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PI0017363 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017363
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr02:12696137..12696964
RNA-Seq ExpressionPI0017363
SyntenyPI0017363
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031701.1 hypothetical protein E6C27_scaffold139G004850 [Cucumis melo var. makuwa]2.0e-2643.58Show/hide
Query:  IVEELKDELEAMSPLDQGPPPRKQREVVGPSKGKKKSGSSGPEEHPSGGEAKTKTPSINSFIK----AFGWKKLFKGHTKLRLGVVEKFYAAKLNVEEFS
        + EELK E+EAMS           +E++      ++ G   P       EA++  P +    K    AFGW+K FKG +K+RL VV KFYA+  N  E+ 
Subjt:  IVEELKDELEAMSPLDQGPPPRKQREVVGPSKGKKKSGSSGPEEHPSGGEAKTKTPSINSFIK----AFGWKKLFKGHTKLRLGVVEKFYAAKLNVEEFS

Query:  VEISGKTMNFNAEAINDLYELPNDVEMPRQEYVVSPTRKMAREALEVIVCPGAAWEITPTGKYQLYPHQLTIEASVWLF
          +  K+  FN EAIN LY  P D E P    + +  ++ A EALE I   GA ++ITPTGKY LYPHQLTIEASVWLF
Subjt:  VEISGKTMNFNAEAINDLYELPNDVEMPRQEYVVSPTRKMAREALEVIVCPGAAWEITPTGKYQLYPHQLTIEASVWLF

KAA0048500.1 protein MNN4-like [Cucumis melo var. makuwa]4.5e-2334.43Show/hide
Query:  LRIKMLANLSEQVAELPTKMKALEPEIDLEVIVEELKDELEAMSPLDQ---GPPPRKQREVVGPS--KGKKKSGSSGPEEHPSGGEA-------------
        L+IK+ A   + +AE   + K    E   +   +E + ELE +SPL+       P+K+R + G    K +KK+ +   E+     E              
Subjt:  LRIKMLANLSEQVAELPTKMKALEPEIDLEVIVEELKDELEAMSPLDQ---GPPPRKQREVVGPS--KGKKKSGSSGPEEHPSGGEA-------------

Query:  ---------KTKTP-SINSFIKAFGWKKLFKGHTKLRLGVVEKFYAAKLNVEEFSVEISGKTMNFNAEAINDLYEL-PNDVEMPRQEYVVSPTRKMAREA
                 K + P  + S IKA  WK+ F+G T +R  V+  FY   +N E     + GK +NF  + +N LY L    VE P       P+    + A
Subjt:  ---------KTKTP-SINSFIKAFGWKKLFKGHTKLRLGVVEKFYAAKLNVEEFSVEISGKTMNFNAEAINDLYEL-PNDVEMPRQEYVVSPTRKMAREA

Query:  LEVIVCPGAAWEITPTGKYQLYPHQLTIEASVWLFFIKKKIFPTHHDSTINLESTMLLCCIMTKKRVNLGDLI
        LE +  PG  W+ITP  KYQL+PH L   ASVWL FIKK + PT HD+TI+LE  MLL CIM +  +N+ ++I
Subjt:  LEVIVCPGAAWEITPTGKYQLYPHQLTIEASVWLFFIKKKIFPTHHDSTINLESTMLLCCIMTKKRVNLGDLI

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]2.7e-2847.59Show/hide
Query:  KLRLGVVEKFYAAKLNVEEFSVEISGKTMNFNAEAINDLYELPNDVEMPRQEYVVSPTRKMAREALEVIVCPGAAWEITPTG-KYQLYPHQLTIEASVWL
        K+R+ VV KFY  K N  +  + I  +   FN E IN+LY  PND E   QE V   T+ +A+EAL+V+  PG   E+ P   +YQLYPH LT +A+VW+
Subjt:  KLRLGVVEKFYAAKLNVEEFSVEISGKTMNFNAEAINDLYELPNDVEMPRQEYVVSPTRKMAREALEVIVCPGAAWEITPTG-KYQLYPHQLTIEASVWL

Query:  FFIKKKIFPTHHDSTINLESTMLLCCIMTKKRVNLGDLIATSILS
        FF K KIFPT +DSTI+++ T++L CIM KK +NL ++I  +IL+
Subjt:  FFIKKKIFPTHHDSTINLESTMLLCCIMTKKRVNLGDLIATSILS

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]2.2e-2250Show/hide
Query:  ISGKTMNFNAEAINDLYELPNDV-EMPRQEYVVSPTRKMAREALEVIVCPGAAWEITPTGKYQLYPHQLTIEASVWLFFIKKKIFPTHHDSTINLESTML
        +  + + F  E IN+LY+LPND+   P Q  +V      A++ +++IV P A    TPT + QL+PHQLTIEA+VWLFFIKKKIFPTHHDSTI  E  ++
Subjt:  ISGKTMNFNAEAINDLYELPNDV-EMPRQEYVVSPTRKMAREALEVIVCPGAAWEITPTGKYQLYPHQLTIEASVWLFFIKKKIFPTHHDSTINLESTML

Query:  LCCIMTKKRVNLGDLIATSILS
        L CI  KK  NLG ++  + LS
Subjt:  LCCIMTKKRVNLGDLIATSILS

TYK22187.1 hypothetical protein E5676_scaffold333G00570 [Cucumis melo var. makuwa]1.5e-2145.19Show/hide
Query:  FYAAKLNVEEFSVEISGKTMNFNAEAINDLYELPNDVE-MPRQEYVVSPTRKMAREALEVIVCPGAAWEITPTGKYQLYPHQLTIEASVWLFFIKKKIFP
        FYAAK +  E  V +  K ++F  E IN+LY L ND++  P Q  +  PT+  +R  +++I   GA W  T T   QLYPHQLT EA+VWL FIKKKI P
Subjt:  FYAAKLNVEEFSVEISGKTMNFNAEAINDLYELPNDVE-MPRQEYVVSPTRKMAREALEVIVCPGAAWEITPTGKYQLYPHQLTIEASVWLFFIKKKIFP

Query:  THHDSTINLESTMLLCCIMTKKRVNLGDLIATSIL
          +DST+ +E  +LL C M K+  NLG ++  + L
Subjt:  THHDSTINLESTMLLCCIMTKKRVNLGDLIATSIL

TrEMBL top hitse value%identityAlignment
A0A5A7SQ81 Uncharacterized protein9.5e-2743.58Show/hide
Query:  IVEELKDELEAMSPLDQGPPPRKQREVVGPSKGKKKSGSSGPEEHPSGGEAKTKTPSINSFIK----AFGWKKLFKGHTKLRLGVVEKFYAAKLNVEEFS
        + EELK E+EAMS           +E++      ++ G   P       EA++  P +    K    AFGW+K FKG +K+RL VV KFYA+  N  E+ 
Subjt:  IVEELKDELEAMSPLDQGPPPRKQREVVGPSKGKKKSGSSGPEEHPSGGEAKTKTPSINSFIK----AFGWKKLFKGHTKLRLGVVEKFYAAKLNVEEFS

Query:  VEISGKTMNFNAEAINDLYELPNDVEMPRQEYVVSPTRKMAREALEVIVCPGAAWEITPTGKYQLYPHQLTIEASVWLF
          +  K+  FN EAIN LY  P D E P    + +  ++ A EALE I   GA ++ITPTGKY LYPHQLTIEASVWLF
Subjt:  VEISGKTMNFNAEAINDLYELPNDVEMPRQEYVVSPTRKMAREALEVIVCPGAAWEITPTGKYQLYPHQLTIEASVWLF

A0A5A7TZE0 Protein MNN4-like2.2e-2334.43Show/hide
Query:  LRIKMLANLSEQVAELPTKMKALEPEIDLEVIVEELKDELEAMSPLDQ---GPPPRKQREVVGPS--KGKKKSGSSGPEEHPSGGEA-------------
        L+IK+ A   + +AE   + K    E   +   +E + ELE +SPL+       P+K+R + G    K +KK+ +   E+     E              
Subjt:  LRIKMLANLSEQVAELPTKMKALEPEIDLEVIVEELKDELEAMSPLDQ---GPPPRKQREVVGPS--KGKKKSGSSGPEEHPSGGEA-------------

Query:  ---------KTKTP-SINSFIKAFGWKKLFKGHTKLRLGVVEKFYAAKLNVEEFSVEISGKTMNFNAEAINDLYEL-PNDVEMPRQEYVVSPTRKMAREA
                 K + P  + S IKA  WK+ F+G T +R  V+  FY   +N E     + GK +NF  + +N LY L    VE P       P+    + A
Subjt:  ---------KTKTP-SINSFIKAFGWKKLFKGHTKLRLGVVEKFYAAKLNVEEFSVEISGKTMNFNAEAINDLYEL-PNDVEMPRQEYVVSPTRKMAREA

Query:  LEVIVCPGAAWEITPTGKYQLYPHQLTIEASVWLFFIKKKIFPTHHDSTINLESTMLLCCIMTKKRVNLGDLI
        LE +  PG  W+ITP  KYQL+PH L   ASVWL FIKK + PT HD+TI+LE  MLL CIM +  +N+ ++I
Subjt:  LEVIVCPGAAWEITPTGKYQLYPHQLTIEASVWLFFIKKKIFPTHHDSTINLESTMLLCCIMTKKRVNLGDLI

A0A5A7V6M5 Gag/pol protein1.3e-2847.59Show/hide
Query:  KLRLGVVEKFYAAKLNVEEFSVEISGKTMNFNAEAINDLYELPNDVEMPRQEYVVSPTRKMAREALEVIVCPGAAWEITPTG-KYQLYPHQLTIEASVWL
        K+R+ VV KFY  K N  +  + I  +   FN E IN+LY  PND E   QE V   T+ +A+EAL+V+  PG   E+ P   +YQLYPH LT +A+VW+
Subjt:  KLRLGVVEKFYAAKLNVEEFSVEISGKTMNFNAEAINDLYELPNDVEMPRQEYVVSPTRKMAREALEVIVCPGAAWEITPTG-KYQLYPHQLTIEASVWL

Query:  FFIKKKIFPTHHDSTINLESTMLLCCIMTKKRVNLGDLIATSILS
        FF K KIFPT +DSTI+++ T++L CIM KK +NL ++I  +IL+
Subjt:  FFIKKKIFPTHHDSTINLESTMLLCCIMTKKRVNLGDLIATSILS

A0A5D3CVL7 Uncharacterized protein1.1e-2250Show/hide
Query:  ISGKTMNFNAEAINDLYELPNDV-EMPRQEYVVSPTRKMAREALEVIVCPGAAWEITPTGKYQLYPHQLTIEASVWLFFIKKKIFPTHHDSTINLESTML
        +  + + F  E IN+LY+LPND+   P Q  +V      A++ +++IV P A    TPT + QL+PHQLTIEA+VWLFFIKKKIFPTHHDSTI  E  ++
Subjt:  ISGKTMNFNAEAINDLYELPNDV-EMPRQEYVVSPTRKMAREALEVIVCPGAAWEITPTGKYQLYPHQLTIEASVWLFFIKKKIFPTHHDSTINLESTML

Query:  LCCIMTKKRVNLGDLIATSILS
        L CI  KK  NLG ++  + LS
Subjt:  LCCIMTKKRVNLGDLIATSILS

A0A5D3DES7 Uncharacterized protein7.0e-2245.19Show/hide
Query:  FYAAKLNVEEFSVEISGKTMNFNAEAINDLYELPNDVE-MPRQEYVVSPTRKMAREALEVIVCPGAAWEITPTGKYQLYPHQLTIEASVWLFFIKKKIFP
        FYAAK +  E  V +  K ++F  E IN+LY L ND++  P Q  +  PT+  +R  +++I   GA W  T T   QLYPHQLT EA+VWL FIKKKI P
Subjt:  FYAAKLNVEEFSVEISGKTMNFNAEAINDLYELPNDVE-MPRQEYVVSPTRKMAREALEVIVCPGAAWEITPTGKYQLYPHQLTIEASVWLFFIKKKIFP

