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PI0017467 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017467
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionAnaphase-promoting complex subunit 11
Genome locationchr01:16688435..16690855
RNA-Seq ExpressionPI0017467
SyntenyPI0017467
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0031145 - anaphase-promoting complex-dependent catabolic process (biological process)
GO:0051301 - cell division (biological process)
GO:0005680 - anaphase-promoting complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
GO:0097602 - cullin family protein binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR024991 - Anaphase-promoting complex subunit 11, RING-H2 finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV69476.1 zf-Apc11 domain-containing protein, partial [Cephalotus follicularis]1.5e-4697.56Show/hide
Query:  SVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
        SVK RWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Subjt:  SVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG

GAY61640.1 hypothetical protein CUMW_211580, partial [Citrus unshiu]2.6e-4678.38Show/hide
Query:  MKVKVLRILLS-------IINYIVILPSVK--YRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHC
        MKVK+LRILL+       ++N+      +K   RWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQT QAHC
Subjt:  MKVKVLRILLS-------IINYIVILPSVK--YRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHC

Query:  PMCRREWQFKG
        PMCRREWQFKG
Subjt:  PMCRREWQFKG

KAB2630342.1 ring finger [Pyrus ussuriensis x Pyrus communis]8.9e-4794.12Show/hide
Query:  ILPSVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
        I  SV Y+WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Subjt:  ILPSVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG

KYP42684.1 Anaphase-promoting complex subunit 11, partial [Cajanus cajan]1.2e-4691.21Show/hide
Query:  YIVIL---PSVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
        YI+IL     VKYRWHAV+SWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Subjt:  YIVIL---PSVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG

RXH82096.1 hypothetical protein DVH24_036437 [Malus domestica]5.8e-4682.35Show/hide
Query:  MKVKVLRILLSIINYIVILPSVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQF
        MKV +LRILL++             WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQF
Subjt:  MKVKVLRILLSIINYIVILPSVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQF

Query:  KG
        KG
Subjt:  KG

TrEMBL top hitse value%identityAlignment
A0A151RJC8 Anaphase-promoting complex subunit 11 (Fragment)5.6e-4791.21Show/hide
Query:  YIVIL---PSVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
        YI+IL     VKYRWHAV+SWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Subjt:  YIVIL---PSVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG

A0A1Q3BN88 Anaphase-promoting complex subunit 11 (Fragment)7.4e-4797.56Show/hide
Query:  SVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
        SVK RWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Subjt:  SVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG

A0A2H5QAH0 Anaphase-promoting complex subunit 11 (Fragment)1.3e-4678.38Show/hide
Query:  MKVKVLRILLS-------IINYIVILPSVK--YRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHC
        MKVK+LRILL+       ++N+      +K   RWHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQT QAHC
Subjt:  MKVKVLRILLS-------IINYIVILPSVK--YRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHC

Query:  PMCRREWQFKG
        PMCRREWQFKG
Subjt:  PMCRREWQFKG

A0A5N5HW07 Anaphase-promoting complex subunit 114.3e-4794.12Show/hide
Query:  ILPSVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
        I  SV Y+WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG
Subjt:  ILPSVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG

A0A7N2L4B7 Anaphase-promoting complex subunit 111.3e-4682.18Show/hide
Query:  MKVKVLRILLSIINYIVILPSVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQF
        MKVK+LRIL  I+   ++      +WH VASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQF
Subjt:  MKVKVLRILLSIINYIVILPSVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQF

Query:  K
        K
Subjt:  K

SwissProt top hitse value%identityAlignment
Q3ZCF6 Anaphase-promoting complex subunit 112.5e-3672.37Show/hide
Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
        W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILKW+N+Q  Q HCPMCR+EW+FK
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK

Q5R8A2 Anaphase-promoting complex subunit 119.6e-3671.05Show/hide
Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
        W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILKW+++Q  Q HCPMCR+EW+FK
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK

Q9CPX9 Anaphase-promoting complex subunit 112.5e-3672.37Show/hide
Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
        W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILKW+N+Q  Q HCPMCR+EW+FK
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK

