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PI0017384 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017384
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr02:15465170..15465889
RNA-Seq ExpressionPI0017384
SyntenyPI0017384
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046798.1 DNA-binding protein HEXBP-like [Cucumis melo var. makuwa]7.0e-0647.47Show/hide
Query:  MEECSS-PTQNASQTVKDAYDRWTKAMTR-----LAS-----TSWPSLMKNEGQKEGETNIAHSRRFQKDSSSRTKSTPSFSRTKKIQKKKGEKGKCDT
        MEEC   PTQNASQ+VK AYD WTKA  +     LAS     +    +M  +GQKEGE N+ HS              PS S +KKIQK+KG KGK  T
Subjt:  MEECSS-PTQNASQTVKDAYDRWTKAMTR-----LAS-----TSWPSLMKNEGQKEGETNIAHSRRFQKDSSSRTKSTPSFSRTKKIQKKKGEKGKCDT

KAA0047360.1 gag/pol protein [Cucumis melo var. makuwa]4.8e-0758.21Show/hide
Query:  AMTRLASTSWPS---LMKNEGQKEGETNIAHSRRFQKDSSSRTKSTPSFSRTKKIQKKKGEKGKCDT
        A  R A   WP+   +   +GQKEG+ N+AHS+RFQK SSSRTK TPSFS +KKIQKKK  KG   T
Subjt:  AMTRLASTSWPS---LMKNEGQKEGETNIAHSRRFQKDSSSRTKSTPSFSRTKKIQKKKGEKGKCDT

KAA0050563.1 DNA-binding protein HEXBP-like [Cucumis melo var. makuwa]3.5e-0570.83Show/hide
Query:  EGQKEGETNIAHSRRFQKDSSSRTKSTPSFSRTKKIQKKKGEKGKCDT
        +GQKE E +I HSRRFQK SSSRTK  PS S +KKIQKKKG KGK  T
Subjt:  EGQKEGETNIAHSRRFQKDSSSRTKSTPSFSRTKKIQKKKGEKGKCDT

TYK00098.1 gag/pol protein [Cucumis melo var. makuwa]4.5e-0571.11Show/hide
Query:  EGQKEGETNIAHSRRFQKDSSSRTKSTPSFSRTKKIQKKKGEKGK
        +GQ EGE ++AHS+RFQK SSS TKS PSFS  KKI KKKG KGK
Subjt:  EGQKEGETNIAHSRRFQKDSSSRTKSTPSFSRTKKIQKKKGEKGK

TYK05724.1 gag/pol protein [Cucumis melo var. makuwa]1.7e-0777.78Show/hide
Query:  GQKEGETNIAHSRRFQKDSSSRTKSTPSFSRTKKIQKKKGEKGKC
        GQKE E N++HS+RFQK SSS TKS PS SR KKIQKKKGEKGKC
Subjt:  GQKEGETNIAHSRRFQKDSSSRTKSTPSFSRTKKIQKKKGEKGKC

TrEMBL top hitse value%identityAlignment
A0A5A7TVA1 DNA-binding protein HEXBP-like3.4e-0647.47Show/hide
Query:  MEECSS-PTQNASQTVKDAYDRWTKAMTR-----LAS-----TSWPSLMKNEGQKEGETNIAHSRRFQKDSSSRTKSTPSFSRTKKIQKKKGEKGKCDT
        MEEC   PTQNASQ+VK AYD WTKA  +     LAS     +    +M  +GQKEGE N+ HS              PS S +KKIQK+KG KGK  T
Subjt:  MEECSS-PTQNASQTVKDAYDRWTKAMTR-----LAS-----TSWPSLMKNEGQKEGETNIAHSRRFQKDSSSRTKSTPSFSRTKKIQKKKGEKGKCDT

A0A5A7TW30 Gag/pol protein2.3e-0758.21Show/hide
Query:  AMTRLASTSWPS---LMKNEGQKEGETNIAHSRRFQKDSSSRTKSTPSFSRTKKIQKKKGEKGKCDT
        A  R A   WP+   +   +GQKEG+ N+AHS+RFQK SSSRTK TPSFS +KKIQKKK  KG   T
Subjt:  AMTRLASTSWPS---LMKNEGQKEGETNIAHSRRFQKDSSSRTKSTPSFSRTKKIQKKKGEKGKCDT

A0A5A7U3W2 DNA-binding protein HEXBP-like1.7e-0570.83Show/hide
Query:  EGQKEGETNIAHSRRFQKDSSSRTKSTPSFSRTKKIQKKKGEKGKCDT
        +GQKE E +I HSRRFQK SSSRTK  PS S +KKIQKKKG KGK  T
Subjt:  EGQKEGETNIAHSRRFQKDSSSRTKSTPSFSRTKKIQKKKGEKGKCDT

A0A5D3BLV4 Gag/pol protein2.2e-0571.11Show/hide
Query:  EGQKEGETNIAHSRRFQKDSSSRTKSTPSFSRTKKIQKKKGEKGK
        +GQ EGE ++AHS+RFQK SSS TKS PSFS  KKI KKKG KGK
Subjt:  EGQKEGETNIAHSRRFQKDSSSRTKSTPSFSRTKKIQKKKGEKGK

A0A5D3C343 Gag/pol protein8.1e-0877.78Show/hide
Query:  GQKEGETNIAHSRRFQKDSSSRTKSTPSFSRTKKIQKKKGEKGKC
        GQKE E N++HS+RFQK SSS TKS PS SR KKIQKKKGEKGKC
Subjt:  GQKEGETNIAHSRRFQKDSSSRTKSTPSFSRTKKIQKKKGEKGKC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAATGTTCTTCCCCTACTCAAAATGCATCCCAGACTGTCAAGGATGCATATGACCGTTGGACAAAGGCAATGACAAGGCTTGCATCTACATCTTGGCCATCTCT
TATGAAAAATGAGGGACAGAAAGAAGGAGAAACAAATATTGCCCATTCTAGAAGGTTTCAGAAGGATTCATCCTCTAGAACCAAGTCTACACCTTCATTTTCTAGGACTA
AGAAAATCCAGAAGAAGAAAGGAGAGAAAGGGAAGTGTGACACCTGGTCCTGCAACACATCTTCCTCATGCGTTATAGTAAGAAGACGCAACTTGGACAACCTTGATGCT
TCTAAACGAAAGGCCAGAACGTCTGGTCTAAAAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAATGTTCTTCCCCTACTCAAAATGCATCCCAGACTGTCAAGGATGCATATGACCGTTGGACAAAGGCAATGACAAGGCTTGCATCTACATCTTGGCCATCTCT
TATGAAAAATGAGGGACAGAAAGAAGGAGAAACAAATATTGCCCATTCTAGAAGGTTTCAGAAGGATTCATCCTCTAGAACCAAGTCTACACCTTCATTTTCTAGGACTA
AGAAAATCCAGAAGAAGAAAGGAGAGAAAGGGAAGTGTGACACCTGGTCCTGCAACACATCTTCCTCATGCGTTATAGTAAGAAGACGCAACTTGGACAACCTTGATGCT
TCTAAACGAAAGGCCAGAACGTCTGGTCTAAAAATTTAA
Protein sequenceShow/hide protein sequence
MEECSSPTQNASQTVKDAYDRWTKAMTRLASTSWPSLMKNEGQKEGETNIAHSRRFQKDSSSRTKSTPSFSRTKKIQKKKGEKGKCDTWSCNTSSSCVIVRRRNLDNLDA
SKRKARTSGLKI