; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0017425 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017425
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionStructural constituent of nuclear pore isoform 1
Genome locationchr11:2529721..2532719
RNA-Seq ExpressionPI0017425
SyntenyPI0017425
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140493.1 uncharacterized protein LOC101205732 [Cucumis sativus]3.8e-8175.44Show/hide
Query:  MAFESSSVVLSTSNSTDNTSNT------------TPFPKFDLGPVPSALEVDAAVTALQSLLQEWFSLESMSKWLQPLMNSSYSSILDSRGYRLLCKGFQ
        MAF+SSS VLSTS+STDNTSN+            TPFP FDLGPVPSA+EVDAAVTAL+SLLQEWFSLES+SKWLQPLMNSS SSILDSRGYRLL KGF+
Subjt:  MAFESSSVVLSTSNSTDNTSNT------------TPFPKFDLGPVPSALEVDAAVTALQSLLQEWFSLESMSKWLQPLMNSSYSSILDSRGYRLLCKGFQ

Query:  WMLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQLPSSGGNGNTGSSKLGSDFGNAILSWILQMSLTKIRELIENFVSLLNNAFY-------------
        W+L DPTFKGLV+SLCLDK+VW+AI NHGIVEKLQ+LPSSGGNGNTGSSK GS+FGN ILSWILQMS +KIREL+ENFVSLLN AF              
Subjt:  WMLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQLPSSGGNGNTGSSKLGSDFGNAILSWILQMSLTKIRELIENFVSLLNNAFY-------------

Query:  EIDEKIQSALVLSLVVMLIVVVARVQIA
        E+DEKIQSA +LSLV+M+IVVVARVQIA
Subjt:  EIDEKIQSALVLSLVVMLIVVVARVQIA

XP_008459730.1 PREDICTED: uncharacterized protein LOC103498772 [Cucumis melo]2.8e-8478.85Show/hide
Query:  MAFESSSVVLSTSNSTDNTSNT-----------TPFPKFDLGPVPSALEVDAAVTALQSLLQEWFSLESMSKWLQPLMNSSYSSILDSRGYRLLCKGFQW
        MAF+SSS VLSTS+ST NTSN+           TPFP FDLGPVPS LEV+AAV ALQSLLQEWFSLESMSKWLQPLMNSS SSIL SRGY+LLCKGFQW
Subjt:  MAFESSSVVLSTSNSTDNTSNT-----------TPFPKFDLGPVPSALEVDAAVTALQSLLQEWFSLESMSKWLQPLMNSSYSSILDSRGYRLLCKGFQW

Query:  MLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQLPSSGGNGNTGSSKLGSDFGNAILSWILQMSLTKIRELIENFVSLLNNAFY-------------E
        +LTDPTFKGLV+SLCLDK+VW+AI+NHGIVEKLQ+LPSSGGNGNTGSSK G DFGN ILSWILQ+SLTKIRELIENFVSLLNNAF              E
Subjt:  MLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQLPSSGGNGNTGSSKLGSDFGNAILSWILQMSLTKIRELIENFVSLLNNAFY-------------E

Query:  IDEKIQSALVLSLVVMLIVVVARVQIA
        IDEKIQS+LVLSLVVMLIVVVARVQIA
Subjt:  IDEKIQSALVLSLVVMLIVVVARVQIA

XP_022959467.1 uncharacterized protein LOC111460433 [Cucurbita moschata]2.8e-6867.81Show/hide
Query:  MAFESSSVVLSTSNSTD----------------NTSNTTPFPKFDLGPVPSALEVDAAVTALQSLLQEWFSLESMSKWLQPLMNSSYSSILDSRGYRLLC
        MAF+S  VV ST N+                  +T       KFDLGPVPS  EVDAAVTALQSLLQE+FS ES+SKWLQPL+NS  SSIL SRGY+LLC
Subjt:  MAFESSSVVLSTSNSTD----------------NTSNTTPFPKFDLGPVPSALEVDAAVTALQSLLQEWFSLESMSKWLQPLMNSSYSSILDSRGYRLLC

Query:  KGFQWMLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQLPSS-GGNGNTGSSKLGSDFGNAILSWILQMSLTKIRELIENFVSLLNNAFY--------
        KGFQW+LTDPT KGLVVSLCLDKNVWDAIKN+GIVEKLQ+LPSS GGNGN GSSK G+D G+ ILSWILQMSLTKI ELI+NFV LLNNAF         
Subjt:  KGFQWMLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQLPSS-GGNGNTGSSKLGSDFGNAILSWILQMSLTKIRELIENFVSLLNNAFY--------