Q9M9L0 Anaphase-promoting complex subunit 115.4e-4797.4Show/hide
Query:  RWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
        +WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
Subjt:  RWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK

Q9NYG5 Anaphase-promoting complex subunit 119.6e-3671.05Show/hide
Query:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
        W+ VA+W W A DE CGICRMAF+GCCPDCK+PGDDCPL+WG C+H FH+HCILKW+++Q  Q HCPMCR+EW+FK
Subjt:  WHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK

Arabidopsis top hitse value%identityAlignment
AT3G05870.1 anaphase-promoting complex/cyclosome 113.5e-4983.17Show/hide
Query:  MKVKVLRILLSIINYIVILPSVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQF
        MKVK+LRILL               WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQF
Subjt:  MKVKVLRILLSIINYIVILPSVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQF

Query:  K
        K
Subjt:  K

AT3G05870.2 anaphase-promoting complex/cyclosome 113.5e-4983.17Show/hide
Query:  MKVKVLRILLSIINYIVILPSVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQF
        MKVK+LRILL               WHAVASWTW+AQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQF
Subjt:  MKVKVLRILLSIINYIVILPSVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQF

Query:  K
        K
Subjt:  K

AT3G42830.1 RING/U-box superfamily protein2.1e-1439.02Show/hide
Query:  RWHAVASWTWNAQDETCGICRMAFDGCCPDC-----KLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
        +W AVA W W+   + C ICR      C +C         ++C + WG CNHAFH HCI +W+  +T Q  CP+   EW+F+
Subjt:  RWHAVASWTWNAQDETCGICRMAFDGCCPDC-----KLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK

AT5G20570.1 RING-box 14.3e-1539.02Show/hide
Query:  RWHAVASWTWNAQDETCGICRMAFDGCCPDCK-----LPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK
        +W AVA W W+   + C ICR      C +C+        ++C + WG CNHAFH HCI +W+  +T Q  CP+   EW+F+
Subjt:  RWHAVASWTWNAQDETCGICRMAFDGCCPDCK-----LPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFK

AT5G26640.1 BEST Arabidopsis thaliana protein match is: anaphase-promoting complex/cyclosome 11 (TAIR:AT3G05870.2)3.4e-1281.25Show/hide
Query:  TWNAQDETCGICRMAFDGCCPDCKLPGDDCPL
        TW+AQDETCG+CRM FD  CPDCKLP DDCPL
Subjt:  TWNAQDETCGICRMAFDGCCPDCKLPGDDCPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGTAAAAGTTTTGCGTATCCTTTTGAGTATAATTAACTATATTGTTATCCTCCCTTCCGTAAAATATAGGTGGCATGCTGTTGCATCATGGACTTGGAATGCCCA
AGATGAAACATGTGGAATTTGTAGGATGGCCTTTGATGGTTGTTGCCCTGATTGCAAGCTCCCTGGAGATGATTGCCCATTGATTTGGGGTGCATGCAACCATGCTTTCC
ACCTTCATTGCATCCTAAAATGGGTGAATTCACAGACTTCTCAGGCTCATTGCCCCATGTGCCGCAGAGAATGGCAATTCAAGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGTAAAAGTTTTGCGTATCCTTTTGAGTATAATTAACTATATTGTTATCCTCCCTTCCGTAAAATATAGGTGGCATGCTGTTGCATCATGGACTTGGAATGCCCA
AGATGAAACATGTGGAATTTGTAGGATGGCCTTTGATGGTTGTTGCCCTGATTGCAAGCTCCCTGGAGATGATTGCCCATTGATTTGGGGTGCATGCAACCATGCTTTCC
ACCTTCATTGCATCCTAAAATGGGTGAATTCACAGACTTCTCAGGCTCATTGCCCCATGTGCCGCAGAGAATGGCAATTCAAGGGGTGA
Protein sequenceShow/hide protein sequence
MKVKVLRILLSIINYIVILPSVKYRWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKG