; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0017383 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017383
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr02:8682176..8684964
RNA-Seq ExpressionPI0017383
SyntenyPI0017383
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031967.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.3e-8476.19Show/hide
Query:  DRNTVDAAAGGALANKTSTEARELISRMAENSQNFGNRASELDNSLTKKVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV
        DRNTVDAAAGGALANK  TEARELISRMA+NSQ FGNRASEL+NSLTK+VSELKSQMLNMTTLLTSFVQG  +K+ KC VCGLVGHPNDKCP+++EE N+
Subjt:  DRNTVDAAAGGALANKTSTEARELISRMAENSQNFGNRASELDNSLTKKVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNGGWRDNPNLRWGNDNQRPSQATSSSNNQGTNFEVLVKALTTNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSAISLRRGK
        ++KYDP+SNTYN GWRDNP LRWGNDNQ+ +QA ++S+NQ TN + ++KAL TNT+SFQ EMKQQM+ LT  ISK++GKGKLPAQP+HANVS ISLR GK
Subjt:  IRKYDPHSNTYNGGWRDNPNLRWGNDNQRPSQATSSSNNQGTNFEVLVKALTTNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSAISLRRGK

Query:  ILETPSSEEK
        IL+TPS++EK
Subjt:  ILETPSSEEK

KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.0e-8576.19Show/hide
Query:  DRNTVDAAAGGALANKTSTEARELISRMAENSQNFGNRASELDNSLTKKVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV
        DRNTVDA AGGALA+K  TEARELIS+MAENSQ+F NRASELDNSLTK+VSELKSQMLNMTTLLTSFVQG  +K+ KCGVCGLVGHPNDKCP+++E+ N+
Subjt:  DRNTVDAAAGGALANKTSTEARELISRMAENSQNFGNRASELDNSLTKKVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNGGWRDNPNLRWGNDNQRPSQATSSSNNQGTNFEVLVKALTTNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSAISLRRGK
        +RKYDPH NTYN GWRDNPNLRWGNDNQ+ +QA S+S+NQGTN E ++KAL TNT+SFQ EMKQQM+ LT AISK++GKGKL AQ ++ANVSA+SLR GK
Subjt:  IRKYDPHSNTYNGGWRDNPNLRWGNDNQRPSQATSSSNNQGTNFEVLVKALTTNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSAISLRRGK

Query:  ILETPSSEEK
        IL+TP+++EK
Subjt:  ILETPSSEEK

KAA0061138.1 retrotransposon gag protein [Cucumis melo var. makuwa]8.2e-8777.62Show/hide
Query:  DRNTVDAAAGGALANKTSTEARELISRMAENSQNFGNRASELDNSLTKKVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV
        DRNT+D  AGGALA+KT TEARELISRM ENSQ+FGNRASELDNSLTK+VSELKSQMLNMTTLLTSFVQG   K+ KCGVCGLVGHPNDKC  ++E+ N+
Subjt:  DRNTVDAAAGGALANKTSTEARELISRMAENSQNFGNRASELDNSLTKKVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNGGWRDNPNLRWGNDNQRPSQATSSSNNQGTNFEVLVKALTTNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSAISLRRGK
        +R+YDPHSNTYN GWRDNPNLRWGNDNQ+ +QA S+S+NQGTN E ++KAL TNT+SFQ EMKQQM+ LT AISK++GKGKLPAQPD+ANVSAISLR GK
Subjt:  IRKYDPHSNTYNGGWRDNPNLRWGNDNQRPSQATSSSNNQGTNFEVLVKALTTNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSAISLRRGK

Query:  ILETPSSEEK
        IL+TP+++EK
Subjt:  ILETPSSEEK

TYK07549.1 retrotransposon gag protein [Cucumis melo var. makuwa]8.2e-8777.99Show/hide
Query:  RNTVDAAAGGALANKTSTEARELISRMAENSQNFGNRASELDNSLTKKVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANVI
        RNT+D AAGGALA+KT TEARELISRMAENS++FGNRASELDNSLTK+VSELKSQMLNMTTLLTSFVQG   K+ KCGVCGLVGHPNDKCP ++E+ N++
Subjt:  RNTVDAAAGGALANKTSTEARELISRMAENSQNFGNRASELDNSLTKKVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANVI

Query:  RKYDPHSNTYNGGWRDNPNLRWGNDNQRPSQATSSSNNQGTNFEVLVKALTTNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSAISLRRGKI
        R+YDPHSNTYN GWRDN NLRWGNDNQ+ +QA S+S+NQGTN E ++KAL TNT+SFQ +MKQQM+ LT AISK++GKGKLPAQPDHANVSAISLR GKI
Subjt:  RKYDPHSNTYNGGWRDNPNLRWGNDNQRPSQATSSSNNQGTNFEVLVKALTTNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSAISLRRGKI

Query:  LETPSSEEK
        L+TP+++EK
Subjt:  LETPSSEEK

TYK10613.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.1e-8375.71Show/hide
Query:  DRNTVDAAAGGALANKTSTEARELISRMAENSQNFGNRASELDNSLTKKVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV
        DRNTVDA AG ALA+KT TEA ELISRMAEN Q+FGNRAS+L+N LTK+VSELKS+MLNMTTLLTSFVQG   K+ KCGVCGLVGHPNDKCP+++E+ N+
Subjt:  DRNTVDAAAGGALANKTSTEARELISRMAENSQNFGNRASELDNSLTKKVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNGGWRDNPNLRWGNDNQRPSQATSSSNNQGTNFEVLVKALTTNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSAISLRRGK
        +R+YDPH NTYN GWRD PNLRWGND Q  +QA S+S+NQGTN E ++KALTTNT+SFQ EMKQQM+ LT AISK++GKGKLPAQPDHANVSAISLR GK
Subjt:  IRKYDPHSNTYNGGWRDNPNLRWGNDNQRPSQATSSSNNQGTNFEVLVKALTTNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSAISLRRGK

Query:  ILETPSSEEK
        IL+TP+++EK
Subjt:  ILETPSSEEK

TrEMBL top hitse value%identityAlignment
A0A5A7SRF5 Retrotransposon gag protein6.4e-8576.19Show/hide
Query:  DRNTVDAAAGGALANKTSTEARELISRMAENSQNFGNRASELDNSLTKKVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV
        DRNTVDAAAGGALANK  TEARELISRMA+NSQ FGNRASEL+NSLTK+VSELKSQMLNMTTLLTSFVQG  +K+ KC VCGLVGHPNDKCP+++EE N+
Subjt:  DRNTVDAAAGGALANKTSTEARELISRMAENSQNFGNRASELDNSLTKKVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNGGWRDNPNLRWGNDNQRPSQATSSSNNQGTNFEVLVKALTTNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSAISLRRGK
        ++KYDP+SNTYN GWRDNP LRWGNDNQ+ +QA ++S+NQ TN + ++KAL TNT+SFQ EMKQQM+ LT  ISK++GKGKLPAQP+HANVS ISLR GK
Subjt:  IRKYDPHSNTYNGGWRDNPNLRWGNDNQRPSQATSSSNNQGTNFEVLVKALTTNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSAISLRRGK

Query:  ILETPSSEEK
        IL+TPS++EK
Subjt:  ILETPSSEEK

A0A5A7V0Q7 Retrotransposon gag protein4.0e-8777.62Show/hide
Query:  DRNTVDAAAGGALANKTSTEARELISRMAENSQNFGNRASELDNSLTKKVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV
        DRNT+D  AGGALA+KT TEARELISRM ENSQ+FGNRASELDNSLTK+VSELKSQMLNMTTLLTSFVQG   K+ KCGVCGLVGHPNDKC  ++E+ N+
Subjt:  DRNTVDAAAGGALANKTSTEARELISRMAENSQNFGNRASELDNSLTKKVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNGGWRDNPNLRWGNDNQRPSQATSSSNNQGTNFEVLVKALTTNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSAISLRRGK
        +R+YDPHSNTYN GWRDNPNLRWGNDNQ+ +QA S+S+NQGTN E ++KAL TNT+SFQ EMKQQM+ LT AISK++GKGKLPAQPD+ANVSAISLR GK
Subjt:  IRKYDPHSNTYNGGWRDNPNLRWGNDNQRPSQATSSSNNQGTNFEVLVKALTTNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSAISLRRGK

Query:  ILETPSSEEK
        IL+TP+++EK
Subjt:  ILETPSSEEK

A0A5D3CB46 Retrotransposon gag protein4.0e-8777.99Show/hide
Query:  RNTVDAAAGGALANKTSTEARELISRMAENSQNFGNRASELDNSLTKKVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANVI
        RNT+D AAGGALA+KT TEARELISRMAENS++FGNRASELDNSLTK+VSELKSQMLNMTTLLTSFVQG   K+ KCGVCGLVGHPNDKCP ++E+ N++
Subjt:  RNTVDAAAGGALANKTSTEARELISRMAENSQNFGNRASELDNSLTKKVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANVI

Query:  RKYDPHSNTYNGGWRDNPNLRWGNDNQRPSQATSSSNNQGTNFEVLVKALTTNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSAISLRRGKI
        R+YDPHSNTYN GWRDN NLRWGNDNQ+ +QA S+S+NQGTN E ++KAL TNT+SFQ +MKQQM+ LT AISK++GKGKLPAQPDHANVSAISLR GKI
Subjt:  RKYDPHSNTYNGGWRDNPNLRWGNDNQRPSQATSSSNNQGTNFEVLVKALTTNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSAISLRRGKI

Query:  LETPSSEEK
        L+TP+++EK
Subjt:  LETPSSEEK

A0A5D3CFE7 Retrotransposon gag protein5.4e-8475.71Show/hide
Query:  DRNTVDAAAGGALANKTSTEARELISRMAENSQNFGNRASELDNSLTKKVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV
        DRNTVDA AG ALA+KT TEA ELISRMAEN Q+FGNRAS+L+N LTK+VSELKS+MLNMTTLLTSFVQG   K+ KCGVCGLVGHPNDKCP+++E+ N+
Subjt:  DRNTVDAAAGGALANKTSTEARELISRMAENSQNFGNRASELDNSLTKKVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNGGWRDNPNLRWGNDNQRPSQATSSSNNQGTNFEVLVKALTTNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSAISLRRGK
        +R+YDPH NTYN GWRD PNLRWGND Q  +QA S+S+NQGTN E ++KALTTNT+SFQ EMKQQM+ LT AISK++GKGKLPAQPDHANVSAISLR GK
Subjt:  IRKYDPHSNTYNGGWRDNPNLRWGNDNQRPSQATSSSNNQGTNFEVLVKALTTNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSAISLRRGK

Query:  ILETPSSEEK
        IL+TP+++EK
Subjt:  ILETPSSEEK

A0A5D3CRR8 Retrotransposon gag protein9.8e-8676.19Show/hide
Query:  DRNTVDAAAGGALANKTSTEARELISRMAENSQNFGNRASELDNSLTKKVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV
        DRNTVDA AGGALA+K  TEARELIS+MAENSQ+F NRASELDNSLTK+VSELKSQMLNMTTLLTSFVQG  +K+ KCGVCGLVGHPNDKCP+++E+ N+
Subjt:  DRNTVDAAAGGALANKTSTEARELISRMAENSQNFGNRASELDNSLTKKVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANV

Query:  IRKYDPHSNTYNGGWRDNPNLRWGNDNQRPSQATSSSNNQGTNFEVLVKALTTNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSAISLRRGK
        +RKYDPH NTYN GWRDNPNLRWGNDNQ+ +QA S+S+NQGTN E ++KAL TNT+SFQ EMKQQM+ LT AISK++GKGKL AQ ++ANVSA+SLR GK
Subjt:  IRKYDPHSNTYNGGWRDNPNLRWGNDNQRPSQATSSSNNQGTNFEVLVKALTTNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSAISLRRGK

Query:  ILETPSSEEK
        IL+TP+++EK
Subjt:  ILETPSSEEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGAAATACAGTAGATGCTGCAGCAGGTGGTGCTTTGGCTAACAAAACCTCTACTGAGGCTAGAGAGCTCATTTCAAGGATGGCTGAAAATTCACAGAATTTTGG
CAACAGAGCATCCGAGCTCGACAATTCATTGACAAAGAAGGTAAGTGAACTAAAATCACAAATGCTTAATATGACTACTTTACTAACTTCCTTTGTGCAAGGTGGATCTG
TAAAAATTGCAAAATGTGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAATGTCCTGACCTTGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATAGCAAT
ACATACAATGGCGGTTGGAGAGACAACCCTAACCTTAGATGGGGAAACGACAACCAAAGACCCTCGCAAGCAACCTCCTCTTCAAACAATCAAGGTACTAATTTTGAAGT
TTTAGTTAAAGCTCTTACTACTAATACTATCTCTTTTCAGAATGAAATGAAGCAACAAATGTCTCATCTAACAAATGCCATAAGCAAACTAGAAGGTAAAGGCAAACTTC
CAGCTCAGCCTGATCATGCCAACGTAAGTGCCATCTCGCTTAGAAGAGGTAAGATTCTGGAAACCCCTTCAAGCGAAGAAAAGGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATAGAAATACAGTAGATGCTGCAGCAGGTGGTGCTTTGGCTAACAAAACCTCTACTGAGGCTAGAGAGCTCATTTCAAGGATGGCTGAAAATTCACAGAATTTTGG
CAACAGAGCATCCGAGCTCGACAATTCATTGACAAAGAAGGTAAGTGAACTAAAATCACAAATGCTTAATATGACTACTTTACTAACTTCCTTTGTGCAAGGTGGATCTG
TAAAAATTGCAAAATGTGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAATGTCCTGACCTTGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATAGCAAT
ACATACAATGGCGGTTGGAGAGACAACCCTAACCTTAGATGGGGAAACGACAACCAAAGACCCTCGCAAGCAACCTCCTCTTCAAACAATCAAGGTACTAATTTTGAAGT
TTTAGTTAAAGCTCTTACTACTAATACTATCTCTTTTCAGAATGAAATGAAGCAACAAATGTCTCATCTAACAAATGCCATAAGCAAACTAGAAGGTAAAGGCAAACTTC
CAGCTCAGCCTGATCATGCCAACGTAAGTGCCATCTCGCTTAGAAGAGGTAAGATTCTGGAAACCCCTTCAAGCGAAGAAAAGGTATAG
Protein sequenceShow/hide protein sequence
MDRNTVDAAAGGALANKTSTEARELISRMAENSQNFGNRASELDNSLTKKVSELKSQMLNMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSN
TYNGGWRDNPNLRWGNDNQRPSQATSSSNNQGTNFEVLVKALTTNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSAISLRRGKILETPSSEEKV