; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0017477 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017477
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionexosome complex component RRP43
Genome locationchr08:8732923..8752187
RNA-Seq ExpressionPI0017477
SyntenyPI0017477
Gene Ontology termsNA
InterPro domainsIPR001247 - Exoribonuclease, phosphorolytic domain 1
IPR020568 - Ribosomal protein S5 domain 2-type fold
IPR027408 - PNPase/RNase PH domain superfamily
IPR036345 - Exoribonuclease, PH domain 2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149399.1 exosome complex component RRP43 isoform X1 [Cucumis sativus]3.6e-15394.1Show/hide
Query:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFH
        MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHL ESIRPDGR+L K     + L  PVSSANGSALAKIGSTTMLAAIKMEVMTPS+ESPDEGCIALDFH
Subjt:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFH

Query:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG
        MPP+CSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFV EEEG
Subjt:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG

Query:  GENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAIS
        GENFEKEPVNKE RKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQL+SFYKPGGSVLAYTSAVQDCIALTRQRSKELQ+ILDEAIS
Subjt:  GENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAIS

Query:  GMEID
        GMEID
Subjt:  GMEID

XP_008460772.1 PREDICTED: exosome complex component RRP43 isoform X1 [Cucumis melo]6.9e-15794.82Show/hide
Query:  IVQTMGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIA
        IVQTMGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRAL K     + L  PVSSANGSALAKIGSTTMLAAIKMEVMTPS+ESPDEGCIA
Subjt:  IVQTMGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIA

Query:  LDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVS
        LDFHMPP+CSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDG+VVFVS
Subjt:  LDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVS

Query:  EEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILD
        EEEGGENFEKEPVNKEKRKLKLNS+PFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQL+SFYKPGGSVLAYTSAVQDCIALTRQRSKELQ+ILD
Subjt:  EEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILD

Query:  EAISGMEID
        EAISGMEID
Subjt:  EAISGMEID

XP_008460773.1 PREDICTED: exosome complex component RRP43 isoform X2 [Cucumis melo]1.1e-15494.75Show/hide
Query:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFH
        MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRAL K     + L  PVSSANGSALAKIGSTTMLAAIKMEVMTPS+ESPDEGCIALDFH
Subjt:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFH

Query:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG
        MPP+CSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDG+VVFVSEEEG
Subjt:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG

Query:  GENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAIS
        GENFEKEPVNKEKRKLKLNS+PFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQL+SFYKPGGSVLAYTSAVQDCIALTRQRSKELQ+ILDEAIS
Subjt:  GENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAIS

Query:  GMEID
        GMEID
Subjt:  GMEID

XP_023544252.1 exosome complex component RRP43 [Cucurbita pepo subsp. pepo]1.0e-15293.77Show/hide
Query:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFH
        MGLPNAASGDLSS+MEVDAFRRLFPIQF+ERHLAESIRPDGRAL K     + L  PVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIA+DFH
Subjt:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFH

Query:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG
        MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG
Subjt:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG

Query:  GENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAIS
        GENFEKE VNKEKRKLKLNS+PFSLTCLLHK YILADPTAEEESVMETIVTVVLDSSGQL+SFYKPGGSVLAYTSAVQDC+ALTRQRSKELQMILDEAIS
Subjt:  GENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAIS

Query:  GMEID
        GMEID
Subjt:  GMEID

XP_038877146.1 exosome complex component RRP43 isoform X2 [Benincasa hispida]1.0e-15293.11Show/hide
Query:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFH
        MGLPNAASGDLSS+MEVDAFRRLFPIQFYERHLAESIRPDGR L K     + L  PVSSANGSALAKIGSTTMLAAIKMEVMTP IESPDEGCIA+DFH
Subjt:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFH

Query:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG
        MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELS+VKGKAAWMAYLD+YCLDADGSLFDAALLSAAAAFSHL+IPVVALNDDGKV+FVSEEEG
Subjt:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG

Query:  GENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAIS
        GENFEKEPVNKE+RKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQL+SFYKPGGSVLAYTSAVQDC+ALTRQRSKELQMILDEAIS
Subjt:  GENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAIS

Query:  GMEID
        GMEID
Subjt:  GMEID

TrEMBL top hitse value%identityAlignment
A0A1S3CD66 exosome complex component RRP43 isoform X13.4e-15794.82Show/hide
Query:  IVQTMGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIA
        IVQTMGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRAL K     + L  PVSSANGSALAKIGSTTMLAAIKMEVMTPS+ESPDEGCIA
Subjt:  IVQTMGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIA

Query:  LDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVS
        LDFHMPP+CSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDG+VVFVS
Subjt:  LDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVS

Query:  EEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILD
        EEEGGENFEKEPVNKEKRKLKLNS+PFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQL+SFYKPGGSVLAYTSAVQDCIALTRQRSKELQ+ILD
Subjt:  EEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILD

Query:  EAISGMEID
        EAISGMEID
Subjt:  EAISGMEID

A0A1S3CEE1 exosome complex component RRP43 isoform X25.4e-15594.75Show/hide
Query:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFH
        MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRAL K     + L  PVSSANGSALAKIGSTTMLAAIKMEVMTPS+ESPDEGCIALDFH
Subjt:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFH

Query:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG
        MPP+CSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDG+VVFVSEEEG
Subjt:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG

Query:  GENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAIS
        GENFEKEPVNKEKRKLKLNS+PFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQL+SFYKPGGSVLAYTSAVQDCIALTRQRSKELQ+ILDEAIS
Subjt:  GENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAIS

Query:  GMEID
        GMEID
Subjt:  GMEID

A0A6J1DFM7 exosome complex component RRP432.3e-15091.8Show/hide
Query:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFH
        MGLPNAASGDLSS+MEVDAFRRLFP+QFYERH AESIRPDGRAL K     + L  PVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIA+DFH
Subjt:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFH

Query:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG
        MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG
Subjt:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG

Query:  GENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAIS
        GENFEKEPVNKEKRKLKL+SIPFSLTC+LHK +ILADPTAEEES+METIVTVVLD SGQL+SFYKPGGSVLA+TSAVQDC+ALTRQR KELQ+ILDEAIS
Subjt:  GENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAIS

Query:  GMEID
        GMEID
Subjt:  GMEID

A0A6J1ESF5 exosome complex component RRP431.9e-15293.44Show/hide
Query:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFH
        MGLPNAASGDLSS+MEVDAFRRLFPIQF+ERHLAESIRPDGRAL K     + L  PVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIA+DFH
Subjt:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFH

Query:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG
        MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIP VALNDDGKVVFVSEEEG
Subjt:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG

Query:  GENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAIS
        GENFEKE VNKEKRKLKLNS+PFSLTCLLHK YILADPTAEEESVMETIVTVVLDSSGQL+SFYKPGGSVLAYTSAVQDC+ALTRQRSKELQMILDEAIS
Subjt:  GENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAIS

Query:  GMEID
        GMEID
Subjt:  GMEID

A0A6J1HVL5 exosome complex component RRP431.2e-15193.11Show/hide
Query:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFH
        MGLPNAASGDLSS+MEVDAFRRLFPIQF+ERHLAESIRPDGRAL K     + L  PVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIA+DFH
Subjt:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFH

Query:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG
        MP ICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEE+G
Subjt:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG

Query:  GENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAIS
        GENFEKE VNKEKRKLKLNS+PFSLTCLLHK YILADPTAEEESVMETIVTVVLDSSGQL+SFYKPGGSVLAYTSAVQDC+ALTRQRSKELQMILDEAIS
Subjt:  GENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAIS

Query:  GMEID
        GMEID
Subjt:  GMEID

SwissProt top hitse value%identityAlignment
Q10205 Exosome complex component rrp431.8e-3029.85Show/hide
Query:  FRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFHMPPICSPIVRPGRPAEAAP
        F+++ P Q+    L + +R DGR++ +   + ++    +S+ANGSA+ + G    +  IK E+  P   SP+EG I  +  + P+CS   +PG P++ A 
Subjt:  FRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFHMPPICSPIVRPGRPAEAAP

Query:  VISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLN
        V+S++L  T+  S +I+L+ L + + KAAW+ Y DI CL+ DGS FD A  +  AA   +++P    ++D + V  +             +   R ++L+
Subjt:  VISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLN

Query:  SIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQR
        +   S +  +    +LADPT EEE +    +T++L+SS  ++   K GG+ +     ++ CI + R +
Subjt:  SIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQR

Q2KHU3 Exosome complex component RRP431.9e-4033.33Show/hide
Query:  FRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFHMPPICSPIVRPGRPAEAAP
        F+ + P+++Y R L E+ RPDGR L +  T   + V  + +A+GSAL K+G+TT++  IK E   P  ++PD+G +  +  + P+CS   R G P E A 
Subjt:  FRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFHMPPICSPIVRPGRPAEAAP

Query:  VISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLN
        V S+ ++D I +S +I   +L +  GK AW+ Y D+ CL+ DG++ DA   +  AA  ++Q+P V +N++  +  V+              K+K  L + 
Subjt:  VISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLN

Query:  SIPFSLT-CLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAISGME
        + P + +  +     ++ DPT EEE +    +TVV+D  G+L   +KPGGS L   + +QDC++    R KE++ ++DE    M+
Subjt:  SIPFSLT-CLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAISGME

Q8TYC2 Exosome complex component Rrp426.1e-3132.68Show/hide
Query:  RPDGRALEKLETQPL-LLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMID
        R DGR  E  E +P+ +    +S ANGSAL ++G+T ++  +K+EV  P  +SP+EG +A++  + P+  P   PG P E A  +S+ +   I  S MID
Subjt:  RPDGRALEKLETQPL-LLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMID

Query:  LRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILA
        L EL + +G+  W+ ++DI+ LD DG+LFDA+++ + +A S  ++P   + DD               E E + ++   L +N  P S+T     +Y+L 
Subjt:  LRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILA

Query:  DPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTS-AVQDCIALTRQRSKELQ
        DP  EEE +M+T +TV +  SG++ +  K  G +  +    ++D I L  ++++E++
Subjt:  DPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTS-AVQDCIALTRQRSKELQ

Q96B26 Exosome complex component RRP435.3e-4333.68Show/hide
Query:  FRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFHMPPICSPIVRPGRPAEAAP
        F+ + P+++Y R L E+ RPDGR L +  T   + +  +S+A+GSAL K+G+TT++  +K E   PS ++PD+G +  +  +PP+CS   R G P E A 
Subjt:  FRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFHMPPICSPIVRPGRPAEAAP

Query:  VISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLN
        V S+ ++D I +S +I   +L +  GK  W+ Y D+ CLD DG++ DA   +  AA  ++Q+P V +N++  +  V+              K+K  L + 
Subjt:  VISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLN

Query:  SIPFSLT-CLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAISGME
        + P + +  +     ++ DPT EEE +    +T+V+D  G+L   +KPGGS L   + +QDC++    R KE++ ++DE I  M+
Subjt:  SIPFSLT-CLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAISGME

Q9D753 Exosome complex component RRP433.5e-4233.8Show/hide
Query:  FRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFHMPPICSPIVRPGRPAEAAP
        F+ + P+++Y R L E+ RPDGR L +      + +  +S+A+GSAL K+G+TT++  +K E   P +++PD G +  +  +PP+CS   R G P E A 
Subjt:  FRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFHMPPICSPIVRPGRPAEAAP

Query:  VISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLN
        V S+ ++D + +S +I   +L +  GK AW+ Y D+ CLD DG++ DA   +  AA  ++Q+P V +N++  +  V+              K+K  L + 
Subjt:  VISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLN

Query:  SIPFSLT-CLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAISGM
        + P + +  +     ++ DPT EEE +    +TVV D  G+L   +KPGGS L   + +QDC++    R KE+  +LDE I  M
Subjt:  SIPFSLT-CLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAISGM

Arabidopsis top hitse value%identityAlignment
AT1G60080.1 3'-5'-exoribonuclease family protein1.5e-11770.45Show/hide
Query:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFH
        MG+P+AA  DLS++MEVDAFRR+FP++F+ERHL+ES+RPDGR L K     ++ +  VS+A+GSALAKIGSTTMLAAI+MEVMTPS +SPDEGCIA++FH
Subjt:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFH

Query:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG
        MPPICSP VRPGRPAEAAPVISK+LSDTI SSGMIDL+EL LV GKAAWM YLDIYCLDADG+LFDAALL+A AAFS+LQIP+VALND+G++V V+ E+ 
Subjt:  MPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEG

Query:  GEN---FEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDE
         +N    EKE VNKEKRKL L +IPFSLTC+LHK YILADPT EEES+M+T+VTVVLDSS Q++SFYK GG+ LAY+SA++ C+ L R+R+KEL+ IL E
Subjt:  GEN---FEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDE

Query:  AISGMEID
            M+ID
Subjt:  AISGMEID

AT3G07750.1 3'-5'-exoribonuclease family protein1.0e-2029.43Show/hide
Query:  FYERHLAESIRPDGRALEKLETQPLLL-VRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFHMPPICSPIV--RPGR--PAEAAPVIS
        F +  +A+ +R DGR  ++L  +P+ +    +  ANGSA  +IG T ++A++K E+  PS   PD+G +A+     P   P    R G    +E A  + 
Subjt:  FYERHLAESIRPDGRALEKLETQPLLL-VRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFHMPPICSPIV--RPGR--PAEAAPVIS

Query:  KQLSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSI
        + L    S +G  I+L  L + +GK  W  Y+D   + +DG+L DA   +  AA ++  IP        KV   +E    E  E +  ++E  +   +S+
Subjt:  KQLSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSI

Query:  PFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAISGME
        P  +T      + + D TAEEES M + V++ ++ +G +    K  GS L   S + D I++ +  ++ L   LD  IS  E
Subjt:  PFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAISGME

AT3G07750.2 3'-5'-exoribonuclease family protein1.0e-2029.43Show/hide
Query:  FYERHLAESIRPDGRALEKLETQPLLL-VRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFHMPPICSPIV--RPGR--PAEAAPVIS
        F +  +A+ +R DGR  ++L  +P+ +    +  ANGSA  +IG T ++A++K E+  PS   PD+G +A+     P   P    R G    +E A  + 
Subjt:  FYERHLAESIRPDGRALEKLETQPLLL-VRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIALDFHMPPICSPIV--RPGR--PAEAAPVIS

Query:  KQLSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSI
        + L    S +G  I+L  L + +GK  W  Y+D   + +DG+L DA   +  AA ++  IP        KV   +E    E  E +  ++E  +   +S+
Subjt:  KQLSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNSI

Query:  PFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAISGME
        P  +T      + + D TAEEES M + V++ ++ +G +    K  GS L   S + D I++ +  ++ L   LD  IS  E
Subjt:  PFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAISGME


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAACCAATGATGAAGAACAAACTATTGTCGGTGATGAAAACGCCAATGATGTACAAAGAGTTGCAAGAAGTAAAGAAAAAGGAGAAAAAAAAGAAAAAATAAAGGA
ATACCTGATCGCCGATGATGAAAAAGTTGTCGTCGATGATGAAAATGCCAATGATCTAGAAGTATTACTATTGGTGATTAAAACGACAATGAAAAATTGTGACACTTCAG
TTTTGCTTCACGAACGCTGCGGGAATAGACCCCCACCGCGCCACTCGCTCTCTCTCTCACGCCAACTCTCCCTCGTCCCCTCCGCTGCTCGCAGCCGCTCTTCCTCCGCC
GCTCACTACCGAAGCCCCGCCGCCTCCACCCGCTGTCGACCGCCGATTGTACAAACAATGGGACTGCCAAATGCTGCTTCTGGGGACTTGTCGTCGCAAATGGAAGTCGA
TGCTTTTAGACGACTCTTTCCAATTCAGTTTTATGAGCGCCATCTTGCTGAATCAATACGTCCTGATGGAAGAGCACTGGAAAAGCTAGAGACACAACCATTGCTCTTGG
TTAGACCAGTATCTTCTGCGAACGGGTCAGCCCTGGCTAAGATTGGTTCGACGACAATGTTGGCTGCTATTAAAATGGAAGTAATGACACCTTCTATAGAGTCACCGGAT
GAGGGTTGCATAGCTCTTGATTTCCACATGCCTCCAATATGCTCTCCAATTGTTAGGCCTGGGAGACCAGCGGAAGCAGCACCTGTGATTTCAAAGCAGTTATCTGACAC
TATTTCGAGTTCTGGGATGATTGATCTGAGAGAACTATCTCTTGTTAAAGGAAAAGCTGCTTGGATGGCTTACTTGGATATTTACTGTTTGGACGCTGATGGATCTCTTT
TTGATGCTGCACTTCTTTCTGCAGCAGCTGCATTTTCTCATTTGCAAATCCCTGTTGTTGCTCTAAATGATGATGGAAAAGTAGTATTTGTCTCTGAGGAAGAAGGGGGA
GAAAACTTTGAGAAGGAACCTGTCAATAAAGAGAAAAGGAAACTGAAATTGAACTCTATTCCTTTCTCATTAACTTGCCTACTCCACAAGAAGTACATCTTGGCCGATCC
TACTGCAGAGGAGGAGTCCGTCATGGAAACTATTGTAACTGTTGTTTTGGATTCATCTGGTCAACTGATTTCCTTCTACAAGCCGGGTGGATCTGTTCTTGCTTATACAT
CAGCTGTTCAGGATTGTATTGCATTGACCAGACAAAGATCGAAAGAACTACAGATGATTTTAGATGAAGCAATTTCTGGTATGGAAATCGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGATAACCAATGATGAAGAACAAACTATTGTCGGTGATGAAAACGCCAATGATGTACAAAGAGTTGCAAGAAGTAAAGAAAAAGGAGAAAAAAAAGAAAAAATAAAGGA
ATACCTGATCGCCGATGATGAAAAAGTTGTCGTCGATGATGAAAATGCCAATGATCTAGAAGTATTACTATTGGTGATTAAAACGACAATGAAAAATTGTGACACTTCAG
TTTTGCTTCACGAACGCTGCGGGAATAGACCCCCACCGCGCCACTCGCTCTCTCTCTCACGCCAACTCTCCCTCGTCCCCTCCGCTGCTCGCAGCCGCTCTTCCTCCGCC
GCTCACTACCGAAGCCCCGCCGCCTCCACCCGCTGTCGACCGCCGATTGTACAAACAATGGGACTGCCAAATGCTGCTTCTGGGGACTTGTCGTCGCAAATGGAAGTCGA
TGCTTTTAGACGACTCTTTCCAATTCAGTTTTATGAGCGCCATCTTGCTGAATCAATACGTCCTGATGGAAGAGCACTGGAAAAGCTAGAGACACAACCATTGCTCTTGG
TTAGACCAGTATCTTCTGCGAACGGGTCAGCCCTGGCTAAGATTGGTTCGACGACAATGTTGGCTGCTATTAAAATGGAAGTAATGACACCTTCTATAGAGTCACCGGAT
GAGGGTTGCATAGCTCTTGATTTCCACATGCCTCCAATATGCTCTCCAATTGTTAGGCCTGGGAGACCAGCGGAAGCAGCACCTGTGATTTCAAAGCAGTTATCTGACAC
TATTTCGAGTTCTGGGATGATTGATCTGAGAGAACTATCTCTTGTTAAAGGAAAAGCTGCTTGGATGGCTTACTTGGATATTTACTGTTTGGACGCTGATGGATCTCTTT
TTGATGCTGCACTTCTTTCTGCAGCAGCTGCATTTTCTCATTTGCAAATCCCTGTTGTTGCTCTAAATGATGATGGAAAAGTAGTATTTGTCTCTGAGGAAGAAGGGGGA
GAAAACTTTGAGAAGGAACCTGTCAATAAAGAGAAAAGGAAACTGAAATTGAACTCTATTCCTTTCTCATTAACTTGCCTACTCCACAAGAAGTACATCTTGGCCGATCC
TACTGCAGAGGAGGAGTCCGTCATGGAAACTATTGTAACTGTTGTTTTGGATTCATCTGGTCAACTGATTTCCTTCTACAAGCCGGGTGGATCTGTTCTTGCTTATACAT
CAGCTGTTCAGGATTGTATTGCATTGACCAGACAAAGATCGAAAGAACTACAGATGATTTTAGATGAAGCAATTTCTGGTATGGAAATCGACTAA
Protein sequenceShow/hide protein sequence
MITNDEEQTIVGDENANDVQRVARSKEKGEKKEKIKEYLIADDEKVVVDDENANDLEVLLLVIKTTMKNCDTSVLLHERCGNRPPPRHSLSLSRQLSLVPSAARSRSSSA
AHYRSPAASTRCRPPIVQTMGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLAESIRPDGRALEKLETQPLLLVRPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPD
EGCIALDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVSEEEGG
ENFEKEPVNKEKRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLISFYKPGGSVLAYTSAVQDCIALTRQRSKELQMILDEAISGMEID