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PI0017414 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017414
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr03:22158396..22158775
RNA-Seq ExpressionPI0017414
SyntenyPI0017414
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052859.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]6.4e-3372.32Show/hide
Query:  MKINESERVSDYFTRVQTVVNQLKRNGETLTNARVVEKILRSLTNDFQNVVCAMEESKNLEKMTIDELA--------EKKTTRSHRGGLTNKDDHQRRQG
        MKI ESE VSDY T+VQTVVNQLKRNG+T  + R+VEKILRSLTNDF+NVVCA+E+ KNLE+MTI EL          KK TR  RGGLTNKDDHQRRQG
Subjt:  MKINESERVSDYFTRVQTVVNQLKRNGETLTNARVVEKILRSLTNDFQNVVCAMEESKNLEKMTIDELA--------EKKTTRSHRGGLTNKDDHQRRQG

Query:  NVCITQSRKRTW
        NVC TQSRK+TW
Subjt:  NVCITQSRKRTW

KAA0060771.1 polyprotein [Cucumis melo var. makuwa]1.4e-2465.09Show/hide
Query:  SDYFTRVQTVVNQLKRNGETLTNARVVEKILRSLTNDFQNVVCAMEESKNLEKMTI-----------DELAEKKTTRSHRGGLTNKDDHQRRQGNVCITQ
        +D   + Q VVNQLK NG+TL +ARVVEKI  SLTNDF+NVVCA EESKNLE+MT             E  EKKTTR    G+TNKDDHQRRQGNVC TQ
Subjt:  SDYFTRVQTVVNQLKRNGETLTNARVVEKILRSLTNDFQNVVCAMEESKNLEKMTI-----------DELAEKKTTRSHRGGLTNKDDHQRRQGNVCITQ

Query:  SRKRTW
        SRKRTW
Subjt:  SRKRTW

KYP38589.1 hypothetical protein KK1_040157 [Cajanus cajan]4.4e-1875.36Show/hide
Query:  MKINESERVSDYFTRVQTVVNQLKRNGETLTNARVVEKILRSLTNDFQNVVCAMEESKNLEKMTIDELA
        MK+ ESE VSDY TRVQTVVNQL +NGETLT+ RVVEKILRSLT+ F+NVVCA+EESK+L  +T+DELA
Subjt:  MKINESERVSDYFTRVQTVVNQLKRNGETLTNARVVEKILRSLTNDFQNVVCAMEESKNLEKMTIDELA

PKU61774.1 hypothetical protein MA16_Dca028474 [Dendrobium catenatum]5.2e-1978.26Show/hide
Query:  MKINESERVSDYFTRVQTVVNQLKRNGETLTNARVVEKILRSLTNDFQNVVCAMEESKNLEKMTIDELA
        MK+ ESE VSDY TRVQTVVNQLKRNGE LT+ARVVEKILRSLTN+F+NVVCA+EESK+L  +T++ELA
Subjt:  MKINESERVSDYFTRVQTVVNQLKRNGETLTNARVVEKILRSLTNDFQNVVCAMEESKNLEKMTIDELA

XP_038878101.1 uncharacterized protein LOC120070273 isoform X4 [Benincasa hispida]1.2e-2082.61Show/hide
Query:  MKINESERVSDYFTRVQTVVNQLKRNGETLTNARVVEKILRSLTNDFQNVVCAMEESKNLEKMTIDELA
        MK+ ESERVS Y TRVQTVVNQLKRNGETL +A+VVEKILRSLTNDF+NVVCA+EESK LE+MTID+LA
Subjt:  MKINESERVSDYFTRVQTVVNQLKRNGETLTNARVVEKILRSLTNDFQNVVCAMEESKNLEKMTIDELA

TrEMBL top hitse value%identityAlignment
A0A151R7V8 Uncharacterized protein2.2e-1875.36Show/hide
Query:  MKINESERVSDYFTRVQTVVNQLKRNGETLTNARVVEKILRSLTNDFQNVVCAMEESKNLEKMTIDELA
        MK+ ESE VSDY TRVQTVVNQL +NGETLT+ RVVEKILRSLT+ F+NVVCA+EESK+L  +T+DELA
Subjt:  MKINESERVSDYFTRVQTVVNQLKRNGETLTNARVVEKILRSLTNDFQNVVCAMEESKNLEKMTIDELA

A0A2I0VED6 Uncharacterized protein2.5e-1978.26Show/hide
Query:  MKINESERVSDYFTRVQTVVNQLKRNGETLTNARVVEKILRSLTNDFQNVVCAMEESKNLEKMTIDELA
        MK+ ESE VSDY TRVQTVVNQLKRNGE LT+ARVVEKILRSLTN+F+NVVCA+EESK+L  +T++ELA
Subjt:  MKINESERVSDYFTRVQTVVNQLKRNGETLTNARVVEKILRSLTNDFQNVVCAMEESKNLEKMTIDELA

A0A5D3C1S7 Retrovirus-related Pol polyprotein from transposon TNT 1-943.1e-3372.32Show/hide
Query:  MKINESERVSDYFTRVQTVVNQLKRNGETLTNARVVEKILRSLTNDFQNVVCAMEESKNLEKMTIDELA--------EKKTTRSHRGGLTNKDDHQRRQG
        MKI ESE VSDY T+VQTVVNQLKRNG+T  + R+VEKILRSLTNDF+NVVCA+E+ KNLE+MTI EL          KK TR  RGGLTNKDDHQRRQG
Subjt:  MKINESERVSDYFTRVQTVVNQLKRNGETLTNARVVEKILRSLTNDFQNVVCAMEESKNLEKMTIDELA--------EKKTTRSHRGGLTNKDDHQRRQG

Query:  NVCITQSRKRTW
        NVC TQSRK+TW
Subjt:  NVCITQSRKRTW

A0A5D3CND8 Polyprotein6.9e-2565.09Show/hide
Query:  SDYFTRVQTVVNQLKRNGETLTNARVVEKILRSLTNDFQNVVCAMEESKNLEKMTI-----------DELAEKKTTRSHRGGLTNKDDHQRRQGNVCITQ
        +D   + Q VVNQLK NG+TL +ARVVEKI  SLTNDF+NVVCA EESKNLE+MT             E  EKKTTR    G+TNKDDHQRRQGNVC TQ
Subjt:  SDYFTRVQTVVNQLKRNGETLTNARVVEKILRSLTNDFQNVVCAMEESKNLEKMTI-----------DELAEKKTTRSHRGGLTNKDDHQRRQGNVCITQ

Query:  SRKRTW
        SRKRTW
Subjt:  SRKRTW

A0A6A2XY19 Integrase catalytic domain-containing protein4.8e-1864.77Show/hide
Query:  MKINESERVSDYFTRVQTVVNQLKRNGETLTNARVVEKILRSLTNDFQNVVCAMEESKNLEKMTIDEL-----AEKKTTRSHRGGLTN
        M + ESE VSDY T VQTVVNQLK NGETL ++RVVEKILRSLT+DF+NVVCA+EESK+LE++TID L     A ++   S RGG +N
Subjt:  MKINESERVSDYFTRVQTVVNQLKRNGETLTNARVVEKILRSLTNDFQNVVCAMEESKNLEKMTIDEL-----AEKKTTRSHRGGLTN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATAAACGAGTCAGAAAGAGTATCTGACTACTTCACCCGAGTTCAAACGGTGGTGAACCAACTTAAACGCAATGGAGAAACCCTCACAAATGCCAGGGTTGTGGA
GAAAATTCTTCGATCATTGACAAATGACTTTCAAAATGTGGTATGTGCAATGGAGGAGTCAAAGAATTTGGAAAAAATGACTATTGATGAACTAGCAGAAAAAAAGACAA
CAAGAAGTCATAGAGGTGGCCTTACAAACAAAGATGACCATCAAAGAAGACAAGGCAATGTATGCATAACACAATCGAGGAAGAGGACGTGGCAGTTTCAGTCGCGGCAA
AGGTCATGGTCATGGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAATAAACGAGTCAGAAAGAGTATCTGACTACTTCACCCGAGTTCAAACGGTGGTGAACCAACTTAAACGCAATGGAGAAACCCTCACAAATGCCAGGGTTGTGGA
GAAAATTCTTCGATCATTGACAAATGACTTTCAAAATGTGGTATGTGCAATGGAGGAGTCAAAGAATTTGGAAAAAATGACTATTGATGAACTAGCAGAAAAAAAGACAA
CAAGAAGTCATAGAGGTGGCCTTACAAACAAAGATGACCATCAAAGAAGACAAGGCAATGTATGCATAACACAATCGAGGAAGAGGACGTGGCAGTTTCAGTCGCGGCAA
AGGTCATGGTCATGGAAATAA
Protein sequenceShow/hide protein sequence
MKINESERVSDYFTRVQTVVNQLKRNGETLTNARVVEKILRSLTNDFQNVVCAMEESKNLEKMTIDELAEKKTTRSHRGGLTNKDDHQRRQGNVCITQSRKRTWQFQSRQ
RSWSWK