Query:  THHDSTINLESTMLLCCIMTKKRVNLGDLIATSIL
          +DST+ +E  +LL C M K+  NLG ++  + L
Subjt:  THHDSTINLESTMLLCCIMTKKRVNLGDLIATSIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCAAAACTAAGAATCAAAATGCTCGCGAACCTGAGCGAGCAAGTGGCGGAGCTCCCCACGAAGATGAAGGCTTTGGAGCCAGAGATAGACCTCGAGGTCATCGT
TGAAGAACTCAAGGATGAGTTGGAGGCGATGAGCCCACTTGACCAAGGGCCACCGCCTAGAAAACAAAGGGAGGTCGTCGGACCATCCAAAGGAAAAAAGAAGAGTGGGA
GCTCTGGACCTGAAGAGCACCCATCAGGCGGCGAAGCCAAAACAAAAACACCCTCAATCAACTCTTTCATAAAGGCGTTTGGATGGAAGAAACTCTTCAAGGGGCACACC
AAGTTGCGACTGGGGGTGGTGGAAAAATTTTATGCGGCTAAACTCAATGTTGAGGAGTTTAGCGTTGAAATCAGTGGCAAGACGATGAACTTCAACGCAGAGGCCATCAA
CGATTTATACGAGTTGCCCAACGATGTTGAAATGCCTAGGCAAGAATACGTGGTTAGTCCCACAAGGAAAATGGCTCGTGAAGCGTTGGAAGTAATCGTTTGTCCTGGGG
CCGCATGGGAAATCACGCCGACAGGGAAGTATCAGCTTTATCCACACCAGCTAACCATAGAGGCGAGCGTGTGGCTATTCTTCATAAAAAAGAAGATCTTCCCTACGCAC
CATGATAGCACCATTAACTTAGAGTCAACGATGCTACTCTGTTGTATAATGACGAAGAAGCGCGTTAATCTCGGTGATCTGATAGCTACATCCATCCTGTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATTCAAAACTAAGAATCAAAATGCTCGCGAACCTGAGCGAGCAAGTGGCGGAGCTCCCCACGAAGATGAAGGCTTTGGAGCCAGAGATAGACCTCGAGGTCATCGT
TGAAGAACTCAAGGATGAGTTGGAGGCGATGAGCCCACTTGACCAAGGGCCACCGCCTAGAAAACAAAGGGAGGTCGTCGGACCATCCAAAGGAAAAAAGAAGAGTGGGA
GCTCTGGACCTGAAGAGCACCCATCAGGCGGCGAAGCCAAAACAAAAACACCCTCAATCAACTCTTTCATAAAGGCGTTTGGATGGAAGAAACTCTTCAAGGGGCACACC
AAGTTGCGACTGGGGGTGGTGGAAAAATTTTATGCGGCTAAACTCAATGTTGAGGAGTTTAGCGTTGAAATCAGTGGCAAGACGATGAACTTCAACGCAGAGGCCATCAA
CGATTTATACGAGTTGCCCAACGATGTTGAAATGCCTAGGCAAGAATACGTGGTTAGTCCCACAAGGAAAATGGCTCGTGAAGCGTTGGAAGTAATCGTTTGTCCTGGGG
CCGCATGGGAAATCACGCCGACAGGGAAGTATCAGCTTTATCCACACCAGCTAACCATAGAGGCGAGCGTGTGGCTATTCTTCATAAAAAAGAAGATCTTCCCTACGCAC
CATGATAGCACCATTAACTTAGAGTCAACGATGCTACTCTGTTGTATAATGACGAAGAAGCGCGTTAATCTCGGTGATCTGATAGCTACATCCATCCTGTCTTAG
Protein sequenceShow/hide protein sequence
MNSKLRIKMLANLSEQVAELPTKMKALEPEIDLEVIVEELKDELEAMSPLDQGPPPRKQREVVGPSKGKKKSGSSGPEEHPSGGEAKTKTPSINSFIKAFGWKKLFKGHT
KLRLGVVEKFYAAKLNVEEFSVEISGKTMNFNAEAINDLYELPNDVEMPRQEYVVSPTRKMAREALEVIVCPGAAWEITPTGKYQLYPHQLTIEASVWLFFIKKKIFPTH
HDSTINLESTMLLCCIMTKKRVNLGDLIATSILS