATSGSNNLTRLRELVDGYFRGVKNHNQIHSSISIQSMKDTQLKEAKDFVKTLGLDENRISKEAGTFKHRLARLSTKEAKLEAKLE

KAA0050733.1 uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa]5.0e-6065Show/hide
Query:  LDDRVLHIGGTSKPMAKPEGYDPALTHSENSRTPVGATTVTISSLVIKESPQRVKGTKSIATFEISHFCADNLITDLRRQTAITLWKNLRQKIICTPFER
        +DD    I     PMA PE     L+ SENS+TP+GAT ++   LV K SPQRV GT+ I T EISHFCADNLI+DLR++TAITLW++LRQKII TPFER
Subjt:  LDDRVLHIGGTSKPMAKPEGYDPALTHSENSRTPVGATTVTISSLVIKESPQRVKGTKSIATFEISHFCADNLITDLRRQTAITLWKNLRQKIICTPFER

Query:  LGNLEPEMHKIFDAIATSGSNNLTRLRELVDGYFRGVKNHNQIHSSISIQSMKDTQLKEAKDFVKTLGLDENRISKEAGTFKHRLARLSTKEAKLEAKLE
        + +LEPEM KIF AIATSGSNNLT L+E+VDGYF+GV+NHNQ+ SSI +QS KD QL EAK FVKTL +D+NRI +E    + RLARLS KEAKLEAKL+
Subjt:  LGNLEPEMHKIFDAIATSGSNNLTRLRELVDGYFRGVKNHNQIHSSISIQSMKDTQLKEAKDFVKTLGLDENRISKEAGTFKHRLARLSTKEAKLEAKLE

TYK06155.1 uncharacterized protein E5676_scaffold287G00030 [Cucumis melo var. makuwa]1.4e-6270.47Show/hide
Query:  IGGTSKPMAKPEGYDPALTHSENSRTPVGATTVTISSLVIKESPQRVKGTKSIATFEISHFCADNLITDLRRQTAITLWKNLRQKIICTPFERLGNLEPE
        I GTSKPMA PE     L  SENS+TP+GAT ++I  LV K SPQRV GTK I TFEISHFC DNLI+DLRR+TAITL ++LRQKII TPFER+ +L+PE
Subjt:  IGGTSKPMAKPEGYDPALTHSENSRTPVGATTVTISSLVIKESPQRVKGTKSIATFEISHFCADNLITDLRRQTAITLWKNLRQKIICTPFERLGNLEPE

Query:  MHKIFDAIATSGSNNLTRLRELVDGYFRGVKNHNQIHSSISIQSMKDTQLKEAKDFVKTLGLDENRISKEAGTFKHRLARLSTKEAKLEAKLE
        M KIF AIATS SNNLT L+ELVDGYF+GV+NHNQ+ SSI +QS KD QL E K FVKTL LDENRI KE  T + RLARLS KEAKLEAKL+
Subjt:  MHKIFDAIATSGSNNLTRLRELVDGYFRGVKNHNQIHSSISIQSMKDTQLKEAKDFVKTLGLDENRISKEAGTFKHRLARLSTKEAKLEAKLE

XP_031739998.1 uncharacterized protein LOC116403342 [Cucumis sativus]3.1e-5761.32Show/hide
Query:  SPLDDRVLHIGGTSKPMAKPEGYDPALTHSE----------NSRTPVGATTVTISSLVIKESPQRVKGTKSIATFEISHFCADNLITDLRRQTAITLWKN
        S L D  LHI  T + M   E  +  L + E          NS+ P+GA  V+    VIK  PQ+V+GT+ I   EISHFCAD+LI+DLRRQ AITLW+N
Subjt:  SPLDDRVLHIGGTSKPMAKPEGYDPALTHSE----------NSRTPVGATTVTISSLVIKESPQRVKGTKSIATFEISHFCADNLITDLRRQTAITLWKN

Query:  LRQKIICTPFERLGNLEPEMHKIFDAIATSGSNNLTRLRELVDGYFRGVKNHNQIHSSISIQSMKDTQLKEAKDFVKTLGLDENRISKEAGTFKHRLARL
        LRQKII TPFERL +LEPEMHKIFDAIAT GS+NL  LRELV+GYF+GV+NHNQIHSS  +QS KD QL EAK FVKTL +DENRI  E  T K  L RL
Subjt:  LRQKIICTPFERLGNLEPEMHKIFDAIATSGSNNLTRLRELVDGYFRGVKNHNQIHSSISIQSMKDTQLKEAKDFVKTLGLDENRISKEAGTFKHRLARL