Query:  -----EIDEKIQSALVLSLVVMLIVVVARVQIA
             EIDEKIQS+ VLSL++MLIVVV+RVQIA
Subjt:  -----EIDEKIQSALVLSLVVMLIVVVARVQIA

XP_023549361.1 uncharacterized protein LOC111807735 [Cucurbita pepo subsp. pepo]3.7e-6868.24Show/hide
Query:  MAFESSSVVLSTSNS------------TDNTSNTTPFP----KFDLGPVPSALEVDAAVTALQSLLQEWFSLESMSKWLQPLMNSSYSSILDSRGYRLLC
        MAF+S  VV ST N+            T+  S  T  P    KFDLGPVPS  EVDAAVTALQSLLQE+FS+ES+SKWLQPL+NS  SSIL SRGY+LLC
Subjt:  MAFESSSVVLSTSNS------------TDNTSNTTPFP----KFDLGPVPSALEVDAAVTALQSLLQEWFSLESMSKWLQPLMNSSYSSILDSRGYRLLC

Query:  KGFQWMLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQLPSS-GGNGNTGSSKLGSDFGNAILSWILQMSLTKIRELIENFVSLLNNAFY--------
        KGFQW+LTDP+ KGLVVSLCLDKNVWDAIKN+GIVEKLQ+LPSS GGNGN GSSK G+D G+ ILSWILQMSLTKI ELI+NFV LLNNAF         
Subjt:  KGFQWMLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQLPSS-GGNGNTGSSKLGSDFGNAILSWILQMSLTKIRELIENFVSLLNNAFY--------

Query:  -----EIDEKIQSALVLSLVVMLIVVVARVQIA
             EIDEKIQS+ VLSL++MLIVVV+R QIA
Subjt:  -----EIDEKIQSALVLSLVVMLIVVVARVQIA

XP_038875839.1 uncharacterized protein LOC120068201 [Benincasa hispida]6.7e-7068.97Show/hide
Query:  MAFESSSVVLSTSNSTDNTSNT---------------TPFPKFDLGPVPSALEVDAAVTALQSLLQEWFSLESMSKWLQPLMNSSYSSILDSRGYRLLCK
        M F+S SVV STSN +D+T N+               T  PK DLGPVPS +EVDAAV ALQSLLQE FSL S+SKWLQPLMNS  SSIL SRGYRLLCK
Subjt:  MAFESSSVVLSTSNSTDNTSNT---------------TPFPKFDLGPVPSALEVDAAVTALQSLLQEWFSLESMSKWLQPLMNSSYSSILDSRGYRLLCK

Query:  GFQWMLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQLPSS-GGNGNTGSSKLGSDFGNAILSWILQMSLTKIRELIENFVSLLNNAFY---------
        G QW+LTDPTFKGLV+SLCLDK+VW+AI+N+GIVEKLQ+LPSS GGNGN  SSK G DFGNAILSWIL MSLTKIRELIENFV LLNNAF          
Subjt:  GFQWMLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQLPSS-GGNGNTGSSKLGSDFGNAILSWILQMSLTKIRELIENFVSLLNNAFY---------

Query:  ----EIDEKIQSALVLSLVVMLIVVVARVQIA
            EIDEKIQS+  LSLV++LIV+VARVQ+A
Subjt:  ----EIDEKIQSALVLSLVVMLIVVVARVQIA

TrEMBL top hitse value%identityAlignment
A0A0A0KFP6 Uncharacterized protein1.8e-8175.44Show/hide
Query:  MAFESSSVVLSTSNSTDNTSNT------------TPFPKFDLGPVPSALEVDAAVTALQSLLQEWFSLESMSKWLQPLMNSSYSSILDSRGYRLLCKGFQ
        MAF+SSS VLSTS+STDNTSN+            TPFP FDLGPVPSA+EVDAAVTAL+SLLQEWFSLES+SKWLQPLMNSS SSILDSRGYRLL KGF+
Subjt:  MAFESSSVVLSTSNSTDNTSNT------------TPFPKFDLGPVPSALEVDAAVTALQSLLQEWFSLESMSKWLQPLMNSSYSSILDSRGYRLLCKGFQ

Query:  WMLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQLPSSGGNGNTGSSKLGSDFGNAILSWILQMSLTKIRELIENFVSLLNNAFY-------------
        W+L DPTFKGLV+SLCLDK+VW+AI NHGIVEKLQ+LPSSGGNGNTGSSK GS+FGN ILSWILQMS +KIREL+ENFVSLLN AF              
Subjt:  WMLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQLPSSGGNGNTGSSKLGSDFGNAILSWILQMSLTKIRELIENFVSLLNNAFY-------------

Query:  EIDEKIQSALVLSLVVMLIVVVARVQIA
        E+DEKIQSA +LSLV+M+IVVVARVQIA
Subjt:  EIDEKIQSALVLSLVVMLIVVVARVQIA

A0A1S3CC23 uncharacterized protein LOC1034987721.4e-8478.85Show/hide
Query:  MAFESSSVVLSTSNSTDNTSNT-----------TPFPKFDLGPVPSALEVDAAVTALQSLLQEWFSLESMSKWLQPLMNSSYSSILDSRGYRLLCKGFQW
        MAF+SSS VLSTS+ST NTSN+           TPFP FDLGPVPS LEV+AAV ALQSLLQEWFSLESMSKWLQPLMNSS SSIL SRGY+LLCKGFQW
Subjt:  MAFESSSVVLSTSNSTDNTSNT-----------TPFPKFDLGPVPSALEVDAAVTALQSLLQEWFSLESMSKWLQPLMNSSYSSILDSRGYRLLCKGFQW

Query:  MLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQLPSSGGNGNTGSSKLGSDFGNAILSWILQMSLTKIRELIENFVSLLNNAFY-------------E
        +LTDPTFKGLV+SLCLDK+VW+AI+NHGIVEKLQ+LPSSGGNGNTGSSK G DFGN ILSWILQ+SLTKIRELIENFVSLLNNAF              E
Subjt:  MLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQLPSSGGNGNTGSSKLGSDFGNAILSWILQMSLTKIRELIENFVSLLNNAFY-------------E

Query:  IDEKIQSALVLSLVVMLIVVVARVQIA
        IDEKIQS+LVLSLVVMLIVVVARVQIA
Subjt:  IDEKIQSALVLSLVVMLIVVVARVQIA

A0A5D3DM87 Uncharacterized protein1.4e-8478.85Show/hide
Query:  MAFESSSVVLSTSNSTDNTSNT-----------TPFPKFDLGPVPSALEVDAAVTALQSLLQEWFSLESMSKWLQPLMNSSYSSILDSRGYRLLCKGFQW
        MAF+SSS VLSTS+ST NTSN+           TPFP FDLGPVPS LEV+AAV ALQSLLQEWFSLESMSKWLQPLMNSS SSIL SRGY+LLCKGFQW
Subjt:  MAFESSSVVLSTSNSTDNTSNT-----------TPFPKFDLGPVPSALEVDAAVTALQSLLQEWFSLESMSKWLQPLMNSSYSSILDSRGYRLLCKGFQW

Query:  MLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQLPSSGGNGNTGSSKLGSDFGNAILSWILQMSLTKIRELIENFVSLLNNAFY-------------E
        +LTDPTFKGLV+SLCLDK+VW+AI+NHGIVEKLQ+LPSSGGNGNTGSSK G DFGN ILSWILQ+SLTKIRELIENFVSLLNNAF              E
Subjt:  MLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQLPSSGGNGNTGSSKLGSDFGNAILSWILQMSLTKIRELIENFVSLLNNAFY-------------E

Query:  IDEKIQSALVLSLVVMLIVVVARVQIA
        IDEKIQS+LVLSLVVMLIVVVARVQIA
Subjt:  IDEKIQSALVLSLVVMLIVVVARVQIA

A0A6J1H4L7 uncharacterized protein LOC1114604331.4e-6867.81Show/hide
Query:  MAFESSSVVLSTSNSTD----------------NTSNTTPFPKFDLGPVPSALEVDAAVTALQSLLQEWFSLESMSKWLQPLMNSSYSSILDSRGYRLLC
        MAF+S  VV ST N+                  +T       KFDLGPVPS  EVDAAVTALQSLLQE+FS ES+SKWLQPL+NS  SSIL SRGY+LLC
Subjt:  MAFESSSVVLSTSNSTD----------------NTSNTTPFPKFDLGPVPSALEVDAAVTALQSLLQEWFSLESMSKWLQPLMNSSYSSILDSRGYRLLC

Query:  KGFQWMLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQLPSS-GGNGNTGSSKLGSDFGNAILSWILQMSLTKIRELIENFVSLLNNAFY--------
        KGFQW+LTDPT KGLVVSLCLDKNVWDAIKN+GIVEKLQ+LPSS GGNGN GSSK G+D G+ ILSWILQMSLTKI ELI+NFV LLNNAF         
Subjt:  KGFQWMLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQLPSS-GGNGNTGSSKLGSDFGNAILSWILQMSLTKIRELIENFVSLLNNAFY--------

Query:  -----EIDEKIQSALVLSLVVMLIVVVARVQIA
             EIDEKIQS+ VLSL++MLIVVV+RVQIA
Subjt:  -----EIDEKIQSALVLSLVVMLIVVVARVQIA

A0A6J1L5J5 uncharacterized protein LOC1114993144.1e-6575.26Show/hide
Query:  KFDLGPVPSALEVDAAVTALQSLLQEWFSLESMSKWLQPLMNSSYSSILDSRGYRLLCKGFQWMLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQLP
        KFDLGPVPS  EVDAAV ALQSLLQE+FS+ES+SKWLQPL+NS  SSIL SRGY LLCKG QW+LTDPT KGLVVSLCLDKNV DAIKN+GIVEKLQ+LP
Subjt:  KFDLGPVPSALEVDAAVTALQSLLQEWFSLESMSKWLQPLMNSSYSSILDSRGYRLLCKGFQWMLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQLP

Query:  SS-GGNGNTGSSKLGSDFGNAILSWILQMSLTKIRELIENFVSLLNNAFY-------------EIDEKIQSALVLSLVVMLIVVVARVQI
        SS GGNGN GSSK G+D G+ ILSWILQMSLTKI ELI+NFV LLNNAF              EIDEKIQS+ VLSL++MLIVVV+R QI
Subjt:  SS-GGNGNTGSSKLGSDFGNAILSWILQMSLTKIRELIENFVSLLNNAFY-------------EIDEKIQSALVLSLVVMLIVVVARVQI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G25170.1 Uncharacterised conserved protein (UCP012943)2.9e-1025.9Show/hide
Query:  SLESMSKWLQPLMNSSYSSILDSRGYRLLCKGFQWMLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQLPSSGGNGNTGSSKLGSDFGNA---ILSWI
        S  S S W++P M+  +S  L    Y  +   F  + T+P+ + +VVSL  DK VW+A+ N+ +V +++ L ++G + +  +S+      NA    + W+
Subjt:  SLESMSKWLQPLMNSSYSSILDSRGYRLLCKGFQWMLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQLPSSGGNGNTGSSKLGSDFGNA---ILSWI

Query:  LQMSLTKIRELIENFVSLLNNAF--YE----------------IDEKIQSALVLSLVVMLIVVVAR
           ++ K  E+      ++   F  Y                 ++EK+ ++++LS++VML+V+V+R
Subjt:  LQMSLTKIRELIENFVSLLNNAF--YE----------------IDEKIQSALVLSLVVMLIVVVAR

AT4G25170.2 Uncharacterised conserved protein (UCP012943)2.9e-1025.9Show/hide
Query:  SLESMSKWLQPLMNSSYSSILDSRGYRLLCKGFQWMLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQLPSSGGNGNTGSSKLGSDFGNA---ILSWI
        S  S S W++P M+  +S  L    Y  +   F  + T+P+ + +VVSL  DK VW+A+ N+ +V +++ L ++G + +  +S+      NA    + W+
Subjt:  SLESMSKWLQPLMNSSYSSILDSRGYRLLCKGFQWMLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQLPSSGGNGNTGSSKLGSDFGNA---ILSWI

Query:  LQMSLTKIRELIENFVSLLNNAF--YE----------------IDEKIQSALVLSLVVMLIVVVAR
           ++ K  E+      ++   F  Y                 ++EK+ ++++LS++VML+V+V+R
Subjt:  LQMSLTKIRELIENFVSLLNNAF--YE----------------IDEKIQSALVLSLVVMLIVVVAR

