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PI0017475 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017475
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr07:15264509..15264673
RNA-Seq ExpressionPI0017475
SyntenyPI0017475
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046849.1 retrotransposon protein [Cucumis melo var. makuwa]2.0e-1370.37Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWNQWRDELAGKMFSDWELRNQ
        MTN D+ DD+DE DST+ TT S+DIHYI+TS+ W+QWRDELA +MFSDWELRN+
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWNQWRDELAGKMFSDWELRNQ

KAA0054126.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.6e-1368.52Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWNQWRDELAGKMFSDWELRNQ
        MTN D+ D++DE DST+ATT ++DIHYIETS+ W+QWRD+LA +MF+DWELRNQ
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWNQWRDELAGKMFSDWELRNQ

KAA0067286.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]4.5e-1368.52Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWNQWRDELAGKMFSDWELRNQ
        MTN D+ DD+DE DST+ATT ++DIHYIETS+ W++WRD+LA +MFSDWEL NQ
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWNQWRDELAGKMFSDWELRNQ

KAA0067470.1 retrotransposon protein [Cucumis melo var. makuwa]2.0e-1370.37Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWNQWRDELAGKMFSDWELRNQ
        MTN D+ D++DE DST+ATT ++DIHYIETS+ W+QWRD+LA +MFSDWELRNQ
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWNQWRDELAGKMFSDWELRNQ

TYJ99699.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.0e-1370.37Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWNQWRDELAGKMFSDWELRNQ
        MTN D+ D++DE DST+ATT ++DIHYIETS+ W+QWRD+LA +MFSDWELRNQ
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWNQWRDELAGKMFSDWELRNQ

TrEMBL top hitse value%identityAlignment
A0A5A7U033 Retrotransposon protein9.7e-1470.37Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWNQWRDELAGKMFSDWELRNQ
        MTN D+ DD+DE DST+ TT S+DIHYI+TS+ W+QWRDELA +MFSDWELRN+
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWNQWRDELAGKMFSDWELRNQ

A0A5A7UIM7 Putative nuclease HARBI11.3e-1368.52Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWNQWRDELAGKMFSDWELRNQ
        MTN D+ D++DE DST+ATT ++DIHYIETS+ W+QWRD+LA +MF+DWELRNQ
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWNQWRDELAGKMFSDWELRNQ

A0A5A7VJX3 Retrotransposon protein9.7e-1470.37Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWNQWRDELAGKMFSDWELRNQ
        MTN D+ D++DE DST+ATT ++DIHYIETS+ W+QWRD+LA +MFSDWELRNQ
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWNQWRDELAGKMFSDWELRNQ

A0A5D3BL48 Putative nuclease HARBI19.7e-1470.37Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWNQWRDELAGKMFSDWELRNQ
        MTN D+ D++DE DST+ATT ++DIHYIETS+ W+QWRD+LA +MFSDWELRNQ
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWNQWRDELAGKMFSDWELRNQ

A0A5D3DT17 Retrotransposon protein2.2e-1370.37Show/hide
Query:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWNQWRDELAGKMFSDWELRNQ
        MTN D+ D++DE DST+ATT  +DIHYIETSS W QWRD+LA +MF+DWELRNQ
Subjt:  MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWNQWRDELAGKMFSDWELRNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAACAATGACGTACCAGATGACGTTGATGAGGGTGACTCTACATATGCCACCACTGGCAGTGAAGATATTCATTACATAGAGACCTCGAGTGCATGGAATCAATG
GAGGGACGAGCTTGCCGGAAAAATGTTCAGTGATTGGGAGTTGCGTAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAACAATGACGTACCAGATGACGTTGATGAGGGTGACTCTACATATGCCACCACTGGCAGTGAAGATATTCATTACATAGAGACCTCGAGTGCATGGAATCAATG
GAGGGACGAGCTTGCCGGAAAAATGTTCAGTGATTGGGAGTTGCGTAATCAGTAA
Protein sequenceShow/hide protein sequence
MTNNDVPDDVDEGDSTYATTGSEDIHYIETSSAWNQWRDELAGKMFSDWELRNQ