Query:  STKEAKLEAKLE
        S KEAKLEAKL+
Subjt:  STKEAKLEAKLE

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]2.7e-6164.08Show/hide
Query:  LIKWSPLDDRVLHIGGTSKPMAKPEGYDPALTHSENSRTPVGATTVTISSLVIKESPQRVKGTKSIATFEISHFCADNLITDLRRQTAITLWKNLRQKII
        +I  S L D  LHI  T + M   E  +  L+++ NS+ P+GA  V+    VIK  PQ+V+GT+ I   EISHFCAD+LI+DLRRQ AITLW+NLRQKII
Subjt:  LIKWSPLDDRVLHIGGTSKPMAKPEGYDPALTHSENSRTPVGATTVTISSLVIKESPQRVKGTKSIATFEISHFCADNLITDLRRQTAITLWKNLRQKII

Query:  CTPFERLGNLEPEMHKIFDAIATSGSNNLTRLRELVDGYFRGVKNHNQIHSSISIQSMKDTQLKEAKDFVKTLGLDENRISKEAGTFKHRLARLSTKEAK
         TPFERL +LEPEMHKIFDAIATSGS+NL  LRELV+GYF+GV+NHNQIHSS  +QS KD QL EAK FVKTL +DENRI  E  T K RL RLS KEAK
Subjt:  CTPFERLGNLEPEMHKIFDAIATSGSNNLTRLRELVDGYFRGVKNHNQIHSSISIQSMKDTQLKEAKDFVKTLGLDENRISKEAGTFKHRLARLSTKEAK

Query:  LEAKLE
        LEAKL+
Subjt:  LEAKLE

TrEMBL top hitse value%identityAlignment
A0A5A7SJ85 Uncharacterized protein2.8e-6470.98Show/hide
Query:  IGGTSKPMAKPEGYDPALTHSENSRTPVGATTVTISSLVIKESPQRVKGTKSIATFEISHFCADNLITDLRRQTAITLWKNLRQKIICTPFERLGNLEPE
        I GTSKPMA PE     L  SENS+TP+GAT ++I  LV K SPQRV GTK I TFEISHFC DNLI+DLRR+TAITL ++LRQKIICTPFER+ +L+PE
Subjt:  IGGTSKPMAKPEGYDPALTHSENSRTPVGATTVTISSLVIKESPQRVKGTKSIATFEISHFCADNLITDLRRQTAITLWKNLRQKIICTPFERLGNLEPE

Query:  MHKIFDAIATSGSNNLTRLRELVDGYFRGVKNHNQIHSSISIQSMKDTQLKEAKDFVKTLGLDENRISKEAGTFKHRLARLSTKEAKLEAKLE
        M KIF AIATS SNNLT L+ELVDGYF+GV+NHNQ+ SSI +QS KD QL E K FVKTL LDENRI KE  T + RLARLS KEAKLEAKL+
Subjt:  MHKIFDAIATSGSNNLTRLRELVDGYFRGVKNHNQIHSSISIQSMKDTQLKEAKDFVKTLGLDENRISKEAGTFKHRLARLSTKEAKLEAKLE

A0A5A7U4C3 Uncharacterized protein2.4e-6065Show/hide
Query:  LDDRVLHIGGTSKPMAKPEGYDPALTHSENSRTPVGATTVTISSLVIKESPQRVKGTKSIATFEISHFCADNLITDLRRQTAITLWKNLRQKIICTPFER
        +DD    I     PMA PE     L+ SENS+TP+GAT ++   LV K SPQRV GT+ I T EISHFCADNLI+DLR++TAITLW++LRQKII TPFER
Subjt:  LDDRVLHIGGTSKPMAKPEGYDPALTHSENSRTPVGATTVTISSLVIKESPQRVKGTKSIATFEISHFCADNLITDLRRQTAITLWKNLRQKIICTPFER

Query:  LGNLEPEMHKIFDAIATSGSNNLTRLRELVDGYFRGVKNHNQIHSSISIQSMKDTQLKEAKDFVKTLGLDENRISKEAGTFKHRLARLSTKEAKLEAKLE
        + +LEPEM KIF AIATSGSNNLT L+E+VDGYF+GV+NHNQ+ SSI +QS KD QL EAK FVKTL +D+NRI +E    + RLARLS KEAKLEAKL+
Subjt:  LGNLEPEMHKIFDAIATSGSNNLTRLRELVDGYFRGVKNHNQIHSSISIQSMKDTQLKEAKDFVKTLGLDENRISKEAGTFKHRLARLSTKEAKLEAKLE