AT5G61490.1 Uncharacterised conserved protein (UCP012943)1.3e-0727.37Show/hide
Query:  PSALEVDAAVTALQSLLQEWFSLESMSK--------WLQPLMNSSYSSILDSRGYRLLCKGFQWMLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQL
        P   EVD A +ALQ +  +    ES  +        W++P +    +S+L       L   F    TDP+ + +V+SL  DK VWDA+ N+ +V +L   
Subjt:  PSALEVDAAVTALQSLLQEWFSLESMSK--------WLQPLMNSSYSSILDSRGYRLLCKGFQWMLTDPTFKGLVVSLCLDKNVWDAIKNHGIVEKLQQL

Query:  PSSGGNGNTGSSKLGSDFGNAILSWILQMSLTKIRELIENFVSLLNNAFYEID---------------EKIQSALVLSLVVMLIVVVARV
               N   S+  S      L  + + S  KI + +E     + + F  +                EK+Q  ++L++VV+LIV+V RV
Subjt:  PSSGGNGNTGSSKLGSDFGNAILSWILQMSLTKIRELIENFVSLLNNAFYEID---------------EKIQSALVLSLVVMLIVVVARV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTCGAATCATCCTCTGTAGTTTTATCCACCAGTAATTCCACTGATAATACTTCCAACACGACCCCTTTTCCCAAATTTGATTTGGGACCTGTTCCATCGGCTCT
AGAAGTTGATGCTGCAGTTACTGCTCTTCAGAGTTTGTTGCAGGAGTGGTTTTCACTTGAATCGATGTCAAAATGGCTTCAGCCGCTGATGAACTCCAGTTATTCAAGCA
TTTTGGATTCTCGTGGTTATCGATTACTTTGTAAAGGTTTTCAATGGATGCTAACAGATCCTACTTTCAAGGGACTGGTAGTTTCACTGTGTTTGGACAAAAATGTTTGG
GATGCTATTAAAAACCATGGGATTGTAGAGAAGCTCCAGCAGTTACCTTCTTCAGGTGGAAATGGAAACACTGGGAGCTCAAAACTGGGATCTGACTTTGGTAATGCCAT
TCTAAGCTGGATTTTGCAGATGTCACTCACAAAAATCAGGGAGCTAATAGAAAACTTTGTCTCCCTGTTGAACAATGCATTTTATGAGATAGATGAAAAAATTCAATCCG
CATTGGTTCTGTCCTTGGTCGTCATGTTGATTGTGGTCGTTGCTCGAGTTCAGATCGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTTCGAATCATCCTCTGTAGTTTTATCCACCAGTAATTCCACTGATAATACTTCCAACACGACCCCTTTTCCCAAATTTGATTTGGGACCTGTTCCATCGGCTCT
AGAAGTTGATGCTGCAGTTACTGCTCTTCAGAGTTTGTTGCAGGAGTGGTTTTCACTTGAATCGATGTCAAAATGGCTTCAGCCGCTGATGAACTCCAGTTATTCAAGCA
TTTTGGATTCTCGTGGTTATCGATTACTTTGTAAAGGTTTTCAATGGATGCTAACAGATCCTACTTTCAAGGGACTGGTAGTTTCACTGTGTTTGGACAAAAATGTTTGG
GATGCTATTAAAAACCATGGGATTGTAGAGAAGCTCCAGCAGTTACCTTCTTCAGGTGGAAATGGAAACACTGGGAGCTCAAAACTGGGATCTGACTTTGGTAATGCCAT
TCTAAGCTGGATTTTGCAGATGTCACTCACAAAAATCAGGGAGCTAATAGAAAACTTTGTCTCCCTGTTGAACAATGCATTTTATGAGATAGATGAAAAAATTCAATCCG
CATTGGTTCTGTCCTTGGTCGTCATGTTGATTGTGGTCGTTGCTCGAGTTCAGATCGCATAA
Protein sequenceShow/hide protein sequence
MAFESSSVVLSTSNSTDNTSNTTPFPKFDLGPVPSALEVDAAVTALQSLLQEWFSLESMSKWLQPLMNSSYSSILDSRGYRLLCKGFQWMLTDPTFKGLVVSLCLDKNVW
DAIKNHGIVEKLQQLPSSGGNGNTGSSKLGSDFGNAILSWILQMSLTKIRELIENFVSLLNNAFYEIDEKIQSALVLSLVVMLIVVVARVQIA