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PI0017362 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017362
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTransposase
Genome locationchr11:18334470..18335727
RNA-Seq ExpressionPI0017362
SyntenyPI0017362
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047527.1 transposase [Cucumis melo var. makuwa]3.3e-4754.95Show/hide
Query:  RVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNIVEN----------------------------------KRK
        R R EGERK+VEYNEDGVPI ENGTKLNSFI  CV+YHI I YA+W +V  +LK+KIY IV+N                                  KRK
Subjt:  RVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNIVEN----------------------------------KRK

Query:  LQQERRKKNKYSHRLSRKGYANLREELDEISKTCVDKESSLNNCS----GRVRGVGGFATQ------TKRSEEIEKLSQENEKRCLRLKELEDIHISTQS
        LQQERRK NKY+HRLSRK YANLREEL    K    +ES L+  S     RV   G +  +       + +EEI+KLS+ENEK  LR++ELE+IHISTQS
Subjt:  LQQERRKKNKYSHRLSRKGYANLREELDEISKTCVDKESSLNNCS----GRVRGVGGFATQ------TKRSEEIEKLSQENEKRCLRLKELEDIHISTQS

Query:  KPTSAHGSCSRPRLEYEIQCKK
         PTSAHGSCSRPRLEY+IQCKK
Subjt:  KPTSAHGSCSRPRLEYEIQCKK

KAA0054128.1 pol protein [Cucumis melo var. makuwa]4.3e-4748.66Show/hide
Query:  RVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNIVEN-------------------------------------
        R R  GERK+VEYNEDGVPI ENG KLNSFI  CVHYHI I YA+W +V  +LK+KIY IVE                                      
Subjt:  RVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNIVEN-------------------------------------

Query:  ----------------------------------KRKLQQERRKKNKYSHRLSRKGYANLREELDEISKTCVDKESSLNN----------CSGRVRGVGG
                                          KRKLQQERRKKNKY+HRLSRKGYANLREEL++ISKTC DKE S N+           SGRVRGVGG
Subjt:  ----------------------------------KRKLQQERRKKNKYSHRLSRKGYANLREELDEISKTCVDKESSLNN----------CSGRVRGVGG

Query:  FATQT----------KRSEEIEKLSQENEKRCLRLKELEDIHISTQSKPTSAHGSCSRPRL
        F T +          KR+EEI+KLS+ENEK  LR++ELE+IHISTQS PTSAHGSCS+ ++
Subjt:  FATQT----------KRSEEIEKLSQENEKRCLRLKELEDIHISTQSKPTSAHGSCSRPRL

KAA0066037.1 hypothetical protein E6C27_scaffold21G00090 [Cucumis melo var. makuwa]4.6e-4947.52Show/hide
Query:  MSNVTRVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNIV----------------------------------
        M +VTRVRSEGERK+VEYNEDGVPI ENG KLNSFI  CVHY+I I YA+W +V  +LK+KIY IV                                  
Subjt:  MSNVTRVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNIV----------------------------------

Query:  --------------------------ENKRKLQQERRKKNKYSHRLSRKGYANLREEL---------------------------------------DEI
                                  E+KRKLQQERRKKNKY+HRLSRKGYANLREEL                                       DEI
Subjt:  --------------------------ENKRKLQQERRKKNKYSHRLSRKGYANLREEL---------------------------------------DEI

Query:  SKTCVDKESSLNNCSGRVRGVGGFATQTKRSEEIEKLSQENEKRCLRLKELEDIHISTQSKPTSAHGSCSRPRLEYEIQCKK
        SKTC DKE S N+   +           KR+EEI+KLS+ENEK  LR++ELE+IHISTQS PTSAHGSCSRPRLEY+IQCKK
Subjt:  SKTCVDKESSLNNCSGRVRGVGGFATQTKRSEEIEKLSQENEKRCLRLKELEDIHISTQSKPTSAHGSCSRPRLEYEIQCKK

TYK26496.1 transposase [Cucumis melo var. makuwa]2.1e-4654.5Show/hide
Query:  RVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNIVEN----------------------------------KRK
        R R  GERK+VEYNEDGVPI ENGTKLNSFI  CV+YHI I YA+W +V  +LK+KIY IV+N                                  KRK
Subjt:  RVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNIVEN----------------------------------KRK

Query:  LQQERRKKNKYSHRLSRKGYANLREELDEISKTCVDKESSLNNCS----GRVRGVGGFATQ------TKRSEEIEKLSQENEKRCLRLKELEDIHISTQS
        LQQERRK NKY+HRLSRK YANLREEL    K    +ES L+  S     RV   G +  +       + +EEI+KLS+ENEK  LR++ELE+IHISTQS
Subjt:  LQQERRKKNKYSHRLSRKGYANLREELDEISKTCVDKESSLNNCS----GRVRGVGGFATQ------TKRSEEIEKLSQENEKRCLRLKELEDIHISTQS

Query:  KPTSAHGSCSRPRLEYEIQCKK
         PTSAHGSCSRPRLEY+IQCKK
Subjt:  KPTSAHGSCSRPRLEYEIQCKK

TYK30021.1 hypothetical protein E5676_scaffold587G00260 [Cucumis melo var. makuwa]3.7e-5146.56Show/hide
Query:  MSNVTRVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNIV----------------------------------
        M +VTRVRS+GERK+VEYNEDGVPI ENG KLNSFI  CVHYHI I YA+W +V V+ K+KIY  V                                  
Subjt:  MSNVTRVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNIV----------------------------------

Query:  -------------------------------------ENKRKLQQERRKKNKYSHRLSRKGYANLREEL-------------------------------
                                             E+KRKLQQERRKKNKY+HRLSRKGYANLREEL                               
Subjt:  -------------------------------------ENKRKLQQERRKKNKYSHRLSRKGYANLREEL-------------------------------

Query:  DEISKTCVDKESSLNN----------CSGRVRGVGGFATQT----------KRSEEIEKLSQENEKRCLRLKELEDIHISTQSKPTSAHGSCSRPRLEYE
        DEISKTC DKE S N+           S RVRGVGGF T T          KR+E+I+KLS+ENEK  L ++ELE+IHISTQS PTSAHGSCSRPRLEY+
Subjt:  DEISKTCVDKESSLNN----------CSGRVRGVGGFATQT----------KRSEEIEKLSQENEKRCLRLKELEDIHISTQSKPTSAHGSCSRPRLEYE

Query:  IQCKK
        IQCKK
Subjt:  IQCKK

TrEMBL top hitse value%identityAlignment
A0A5A7U006 Transposase1.6e-4754.95Show/hide
Query:  RVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNIVEN----------------------------------KRK
        R R EGERK+VEYNEDGVPI ENGTKLNSFI  CV+YHI I YA+W +V  +LK+KIY IV+N                                  KRK
Subjt:  RVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNIVEN----------------------------------KRK

Query:  LQQERRKKNKYSHRLSRKGYANLREELDEISKTCVDKESSLNNCS----GRVRGVGGFATQ------TKRSEEIEKLSQENEKRCLRLKELEDIHISTQS
        LQQERRK NKY+HRLSRK YANLREEL    K    +ES L+  S     RV   G +  +       + +EEI+KLS+ENEK  LR++ELE+IHISTQS
Subjt:  LQQERRKKNKYSHRLSRKGYANLREELDEISKTCVDKESSLNNCS----GRVRGVGGFATQ------TKRSEEIEKLSQENEKRCLRLKELEDIHISTQS