A0A5D3C453 Uncharacterized protein6.8e-6370.47Show/hide
Query:  IGGTSKPMAKPEGYDPALTHSENSRTPVGATTVTISSLVIKESPQRVKGTKSIATFEISHFCADNLITDLRRQTAITLWKNLRQKIICTPFERLGNLEPE
        I GTSKPMA PE     L  SENS+TP+GAT ++I  LV K SPQRV GTK I TFEISHFC DNLI+DLRR+TAITL ++LRQKII TPFER+ +L+PE
Subjt:  IGGTSKPMAKPEGYDPALTHSENSRTPVGATTVTISSLVIKESPQRVKGTKSIATFEISHFCADNLITDLRRQTAITLWKNLRQKIICTPFERLGNLEPE

Query:  MHKIFDAIATSGSNNLTRLRELVDGYFRGVKNHNQIHSSISIQSMKDTQLKEAKDFVKTLGLDENRISKEAGTFKHRLARLSTKEAKLEAKLE
        M KIF AIATS SNNLT L+ELVDGYF+GV+NHNQ+ SSI +QS KD QL E K FVKTL LDENRI KE  T + RLARLS KEAKLEAKL+
Subjt:  MHKIFDAIATSGSNNLTRLRELVDGYFRGVKNHNQIHSSISIQSMKDTQLKEAKDFVKTLGLDENRISKEAGTFKHRLARLSTKEAKLEAKLE

A0A5D3DF65 Uncharacterized protein7.3e-5758.6Show/hide
Query:  NNPSGKLRGVHVWQMIRLLLH--DLNSLTKIVLIKWSPLDDRVLHIGGTSKPMAKPEGYDPALTHSENSRTPVGATTVTISSLVIKESPQRVKGTKSIAT
        +N    L  VH W  +    H     SL    ++++S   D VL+IG TSK +A P+G D  L +SEN +TP+ ATTV+   LVIKE  QRV G KSI  
Subjt:  NNPSGKLRGVHVWQMIRLLLH--DLNSLTKIVLIKWSPLDDRVLHIGGTSKPMAKPEGYDPALTHSENSRTPVGATTVTISSLVIKESPQRVKGTKSIAT

Query:  FEISHFCADNLITDLRRQTAITLWKNLRQKIICTPFERLGNLEPEMHKIFDAIATSGSNNLTRLRELVDGYFRGVKNHNQIHSSISIQSMKDTQLKEAKD
        FEISHF A NLI+DLRRQTAITLW+NL+QKI+ T FE++  L+PEM+KIFDAIATSGSNNLT L+EL+DGYF+ VKNHNQ+HS+I +QS KDTQL +AK 
Subjt:  FEISHFCADNLITDLRRQTAITLWKNLRQKIICTPFERLGNLEPEMHKIFDAIATSGSNNLTRLRELVDGYFRGVKNHNQIHSSISIQSMKDTQLKEAKD

Query:  FVKTLGLDENRISKE
        F+KTL LDEN + KE
Subjt:  FVKTLGLDENRISKE

A0A5D3DHK0 Uncharacterized protein2.5e-5762.38Show/hide
Query:  SPLDDRVLHIGGTSKPMAKPEGYDPALTHSENSRTPVGATTVTISSLVIKESPQRVKGTKSIATFEISHFCADNLITDLRRQTAITLWKNLRQKIICTPF
        S L D VL I GTSKPM  PE     L+ SENS+ P+GAT ++   LVIK SPQRV+G K I   EISHFCADNLI+DL+R+T ITLW++LRQKII T F
Subjt:  SPLDDRVLHIGGTSKPMAKPEGYDPALTHSENSRTPVGATTVTISSLVIKESPQRVKGTKSIATFEISHFCADNLITDLRRQTAITLWKNLRQKIICTPF

Query:  ERLGNLEPEMHKIFDAIATSGSNNLTRLRELVDGYFRGVKNHNQIHSSISIQSMKDTQLKEAKDFVKTLGLDENRISKEAGTFKHRLARLSTKEAKLEAK
        ER+ NLE EMHKIFDAI TS SN+L  LRELV GYF+GV+NHNQ+HSSI +QS KD QL + K FV+ L LDEN I ++    +  LA+LS KEAKLE K
Subjt:  ERLGNLEPEMHKIFDAIATSGSNNLTRLRELVDGYFRGVKNHNQIHSSISIQSMKDTQLKEAKDFVKTLGLDENRISKEAGTFKHRLARLSTKEAKLEAK

