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PI0017388 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017388
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr03:15924537..15924746
RNA-Seq ExpressionPI0017388
SyntenyPI0017388
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031555.1 retrotransposon protein [Cucumis melo var. makuwa]3.6e-2372.46Show/hide
Query:  MASSSRAPKHTWTREEESTLVECLVELVSMKGWKSDNGTFRPSYLAMIMRIMSEKLPGCTIQGTTTIDC
        M++S+RAP+H WTREEE TLVECL+ELVSM GWKSDNGTFRP YLA ++R+M+EKLPGC ++ TT IDC
Subjt:  MASSSRAPKHTWTREEESTLVECLVELVSMKGWKSDNGTFRPSYLAMIMRIMSEKLPGCTIQGTTTIDC

KAA0038975.1 retrotransposon protein [Cucumis melo var. makuwa]3.6e-2372.46Show/hide
Query:  MASSSRAPKHTWTREEESTLVECLVELVSMKGWKSDNGTFRPSYLAMIMRIMSEKLPGCTIQGTTTIDC
        M++S+RAP+H WTREEE TLVECL+ELVSM GWKSDNGTFRP YLA ++R+M+EKLPGC ++ TT IDC
Subjt:  MASSSRAPKHTWTREEESTLVECLVELVSMKGWKSDNGTFRPSYLAMIMRIMSEKLPGCTIQGTTTIDC

KAA0041588.1 retrotransposon protein [Cucumis melo var. makuwa]3.6e-2372.46Show/hide
Query:  MASSSRAPKHTWTREEESTLVECLVELVSMKGWKSDNGTFRPSYLAMIMRIMSEKLPGCTIQGTTTIDC
        M++S+RAP+H WTREEE TLVECL+ELVSM GWKSDNGTFRP YLA ++R+M+EKLPGC ++ TT IDC
Subjt:  MASSSRAPKHTWTREEESTLVECLVELVSMKGWKSDNGTFRPSYLAMIMRIMSEKLPGCTIQGTTTIDC

KAA0046637.1 retrotransposon protein [Cucumis melo var. makuwa]3.6e-2372.46Show/hide
Query:  MASSSRAPKHTWTREEESTLVECLVELVSMKGWKSDNGTFRPSYLAMIMRIMSEKLPGCTIQGTTTIDC
        M++S+RAP+H WTREEE TLVECL+ELVSM GWKSDNGTFRP YLA ++R+M+EKLPGC ++ TT IDC
Subjt:  MASSSRAPKHTWTREEESTLVECLVELVSMKGWKSDNGTFRPSYLAMIMRIMSEKLPGCTIQGTTTIDC

TYJ96194.1 retrotransposon protein [Cucumis melo var. makuwa]3.6e-2372.46Show/hide
Query:  MASSSRAPKHTWTREEESTLVECLVELVSMKGWKSDNGTFRPSYLAMIMRIMSEKLPGCTIQGTTTIDC
        M++S+RAP+H WTREEE TLVECL+ELVSM GWKSDNGTFRP YLA ++R+M+EKLPGC ++ TT IDC
Subjt:  MASSSRAPKHTWTREEESTLVECLVELVSMKGWKSDNGTFRPSYLAMIMRIMSEKLPGCTIQGTTTIDC

TrEMBL top hitse value%identityAlignment
A0A5A7TRV1 Retrotransposon protein1.7e-2372.46Show/hide
Query:  MASSSRAPKHTWTREEESTLVECLVELVSMKGWKSDNGTFRPSYLAMIMRIMSEKLPGCTIQGTTTIDC
        M++S+RAP+H WTREEE TLVECL+ELVSM GWKSDNGTFRP YLA ++R+M+EKLPGC ++ TT IDC
Subjt:  MASSSRAPKHTWTREEESTLVECLVELVSMKGWKSDNGTFRPSYLAMIMRIMSEKLPGCTIQGTTTIDC

A0A5A7TXW8 Retrotransposon protein1.7e-2372.46Show/hide
Query:  MASSSRAPKHTWTREEESTLVECLVELVSMKGWKSDNGTFRPSYLAMIMRIMSEKLPGCTIQGTTTIDC
        M++S+RAP+H WTREEE TLVECL+ELVSM GWKSDNGTFRP YLA ++R+M+EKLPGC ++ TT IDC
Subjt:  MASSSRAPKHTWTREEESTLVECLVELVSMKGWKSDNGTFRPSYLAMIMRIMSEKLPGCTIQGTTTIDC

A0A5D3BCN9 Retrotransposon protein1.7e-2372.46Show/hide
Query:  MASSSRAPKHTWTREEESTLVECLVELVSMKGWKSDNGTFRPSYLAMIMRIMSEKLPGCTIQGTTTIDC
        M++S+RAP+H WTREEE TLVECL+ELVSM GWKSDNGTFRP YLA ++R+M+EKLPGC ++ TT IDC
Subjt:  MASSSRAPKHTWTREEESTLVECLVELVSMKGWKSDNGTFRPSYLAMIMRIMSEKLPGCTIQGTTTIDC

A0A5D3CWL2 Retrotransposon protein1.7e-2372.46Show/hide
Query:  MASSSRAPKHTWTREEESTLVECLVELVSMKGWKSDNGTFRPSYLAMIMRIMSEKLPGCTIQGTTTIDC
        M++S+RAP+H WTREEE TLVECL+ELVSM GWKSDNGTFRP YLA ++R+M+EKLPGC ++ TT IDC
Subjt:  MASSSRAPKHTWTREEESTLVECLVELVSMKGWKSDNGTFRPSYLAMIMRIMSEKLPGCTIQGTTTIDC

A0A5D3DCZ1 Retrotransposon protein1.7e-2372.46Show/hide
Query:  MASSSRAPKHTWTREEESTLVECLVELVSMKGWKSDNGTFRPSYLAMIMRIMSEKLPGCTIQGTTTIDC
        M++S+RAP+H WTREEE TLVECL+ELVSM GWKSDNGTFRP YLA ++R+M+EKLPGC ++ TT IDC
Subjt:  MASSSRAPKHTWTREEESTLVECLVELVSMKGWKSDNGTFRPSYLAMIMRIMSEKLPGCTIQGTTTIDC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTTCGTCGAGGGCCCCCAAGCATACGTGGACCAGAGAAGAAGAGTCAACCCTCGTGGAATGTCTGGTGGAGTTGGTATCCATGAAGGGGTGGAAATCGGACAA
CGGCACATTTCGACCCAGTTACTTGGCAATGATTATGCGAATTATGTCGGAAAAGCTCCCAGGGTGTACCATACAGGGGACTACGACTATTGACTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTTCGTCGAGGGCCCCCAAGCATACGTGGACCAGAGAAGAAGAGTCAACCCTCGTGGAATGTCTGGTGGAGTTGGTATCCATGAAGGGGTGGAAATCGGACAA
CGGCACATTTCGACCCAGTTACTTGGCAATGATTATGCGAATTATGTCGGAAAAGCTCCCAGGGTGTACCATACAGGGGACTACGACTATTGACTGTTGA
Protein sequenceShow/hide protein sequence
MASSSRAPKHTWTREEESTLVECLVELVSMKGWKSDNGTFRPSYLAMIMRIMSEKLPGCTIQGTTTIDC