Query:  KPTSAHGSCSRPRLEYEIQCKK
         PTSAHGSCSRPRLEY+IQCKK
Subjt:  KPTSAHGSCSRPRLEYEIQCKK

A0A5A7VG24 DUF4218 domain-containing protein2.2e-4947.52Show/hide
Query:  MSNVTRVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNIV----------------------------------
        M +VTRVRSEGERK+VEYNEDGVPI ENG KLNSFI  CVHY+I I YA+W +V  +LK+KIY IV                                  
Subjt:  MSNVTRVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNIV----------------------------------

Query:  --------------------------ENKRKLQQERRKKNKYSHRLSRKGYANLREEL---------------------------------------DEI
                                  E+KRKLQQERRKKNKY+HRLSRKGYANLREEL                                       DEI
Subjt:  --------------------------ENKRKLQQERRKKNKYSHRLSRKGYANLREEL---------------------------------------DEI

Query:  SKTCVDKESSLNNCSGRVRGVGGFATQTKRSEEIEKLSQENEKRCLRLKELEDIHISTQSKPTSAHGSCSRPRLEYEIQCKK
        SKTC DKE S N+   +           KR+EEI+KLS+ENEK  LR++ELE+IHISTQS PTSAHGSCSRPRLEY+IQCKK
Subjt:  SKTCVDKESSLNNCSGRVRGVGGFATQTKRSEEIEKLSQENEKRCLRLKELEDIHISTQSKPTSAHGSCSRPRLEYEIQCKK

A0A5D3DCP7 Transposase9.9e-4257.59Show/hide
Query:  MSNVTRVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNIVENKRKLQQERRKKNKYS----HRLSRKG-YAN--
        M + TRVRSE ERK+VEYN DGVPI ENG KLNSFI  CVHYHISI YA+W +V  +LK+KIY IVE  + +  E  + ++ S     R+ +KG Y N  
Subjt:  MSNVTRVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNIVENKRKLQQERRKKNKYS----HRLSRKG-YAN--

Query:  LREELD-EISKTCVDKESSLNNCSGRVRGVGGFATQTKRSEEIEKLSQENEKRCLRLKELEDIHISTQSKPTSAHGSCSRPRLEYEIQCKK
        ++E ++ EISKTC DKE S NN   +           KR+EEI+KLS+ENEK  LR++ELE+IHISTQS PT AHGSCSRPRLEY+IQCK+
Subjt:  LREELD-EISKTCVDKESSLNNCSGRVRGVGGFATQTKRSEEIEKLSQENEKRCLRLKELEDIHISTQSKPTSAHGSCSRPRLEYEIQCKK

A0A5D3DS40 Transposase1.0e-4654.5Show/hide
Query:  RVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNIVEN----------------------------------KRK
        R R  GERK+VEYNEDGVPI ENGTKLNSFI  CV+YHI I YA+W +V  +LK+KIY IV+N                                  KRK
Subjt:  RVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNIVEN----------------------------------KRK

Query:  LQQERRKKNKYSHRLSRKGYANLREELDEISKTCVDKESSLNNCS----GRVRGVGGFATQ------TKRSEEIEKLSQENEKRCLRLKELEDIHISTQS
        LQQERRK NKY+HRLSRK YANLREEL    K    +ES L+  S     RV   G +  +       + +EEI+KLS+ENEK  LR++ELE+IHISTQS
Subjt:  LQQERRKKNKYSHRLSRKGYANLREELDEISKTCVDKESSLNNCS----GRVRGVGGFATQ------TKRSEEIEKLSQENEKRCLRLKELEDIHISTQS

Query:  KPTSAHGSCSRPRLEYEIQCKK
         PTSAHGSCSRPRLEY+IQCKK
Subjt:  KPTSAHGSCSRPRLEYEIQCKK

A0A5D3E359 Uncharacterized protein1.8e-5146.56Show/hide
Query:  MSNVTRVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNIV----------------------------------
        M +VTRVRS+GERK+VEYNEDGVPI ENG KLNSFI  CVHYHI I YA+W +V V+ K+KIY  V                                  
Subjt:  MSNVTRVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNIV----------------------------------

Query:  -------------------------------------ENKRKLQQERRKKNKYSHRLSRKGYANLREEL-------------------------------
                                             E+KRKLQQERRKKNKY+HRLSRKGYANLREEL                               
Subjt:  -------------------------------------ENKRKLQQERRKKNKYSHRLSRKGYANLREEL-------------------------------

Query:  DEISKTCVDKESSLNN----------CSGRVRGVGGFATQT----------KRSEEIEKLSQENEKRCLRLKELEDIHISTQSKPTSAHGSCSRPRLEYE
        DEISKTC DKE S N+           S RVRGVGGF T T          KR+E+I+KLS+ENEK  L ++ELE+IHISTQS PTSAHGSCSRPRLEY+
Subjt:  DEISKTCVDKESSLNN----------CSGRVRGVGGFATQT----------KRSEEIEKLSQENEKRCLRLKELEDIHISTQSKPTSAHGSCSRPRLEYE

Query:  IQCKK
        IQCKK
Subjt:  IQCKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAATGTTACACGTGTTAGAAGTGAAGGTGAGAGGAAGGTGGTGGAATACAATGAAGATGGAGTACCCATTGAAGAAAATGGGACAAAACTAAACTCTTTCATTTG
GTTGTGTGTACACTACCACATCTCCATTAACTATGCATCATGGAGAGAAGTGCATGTTAAATTGAAGGACAAAATCTATAACATAGTTGAGAACAAAAGAAAACTTCAAC
AAGAGAGACGGAAGAAGAACAAGTATAGCCATCGACTTTCAAGAAAAGGTTATGCTAATCTACGAGAGGAATTGGATGAAATCTCAAAGACTTGTGTTGACAAAGAGTCA
TCTCTAAACAATTGTAGTGGACGTGTACGTGGTGTTGGCGGGTTTGCCACCCAAACTAAACGGAGTGAAGAAATTGAGAAGCTTAGTCAAGAGAATGAAAAGCGTTGTTT
GCGACTTAAAGAATTAGAGGATATTCACATATCAACACAATCTAAACCGACATCTGCACATGGATCTTGCTCAAGACCAAGATTGGAATATGAGATTCAATGTAAAAAAA
AAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTAATGTTACACGTGTTAGAAGTGAAGGTGAGAGGAAGGTGGTGGAATACAATGAAGATGGAGTACCCATTGAAGAAAATGGGACAAAACTAAACTCTTTCATTTG
GTTGTGTGTACACTACCACATCTCCATTAACTATGCATCATGGAGAGAAGTGCATGTTAAATTGAAGGACAAAATCTATAACATAGTTGAGAACAAAAGAAAACTTCAAC
AAGAGAGACGGAAGAAGAACAAGTATAGCCATCGACTTTCAAGAAAAGGTTATGCTAATCTACGAGAGGAATTGGATGAAATCTCAAAGACTTGTGTTGACAAAGAGTCA
TCTCTAAACAATTGTAGTGGACGTGTACGTGGTGTTGGCGGGTTTGCCACCCAAACTAAACGGAGTGAAGAAATTGAGAAGCTTAGTCAAGAGAATGAAAAGCGTTGTTT
GCGACTTAAAGAATTAGAGGATATTCACATATCAACACAATCTAAACCGACATCTGCACATGGATCTTGCTCAAGACCAAGATTGGAATATGAGATTCAATGTAAAAAAA
AAAACTGA
Protein sequenceShow/hide protein sequence
MSNVTRVRSEGERKVVEYNEDGVPIEENGTKLNSFIWLCVHYHISINYASWREVHVKLKDKIYNIVENKRKLQQERRKKNKYSHRLSRKGYANLREELDEISKTCVDKES
SLNNCSGRVRGVGGFATQTKRSEEIEKLSQENEKRCLRLKELEDIHISTQSKPTSAHGSCSRPRLEYEIQCKKKN