Query:  LE
        L+
Subjt:  LE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAACCTAAACCCATCAAGAAAATCGAGAATGATTTTGGAAGTGGGAGCAAGAGGATATGCTCTTCTGGAATTGAAGAACAACCCGTCGGGCAAATTAAGGGGGGT
ACATGTTTGGCAGATGATTCGACTCCTCCTGCACGATCTAAACTCCCTGACAAAGATAGTGCTGATAAAGTGGTCGCCTTTAGATGATCGCGTCCTACATATTGGTGGAA
CCTCAAAGCCGATGGCAAAACCAGAAGGCTATGACCCTGCACTTACTCATAGTGAGAACTCCAGGACACCTGTAGGTGCAACTACCGTGACGATTAGTTCTCTTGTGATC
AAGGAGTCCCCTCAACGGGTGAAAGGAACGAAGTCTATTGCAACTTTTGAGATTTCCCATTTTTGCGCGGACAACTTAATTACTGATCTCCGTCGACAGACTGCCATAAC
CTTATGGAAAAACCTACGACAAAAGATCATTTGTACCCCTTTTGAGCGATTAGGTAACCTTGAACCAGAGATGCATAAAATCTTTGATGCAATTGCGACCAGTGGCAGCA
ACAACCTCACCCGTTTGAGAGAACTTGTGGATGGCTACTTCCGAGGTGTCAAGAACCATAATCAAATACACTCCTCAATTTCAATCCAGTCAATGAAAGATACTCAGCTA
AAGGAGGCGAAAGATTTTGTGAAGACGTTGGGACTTGATGAGAACCGTATATCGAAGGAGGCAGGCACCTTCAAACATCGGCTTGCACGATTATCCACAAAGGAAGCTAA
ACTTGAAGCTAAACTTGAAGCAAAACTTAAAGTCGTACACTCTCCAACAAACTTTCTAGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAACCTAAACCCATCAAGAAAATCGAGAATGATTTTGGAAGTGGGAGCAAGAGGATATGCTCTTCTGGAATTGAAGAACAACCCGTCGGGCAAATTAAGGGGGGT
ACATGTTTGGCAGATGATTCGACTCCTCCTGCACGATCTAAACTCCCTGACAAAGATAGTGCTGATAAAGTGGTCGCCTTTAGATGATCGCGTCCTACATATTGGTGGAA
CCTCAAAGCCGATGGCAAAACCAGAAGGCTATGACCCTGCACTTACTCATAGTGAGAACTCCAGGACACCTGTAGGTGCAACTACCGTGACGATTAGTTCTCTTGTGATC
AAGGAGTCCCCTCAACGGGTGAAAGGAACGAAGTCTATTGCAACTTTTGAGATTTCCCATTTTTGCGCGGACAACTTAATTACTGATCTCCGTCGACAGACTGCCATAAC
CTTATGGAAAAACCTACGACAAAAGATCATTTGTACCCCTTTTGAGCGATTAGGTAACCTTGAACCAGAGATGCATAAAATCTTTGATGCAATTGCGACCAGTGGCAGCA
ACAACCTCACCCGTTTGAGAGAACTTGTGGATGGCTACTTCCGAGGTGTCAAGAACCATAATCAAATACACTCCTCAATTTCAATCCAGTCAATGAAAGATACTCAGCTA
AAGGAGGCGAAAGATTTTGTGAAGACGTTGGGACTTGATGAGAACCGTATATCGAAGGAGGCAGGCACCTTCAAACATCGGCTTGCACGATTATCCACAAAGGAAGCTAA
ACTTGAAGCTAAACTTGAAGCAAAACTTAAAGTCGTACACTCTCCAACAAACTTTCTAGCCTAA
Protein sequenceShow/hide protein sequence
MSNLNPSRKSRMILEVGARGYALLELKNNPSGKLRGVHVWQMIRLLLHDLNSLTKIVLIKWSPLDDRVLHIGGTSKPMAKPEGYDPALTHSENSRTPVGATTVTISSLVI
KESPQRVKGTKSIATFEISHFCADNLITDLRRQTAITLWKNLRQKIICTPFERLGNLEPEMHKIFDAIATSGSNNLTRLRELVDGYFRGVKNHNQIHSSISIQSMKDTQL
KEAKDFVKTLGLDENRISKEAGTFKHRLARLSTKEAKLEAKLEAKLKVVHSPTNFLA