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PI0017387 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017387
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPolynucleotide adenylyltransferase
Genome locationchr03:3303027..3303303
RNA-Seq ExpressionPI0017387
SyntenyPI0017387
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0031123 - RNA 3'-end processing (biological process)
GO:0043631 - RNA polyadenylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004652 - polynucleotide adenylyltransferase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065055.1 nuclear poly(A) polymerase 4 isoform X3 [Cucumis melo var. makuwa]4.6e-1186.05Show/hide
Query:  CLAFEPSQCPIFRRWEIPCEGTARVFVSEANAIYASKTLNLAV
        CLAFEPSQ PIFRRWEI CEGTARV VS ANAIY SKT NLAV
Subjt:  CLAFEPSQCPIFRRWEIPCEGTARVFVSEANAIYASKTLNLAV
KGN62795.1 hypothetical protein Csa_022232 [Cucumis sativus]1.1e-2870.33Show/hide
Query:  MAWWHGIWFSSNMLFIVLDHGNPKHHCWGKNLKEV-------------CLAFEPSQCPIFRRWEIPCEGTARVFVSEANAIYASKTLNLAV
        MAWWHGIWFSSNMLFIVLDHGNPK  CWGKNLK+              CLA EPSQ PIFRRWEI CEGTA   VS  NAIY SKT NLAV
Subjt:  MAWWHGIWFSSNMLFIVLDHGNPKHHCWGKNLKEV-------------CLAFEPSQCPIFRRWEIPCEGTARVFVSEANAIYASKTLNLAV
TrEMBL top hitse value%identityAlignment
A0A0A0LLH3 Uncharacterized protein5.3e-2970.33Show/hide
Query:  MAWWHGIWFSSNMLFIVLDHGNPKHHCWGKNLKEV-------------CLAFEPSQCPIFRRWEIPCEGTARVFVSEANAIYASKTLNLAV
        MAWWHGIWFSSNMLFIVLDHGNPK  CWGKNLK+              CLA EPSQ PIFRRWEI CEGTA   VS  NAIY SKT NLAV
Subjt:  MAWWHGIWFSSNMLFIVLDHGNPKHHCWGKNLKEV-------------CLAFEPSQCPIFRRWEIPCEGTARVFVSEANAIYASKTLNLAV
A0A5A7VGN2 Polynucleotide adenylyltransferase2.2e-1186.05Show/hide
Query:  CLAFEPSQCPIFRRWEIPCEGTARVFVSEANAIYASKTLNLAV
        CLAFEPSQ PIFRRWEI CEGTARV VS ANAIY SKT NLAV
Subjt:  CLAFEPSQCPIFRRWEIPCEGTARVFVSEANAIYASKTLNLAV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGGTGGCATGGCATATGGTTCAGCTCCAATATGCTGTTTATTGTCCTTGATCATGGGAATCCGAAGCATCACTGTTGGGGAAAAAACCTTAAAGAAGTATGCCT
GGCGTTCGAACCATCACAGTGTCCCATTTTTAGAAGATGGGAGATTCCTTGTGAAGGAACTGCTCGTGTGTTCGTTTCTGAGGCGAATGCAATCTACGCTTCCAAGACCT
TAAATCTTGCAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGGTGGCATGGCATATGGTTCAGCTCCAATATGCTGTTTATTGTCCTTGATCATGGGAATCCGAAGCATCACTGTTGGGGAAAAAACCTTAAAGAAGTATGCCT
GGCGTTCGAACCATCACAGTGTCCCATTTTTAGAAGATGGGAGATTCCTTGTGAAGGAACTGCTCGTGTGTTCGTTTCTGAGGCGAATGCAATCTACGCTTCCAAGACCT
TAAATCTTGCAGTTTGA
Protein sequenceShow/hide protein sequence
MAWWHGIWFSSNMLFIVLDHGNPKHHCWGKNLKEVCLAFEPSQCPIFRRWEIPCEGTARVFVSEANAIYASKTLNLAV